RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 BRD2P25440 801 aaKnown RBP12.61□□□□□ -0.39
GABRE-202ENST00000417300 CDH5P33151 784 aaPredicted RBP12.61□□□□□ -0.39
GABRE-202ENST00000417300 AARSP49588 968 aaKnown RBP eCLIP12.61□□□□□ -0.391e-6■■■□□ 17.8
GABRE-202ENST00000417300 NDST1P52848 882 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 LILRA4P59901 499 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 NOMO3P69849 1222 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 TCEAL1Q15170 157 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 SOWAHAQ2M3V2 549 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 ZNF394Q53GI3 561 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 CLLU1OSQ5K130 101 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 ZNF569Q5MCW4 686 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 ACAD10Q6JQN1 1059 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 SLC35F6Q8N357 371 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 TRIM58Q8NG06 486 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 URGCPQ8TCY9 931 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 CTNNBL1Q8WYA6 563 aaPredicted RBP12.61□□□□□ -0.39
GABRE-202ENST00000417300 RFFLQ8WZ73 363 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 TMEM176AQ96HP8 235 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 NOX5Q96PH1 765 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 TWNKQ96RR1 684 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 WDR24Q96S15 920 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 ZSWIM1Q9BR11 485 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 NT5C1AQ9BXI3 368 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 RNF216Q9NWF9 866 aaPredicted RBP12.61□□□□□ -0.39
GABRE-202ENST00000417300 HMGXB4Q9UGU5 601 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 DNAI1Q9UI46 699 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 MTUS1Q9ULD2 1270 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 KIAA1257Q9ULG3 409 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 DUSP10Q9Y6W6 482 aa12.61□□□□□ -0.39
GABRE-202ENST00000417300 COL4A4P53420 1690 aaPredicted RBP12.61□□□□□ -0.39
GABRE-202ENST00000417300 TSC2P49815 1807 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 MYH10P35580 1976 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 KMT2EQ8IZD2 1858 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 MACROD2A1Z1Q3 448 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 TMCO5BA8MYB1 307 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 HOXA2O43364 376 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 LSM8O95777 96 aaKnown RBP12.6□□□□□ -0.39
GABRE-202ENST00000417300 POMCP01189 267 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 FTLP02792 175 aaPredicted RBP12.6□□□□□ -0.39
GABRE-202ENST00000417300 VDRP11473 427 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 WARSP23381 471 aaKnown RBP12.6□□□□□ -0.39
GABRE-202ENST00000417300 CASQ1P31415 396 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 CLCNKBP51801 687 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 NUBP1P53384 320 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 DSC1Q08554 894 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 STILQ15468 1287 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 IFI16Q16666 785 aaKnown RBP12.6□□□□□ -0.39
GABRE-202ENST00000417300 UPP1Q16831 310 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 TCTN1Q2MV58 587 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 NOMO2Q5JPE7 1267 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 CNKSR3Q6P9H4 555 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 DEFB128Q7Z7B8 93 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 APPL2Q8NEU8 664 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 SPATA18Q8TC71 538 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 KBTBD7Q8WVZ9 684 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 TFAP2BQ92481 460 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 TRIM11Q96F44 468 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 CALR3Q96L12 384 aaKnown RBP12.6□□□□□ -0.39
GABRE-202ENST00000417300 ALS2CR12Q96Q35 445 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 MRPL45Q9BRJ2 306 aaKnown RBP12.6□□□□□ -0.39
GABRE-202ENST00000417300 ZNF518BQ9C0D4 1074 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 PDCL3Q9H2J4 239 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 KANSL3Q9P2N6 904 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 PUF60Q9UHX1 559 aaKnown RBP12.6□□□□□ -0.39
GABRE-202ENST00000417300 SALL4Q9UJQ4 1053 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 GTF3C4Q9UKN8 822 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 L1RE1Q9UN81 338 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 INPP5FQ9Y2H2 1132 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 PAXBP1Q9Y5B6 917 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 PCDHGC5Q9Y5F6 944 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 CAPN6Q9Y6Q1 641 aa12.6□□□□□ -0.39
GABRE-202ENST00000417300 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.59□□□□□ -0.39
GABRE-202ENST00000417300 CASTOR2A6NHX0 329 aa12.59□□□□□ -0.39
GABRE-202ENST00000417300 HUS1O60921 280 aa12.59□□□□□ -0.39
GABRE-202ENST00000417300 MOCS3O95396 460 aa12.59□□□□□ -0.39
GABRE-202ENST00000417300 MYBL1P10243 752 aa12.59□□□□□ -0.39
GABRE-202ENST00000417300 CD19P15391 556 aa12.59□□□□□ -0.39
GABRE-202ENST00000417300 IBSPP21815 317 aaPredicted RBP12.59□□□□□ -0.39
GABRE-202ENST00000417300 NSFP46459 744 aaKnown RBP12.59□□□□□ -0.39
GABRE-202ENST00000417300 HADHBP55084 474 aaKnown RBP12.59□□□□□ -0.39
GABRE-202ENST00000417300 GPC5P78333 572 aa12.59□□□□□ -0.39
GABRE-202ENST00000417300 ZXDAP98168 799 aa12.59□□□□□ -0.39
GABRE-202ENST00000417300 PUM1Q14671 1186 aaKnown RBP eCLIP12.59□□□□□ -0.393e-11■□□□□ 8.7
GABRE-202ENST00000417300 SGO2Q562F6 1265 aa12.59□□□□□ -0.39
GABRE-202ENST00000417300 NAA35Q5VZE5 725 aa12.59□□□□□ -0.39
GABRE-202ENST00000417300 DNAAF5Q86Y56 855 aa12.59□□□□□ -0.39
GABRE-202ENST00000417300 PHF13Q86YI8 300 aaPredicted RBP12.59□□□□□ -0.39
GABRE-202ENST00000417300 NPAS4Q8IUM7 802 aa12.59□□□□□ -0.39
GABRE-202ENST00000417300 RHOT2Q8IXI1 618 aa12.59□□□□□ -0.39
GABRE-202ENST00000417300 ADGRF2Q8IZF7 708 aa12.59□□□□□ -0.39
GABRE-202ENST00000417300 CRIPAKQ8N1N5 446 aa12.59□□□□□ -0.39
GABRE-202ENST00000417300 TMEM86AQ8N2M4 240 aa12.59□□□□□ -0.39
GABRE-202ENST00000417300 ZNF592Q92610 1267 aa12.59□□□□□ -0.39
GABRE-202ENST00000417300 VWCEQ96DN2 955 aa12.59□□□□□ -0.39
GABRE-202ENST00000417300 CYFIP2Q96F07 1278 aa12.59□□□□□ -0.39
GABRE-202ENST00000417300 VCPIP1Q96JH7 1222 aa12.59□□□□□ -0.39
GABRE-202ENST00000417300 SENP8Q96LD8 212 aa12.59□□□□□ -0.39
GABRE-202ENST00000417300 NAPGQ99747 312 aaPredicted RBP12.59□□□□□ -0.39
GABRE-202ENST00000417300 DNAI2Q9GZS0 605 aa12.59□□□□□ -0.39
GABRE-202ENST00000417300 THAP2Q9H0W7 228 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms