RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 OSTM1Q86WC4 334 aa27.14■■□□□ 1.94
VEGFA-208ENST00000417285 NELFCDQ8IXH7 590 aa27.14■■□□□ 1.94
VEGFA-208ENST00000417285 TRMT2BQ96GJ1 504 aaKnown RBP27.14■■□□□ 1.94
VEGFA-208ENST00000417285 MYRFLQ96LU7 910 aa27.14■■□□□ 1.94
VEGFA-208ENST00000417285 CDH9Q9ULB4 789 aa27.14■■□□□ 1.94
VEGFA-208ENST00000417285 ZDHHC9Q9Y397 364 aa27.14■■□□□ 1.94
VEGFA-208ENST00000417285 ATP6V1DQ9Y5K8 247 aa27.14■■□□□ 1.94
VEGFA-208ENST00000417285 PTPRJQ12913 1337 aa27.14■■□□□ 1.93
VEGFA-208ENST00000417285 PRAMEF12O95522 483 aa27.13■■□□□ 1.93
VEGFA-208ENST00000417285 CHRNB1P11230 501 aa27.13■■□□□ 1.93
VEGFA-208ENST00000417285 CMA1P23946 247 aa27.13■■□□□ 1.93
VEGFA-208ENST00000417285 MAGEA11P43364 429 aa27.13■■□□□ 1.93
VEGFA-208ENST00000417285 DDR2Q16832 855 aa27.13■■□□□ 1.93
VEGFA-208ENST00000417285 KNOP1Q1ED39 458 aaKnown RBP27.13■■□□□ 1.93
VEGFA-208ENST00000417285 MON1AQ86VX9 555 aa27.13■■□□□ 1.93
VEGFA-208ENST00000417285 C12orf56Q8IXR9 622 aa27.13■■□□□ 1.93
VEGFA-208ENST00000417285 MAB21L3Q8N8X9 362 aa27.13■■□□□ 1.93
VEGFA-208ENST00000417285 GOLGA5Q8TBA6 731 aa27.13■■□□□ 1.93
VEGFA-208ENST00000417285 RUBCNQ92622 972 aa27.13■■□□□ 1.93
VEGFA-208ENST00000417285 SLC39A2Q9NP94 309 aa27.13■■□□□ 1.93
VEGFA-208ENST00000417285 USP25Q9UHP3 1055 aa27.13■■□□□ 1.93
VEGFA-208ENST00000417285 MAGED2Q9UNF1 606 aaPredicted RBP27.13■■□□□ 1.93
VEGFA-208ENST00000417285 SLC38A8A6NNN8 435 aa27.12■■□□□ 1.93
VEGFA-208ENST00000417285 SPECC1L-ADORA2AF8WAN1 911 aa27.12■■□□□ 1.93
VEGFA-208ENST00000417285 CLIC2O15247 247 aa27.12■■□□□ 1.93
VEGFA-208ENST00000417285 ACTN4O43707 911 aaKnown RBP27.12■■□□□ 1.93
VEGFA-208ENST00000417285 NOL4O94818 638 aa27.12■■□□□ 1.93
VEGFA-208ENST00000417285 DLATP10515 647 aaKnown RBP27.12■■□□□ 1.93
VEGFA-208ENST00000417285 PFKFB1P16118 471 aa27.12■■□□□ 1.93
VEGFA-208ENST00000417285 CYP2J2P51589 502 aa27.12■■□□□ 1.93
VEGFA-208ENST00000417285 CCR3P51677 355 aa27.12■■□□□ 1.93
VEGFA-208ENST00000417285 CYP24A1Q07973 514 aa27.12■■□□□ 1.93
VEGFA-208ENST00000417285 DGKKQ5KSL6 1271 aa27.12■■□□□ 1.93
VEGFA-208ENST00000417285 GRAMD1CQ8IYS0 662 aa27.12■■□□□ 1.93
VEGFA-208ENST00000417285 SUMF1Q8NBK3 374 aa27.12■■□□□ 1.93
VEGFA-208ENST00000417285 CEP295NLQ96MC4 621 aa27.12■■□□□ 1.93
VEGFA-208ENST00000417285 MMS19Q96T76 1030 aa27.12■■□□□ 1.93
VEGFA-208ENST00000417285 TDP1Q9NUW8 608 aa27.12■■□□□ 1.93
VEGFA-208ENST00000417285 OTOGLQ3ZCN5 2332 aa27.12■■□□□ 1.93
VEGFA-208ENST00000417285 TCHHQ07283 1943 aa27.12■■□□□ 1.93
VEGFA-208ENST00000417285 A0A1B0GVL5 298 aa27.11■■□□□ 1.93
VEGFA-208ENST00000417285 WARSP23381 471 aaKnown RBP27.11■■□□□ 1.93
VEGFA-208ENST00000417285 GPR15P49685 360 aa27.11■■□□□ 1.93
VEGFA-208ENST00000417285 ITPRIPL2Q3MIP1 535 aa27.11■■□□□ 1.93
VEGFA-208ENST00000417285 SPEM1Q8N4L4 309 aa27.11■■□□□ 1.93
VEGFA-208ENST00000417285 KBTBD7Q8WVZ9 684 aa27.11■■□□□ 1.93
VEGFA-208ENST00000417285 CCDC127Q96BQ5 260 aa27.11■■□□□ 1.93
VEGFA-208ENST00000417285 PAGE5Q96GU1 130 aa27.11■■□□□ 1.93
VEGFA-208ENST00000417285 ZFYVE19Q96K21 471 aa27.11■■□□□ 1.93
VEGFA-208ENST00000417285 CGRRF1Q99675 332 aa27.11■■□□□ 1.93
VEGFA-208ENST00000417285 SYT15Q9BQS2 421 aa27.11■■□□□ 1.93
VEGFA-208ENST00000417285 KIF9Q9HAQ2 790 aa27.11■■□□□ 1.93
VEGFA-208ENST00000417285 GKN1Q9NS71 199 aa27.11■■□□□ 1.93
VEGFA-208ENST00000417285 GTSE1Q9NYZ3 720 aa27.11■■□□□ 1.93
VEGFA-208ENST00000417285 MAGEC2Q9UBF1 373 aaPredicted RBP27.11■■□□□ 1.93
VEGFA-208ENST00000417285 LILRB5O75023 590 aa27.1■■□□□ 1.93
VEGFA-208ENST00000417285 CST3P01034 146 aaPredicted RBP27.1■■□□□ 1.93
VEGFA-208ENST00000417285 CTHP32929 405 aa27.1■■□□□ 1.93
VEGFA-208ENST00000417285 PSMD2Q13200 908 aa27.1■■□□□ 1.93
VEGFA-208ENST00000417285 ZNF268Q14587 947 aaPredicted RBP27.1■■□□□ 1.93
VEGFA-208ENST00000417285 SDHAF4Q5VUM1 108 aa27.1■■□□□ 1.93
VEGFA-208ENST00000417285 TXNDC8Q6A555 127 aa27.1■■□□□ 1.93
VEGFA-208ENST00000417285 VSTM1Q6UX27 236 aa27.1■■□□□ 1.93
VEGFA-208ENST00000417285 EXOC1Q9NV70 894 aa27.1■■□□□ 1.93
VEGFA-208ENST00000417285 GPR179Q6PRD1 2367 aa27.1■■□□□ 1.93
VEGFA-208ENST00000417285 TACC1O75410 805 aa27.09■■□□□ 1.93
VEGFA-208ENST00000417285 MYL1P05976 194 aa27.09■■□□□ 1.93
VEGFA-208ENST00000417285 LMO2P25791 158 aa27.09■■□□□ 1.93
VEGFA-208ENST00000417285 GNL1P36915 607 aaPredicted RBP27.09■■□□□ 1.93
VEGFA-208ENST00000417285 CXCL12P48061 93 aa27.09■■□□□ 1.93
VEGFA-208ENST00000417285 TSSK4Q6SA08 328 aa27.09■■□□□ 1.93
VEGFA-208ENST00000417285 SCN4BQ8IWT1 228 aa27.09■■□□□ 1.93
VEGFA-208ENST00000417285 SYNPOQ8N3V7 929 aa27.09■■□□□ 1.93
VEGFA-208ENST00000417285 FSIP1Q8NA03 581 aa27.09■■□□□ 1.93
VEGFA-208ENST00000417285 USP13Q92995 863 aaPredicted RBP27.09■■□□□ 1.93
VEGFA-208ENST00000417285 SPATA17Q96L03 361 aa27.09■■□□□ 1.93
VEGFA-208ENST00000417285 HINFPQ9BQA5 517 aa27.09■■□□□ 1.93
VEGFA-208ENST00000417285 FAM83CQ9BQN1 747 aa27.09■■□□□ 1.93
VEGFA-208ENST00000417285 SCAND2PQ9GZW5 306 aaPredicted RBP27.09■■□□□ 1.93
VEGFA-208ENST00000417285 SMG9Q9H0W8 520 aaKnown RBP27.09■■□□□ 1.93
VEGFA-208ENST00000417285 SNX25Q9H3E2 840 aa27.09■■□□□ 1.93
VEGFA-208ENST00000417285 HPSEQ9Y251 543 aa27.09■■□□□ 1.93
VEGFA-208ENST00000417285 EXOC3O60645 756 aa27.08■■□□□ 1.93
VEGFA-208ENST00000417285 ATP2C2O75185 946 aa27.08■■□□□ 1.93
VEGFA-208ENST00000417285 PDGFRBP09619 1106 aa27.08■■□□□ 1.93
VEGFA-208ENST00000417285 SOX9P48436 509 aa27.08■■□□□ 1.93
VEGFA-208ENST00000417285 AP3M2P53677 418 aa27.08■■□□□ 1.93
VEGFA-208ENST00000417285 AMPD2Q01433 879 aa27.08■■□□□ 1.93
VEGFA-208ENST00000417285 TRPC3Q13507 836 aa27.08■■□□□ 1.93
VEGFA-208ENST00000417285 CC2D1AQ6P1N0 951 aaPredicted RBP27.08■■□□□ 1.93
VEGFA-208ENST00000417285 TTC8Q8TAM2 541 aa27.08■■□□□ 1.93
VEGFA-208ENST00000417285 KLRC4O43908 158 aa27.07■■□□□ 1.92
VEGFA-208ENST00000417285 STAU1O95793 577 aaKnown RBP27.07■■□□□ 1.92
VEGFA-208ENST00000417285 ATICP31939 592 aa27.07■■□□□ 1.92
VEGFA-208ENST00000417285 SYKP43405 635 aa27.07■■□□□ 1.92
VEGFA-208ENST00000417285 WDR72Q3MJ13 1102 aa27.07■■□□□ 1.92
VEGFA-208ENST00000417285 MYCBPAPQ8TBZ2 947 aa27.07■■□□□ 1.92
VEGFA-208ENST00000417285 TMEM174Q8WUU8 243 aa27.07■■□□□ 1.92
VEGFA-208ENST00000417285 CHAMP1Q96JM3 812 aa27.07■■□□□ 1.92
VEGFA-208ENST00000417285 EPC1Q9H2F5 836 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms