RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 GRIP2Q9C0E4 1043 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 WWP1Q9H0M0 922 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 SHOC2Q9UQ13 582 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 BCS1LQ9Y276 419 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 RABGAP1Q9Y3P9 1069 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 DENND3A2RUS2 1198 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 CCNT2O60583 730 aaKnown RBP8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 CD48P09326 243 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 PHBP35232 272 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 DLG4P78352 724 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 PPIDQ08752 370 aaKnown RBP8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 ACAD10Q6JQN1 1059 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 MOXD1Q6UVY6 613 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 Q6ZNX1 250 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 TSHZ1Q6ZSZ6 1077 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 CROCCP3Q8IVE0 287 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 ADGRF4Q8IZF3 695 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 TTC17Q96AE7 1141 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 FIZ1Q96SL8 496 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 ACSS3Q9H6R3 686 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 TFCP2L1Q9NZI6 479 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 ZNF148Q9UQR1 794 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 STK24Q9Y6E0 443 aa8.4□□□□□ -1.06
HMGXB4-202ENST00000418170 QSER1Q2KHR3 1735 aa8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 KANSL1LA0AUZ9 987 aa8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 TTLL13PA6NNM8 815 aa8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 PDE5AO76074 875 aa8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 ZSCAN5DPP0CG00 497 aa8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 CYP11B1P15538 503 aa8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 ARSEP51690 589 aa8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 NCKAP1LP55160 1127 aa8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 PPP3CAQ08209 521 aa8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 GPS1Q13098 491 aa8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 TFDP1Q14186 410 aa8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 KLHL38Q2WGJ6 581 aa8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 RNASEH2BQ5TBB1 312 aaKnown RBP8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 MAPKAPK5Q8IW41 473 aa8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 DCAKDQ8WVC6 231 aa8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 APOPT1Q96IL0 206 aa8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 FAM111AQ96PZ2 611 aa8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 BRD8Q9H0E9 1235 aa8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 ZNF696Q9H7X3 374 aa8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 THEGQ9P2T0 379 aa8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 JAG2Q9Y219 1238 aa8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 TDRKHQ9Y2W6 561 aaKnown RBP8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 ZNF711Q9Y462 761 aa8.4□□□□□ -1.07
HMGXB4-202ENST00000418170 TBX3O15119 743 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 LIASO43766 372 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 ATP5BP06576 529 aaKnown RBP8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 BMP3P12645 472 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 GLRA2P23416 452 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 PMLP29590 882 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 GJA8P48165 433 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 PPP4CP60510 307 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 COG7P83436 770 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 CYP4A11Q02928 519 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 ZNF720Q7Z2F6 126 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 AHI1Q8N157 1196 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 RDH13Q8NBN7 331 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 PRPF31Q8WWY3 499 aaKnown RBP8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 SHC3Q92529 594 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 KREMEN1Q96MU8 473 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 C7orf26Q96N11 449 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 GCNAQ96QF7 691 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 PARVGQ9HBI0 331 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 GPCPD1Q9NPB8 672 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 UBAP1Q9NZ09 502 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 ITGB1BP2Q9UKP3 347 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 PPME1Q9Y570 386 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 SH3PXD2BA1X283 911 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 ARHGAP42A6NI28 874 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 PRR5-ARHGAP8B1AHC4 643 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 TNFAIP8O95379 198 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 SSTR1P30872 391 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 ARHGAP8P85298 464 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 ZNF200P98182 395 aaPredicted RBP8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 CDK18Q07002 472 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 USP41Q3LFD5 358 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 CCDC92Q53HC0 331 aaPredicted RBP8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 OGFRL1Q5TC84 451 aaPredicted RBP8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 ZNF410Q86VK4 478 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 ANKMY2Q8IV38 441 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 ATP11CQ8NB49 1132 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 FAM81BQ96LP2 452 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 RBBP6Q7Z6E9 1792 aaKnown RBP8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 USP17L15C9J2P7 530 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 USP17L13C9JLJ4 530 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 USP17L11C9JVI0 530 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 USP17L18D6R9N7 530 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 USP17L22D6RA61 530 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 USP17L17D6RBQ6 530 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 USP17L19D6RCP7 530 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 USP17L20D6RJB6 530 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 WDR46O15213 610 aaKnown RBP8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 PSTPIP1O43586 416 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 GRIN3BO60391 1043 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 CDH2P19022 906 aaPredicted RBP8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 AOC1P19801 751 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 PSMD7P51665 324 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 MTTPP55157 894 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms