RNA–Protein interactions for RNA: ENST00000417572.5

SEC22C-205, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22C, Length 1,513 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-205ENST00000417572 HNRNPABQ99729 332 aaKnown RBP13.8□□□□□ -0.2
SEC22C-205ENST00000417572 MED10Q9BTT4 135 aa13.8□□□□□ -0.2
SEC22C-205ENST00000417572 HAUS4Q9H6D7 363 aa13.8□□□□□ -0.2
SEC22C-205ENST00000417572 ZNHIT6Q9NWK9 470 aaKnown RBP13.8□□□□□ -0.2
SEC22C-205ENST00000417572 NOCTQ9UK39 431 aaKnown RBP13.8□□□□□ -0.2
SEC22C-205ENST00000417572 MTMR11A4FU01 709 aa13.79□□□□□ -0.2
SEC22C-205ENST00000417572 MED7O43513 233 aa13.79□□□□□ -0.2
SEC22C-205ENST00000417572 VNN2O95498 520 aa13.79□□□□□ -0.2
SEC22C-205ENST00000417572 SERPING1P05155 500 aa13.79□□□□□ -0.2
SEC22C-205ENST00000417572 MMEP08473 750 aa13.79□□□□□ -0.2
SEC22C-205ENST00000417572 CHRNB2P17787 502 aa13.79□□□□□ -0.2
SEC22C-205ENST00000417572 ADORA2BP29275 332 aa13.79□□□□□ -0.2
SEC22C-205ENST00000417572 SMARCB1Q12824 385 aa13.79□□□□□ -0.2
SEC22C-205ENST00000417572 NFE2Q16621 373 aaPredicted RBP13.79□□□□□ -0.2
SEC22C-205ENST00000417572 ZNF697Q5TEC3 545 aa13.79□□□□□ -0.2
SEC22C-205ENST00000417572 C4orf50Q6ZRC1 276 aa13.79□□□□□ -0.2
SEC22C-205ENST00000417572 ADGRD2Q7Z7M1 963 aa13.79□□□□□ -0.2
SEC22C-205ENST00000417572 SPATA2LQ8IUW3 424 aaPredicted RBP13.79□□□□□ -0.2
SEC22C-205ENST00000417572 MRPL38Q96DV4 380 aaKnown RBP13.79□□□□□ -0.2
SEC22C-205ENST00000417572 PANX2Q96RD6 677 aa13.79□□□□□ -0.2
SEC22C-205ENST00000417572 CHP1Q99653 195 aa13.79□□□□□ -0.2
SEC22C-205ENST00000417572 RHOBTB2Q9BYZ6 727 aa13.79□□□□□ -0.2
SEC22C-205ENST00000417572 ZNF518BQ9C0D4 1074 aa13.79□□□□□ -0.2
SEC22C-205ENST00000417572 ABI2Q9NYB9 513 aaPredicted RBP13.79□□□□□ -0.2
SEC22C-205ENST00000417572 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.79□□□□□ -0.2
SEC22C-205ENST00000417572 PCDHB5Q9Y5E4 795 aa13.79□□□□□ -0.2
SEC22C-205ENST00000417572 BZW2Q9Y6E2 419 aaKnown RBP13.79□□□□□ -0.2
SEC22C-205ENST00000417572 PER2O15055 1255 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 TGM5O43548 720 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 CLASP2O75122 1294 aaKnown RBP13.78□□□□□ -0.2
SEC22C-205ENST00000417572 MICAL2O94851 1124 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 ADH1AP07327 375 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 PLEKP08567 350 aaPredicted RBP13.78□□□□□ -0.2
SEC22C-205ENST00000417572 BDNFP23560 247 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 CYP2F1P24903 491 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 GSDMDP57764 484 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 CDR2Q01850 454 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 ADCY1Q08828 1119 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 STILQ15468 1287 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 MEA1Q16626 185 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 GOLGA7BQ2TAP0 167 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 HABP4Q5JVS0 413 aaKnown RBP13.78□□□□□ -0.2
SEC22C-205ENST00000417572 TPGS2Q68CL5 300 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 LILRA6Q6PI73 481 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 LCLAT1Q6UWP7 414 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 ZNF571Q7Z3V5 609 aaPredicted RBP13.78□□□□□ -0.2
SEC22C-205ENST00000417572 RBM23Q86U06 439 aaKnown RBP13.78□□□□□ -0.2
SEC22C-205ENST00000417572 ZNF677Q86XU0 584 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 UBA3Q8TBC4 463 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 FAM161BQ96MY7 647 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 AGPAT1Q99943 283 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 SYT11Q9BT88 431 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 ARHGAP20Q9P2F6 1191 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 AFF4Q9UHB7 1163 aaKnown RBP13.78□□□□□ -0.2
SEC22C-205ENST00000417572 TSPAN16Q9UKR8 245 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 SLC27A5Q9Y2P5 690 aa13.78□□□□□ -0.2
SEC22C-205ENST00000417572 SEC24AO95486 1093 aa13.77□□□□□ -0.21
SEC22C-205ENST00000417572 SPATA31D3P0C874 917 aa13.77□□□□□ -0.21
SEC22C-205ENST00000417572 ATF2P15336 505 aa13.77□□□□□ -0.21
SEC22C-205ENST00000417572 TNFAIP3P21580 790 aa13.77□□□□□ -0.21
SEC22C-205ENST00000417572 FMO1Q01740 532 aa13.77□□□□□ -0.21
SEC22C-205ENST00000417572 CCDC173Q0VFZ6 552 aa13.77□□□□□ -0.21
SEC22C-205ENST00000417572 DUSP4Q13115 394 aa13.77□□□□□ -0.21
SEC22C-205ENST00000417572 CFAP221Q4G0U5 840 aa13.77□□□□□ -0.21
SEC22C-205ENST00000417572 TDRD12Q587J7 1177 aaKnown RBP13.77□□□□□ -0.21
SEC22C-205ENST00000417572 DENND1BQ6P3S1 775 aa13.77□□□□□ -0.21
SEC22C-205ENST00000417572 SPATA31D4Q6ZUB0 917 aa13.77□□□□□ -0.21
SEC22C-205ENST00000417572 FAM35AQ86V20 835 aa13.77□□□□□ -0.21
SEC22C-205ENST00000417572 TTC30AQ86WT1 665 aa13.77□□□□□ -0.21
SEC22C-205ENST00000417572 TTC9BQ8N6N2 239 aa13.77□□□□□ -0.21
SEC22C-205ENST00000417572 ANKRD52Q8NB46 1076 aa13.77□□□□□ -0.21
SEC22C-205ENST00000417572 SPPL2BQ8TCT7 592 aa13.77□□□□□ -0.21
SEC22C-205ENST00000417572 C2orf15Q8WU43 125 aaKnown RBP13.77□□□□□ -0.21
SEC22C-205ENST00000417572 FUBP3Q96I24 572 aaKnown RBP eCLIP13.77□□□□□ -0.21
SEC22C-205ENST00000417572 PCDHB18PQ96TA0 734 aa13.77□□□□□ -0.21
SEC22C-205ENST00000417572 PDCL3Q9H2J4 239 aa13.77□□□□□ -0.21
SEC22C-205ENST00000417572 CRISPLD1Q9H336 500 aa13.77□□□□□ -0.21
SEC22C-205ENST00000417572 TLE6Q9H808 572 aa13.77□□□□□ -0.21
SEC22C-205ENST00000417572 HESX1Q9UBX0 185 aa13.77□□□□□ -0.21
SEC22C-205ENST00000417572 PCDHGC3Q9UN70 934 aa13.77□□□□□ -0.21
SEC22C-205ENST00000417572 LAMA2P24043 3122 aaKnown RBP13.76□□□□□ -0.21
SEC22C-205ENST00000417572 M0QYV0 167 aa13.76□□□□□ -0.21
SEC22C-205ENST00000417572 AP1G2O75843 785 aa13.76□□□□□ -0.21
SEC22C-205ENST00000417572 BEST1O76090 585 aa13.76□□□□□ -0.21
SEC22C-205ENST00000417572 EIF4A3P38919 411 aaKnown RBP13.76□□□□□ -0.21
SEC22C-205ENST00000417572 CLCN4P51793 760 aa13.76□□□□□ -0.21
SEC22C-205ENST00000417572 CACNA2D1P54289 1103 aa13.76□□□□□ -0.21
SEC22C-205ENST00000417572 CDK17Q00537 523 aa13.76□□□□□ -0.21
SEC22C-205ENST00000417572 ADGRE1Q14246 886 aa13.76□□□□□ -0.21
SEC22C-205ENST00000417572 PKDCCQ504Y2 493 aa13.76□□□□□ -0.21
SEC22C-205ENST00000417572 PASD1Q8IV76 773 aa13.76□□□□□ -0.21
SEC22C-205ENST00000417572 WDTC1Q8N5D0 677 aa13.76□□□□□ -0.21
SEC22C-205ENST00000417572 OLIG1Q8TAK6 271 aa13.76□□□□□ -0.21
SEC22C-205ENST00000417572 PPP1R9BQ96SB3 815 aa13.76□□□□□ -0.21
SEC22C-205ENST00000417572 KCNK16Q96T55 309 aa13.76□□□□□ -0.21
SEC22C-205ENST00000417572 SMOQ99835 787 aa13.76□□□□□ -0.21
SEC22C-205ENST00000417572 DUSP16Q9BY84 665 aa13.76□□□□□ -0.21
SEC22C-205ENST00000417572 CYP4F11Q9HBI6 524 aa13.76□□□□□ -0.21
SEC22C-205ENST00000417572 ABCB6Q9NP58 842 aa13.76□□□□□ -0.21
SEC22C-205ENST00000417572 KRT82Q9NSB4 513 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms