RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 TOB1P50616 345 aaPredicted RBP12.51□□□□□ -0.41
UBR4-205ENST00000417040 GRB10Q13322 594 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 LRRC71Q8N4P6 559 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 TSPAN17Q96FV3 270 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 ISCA1Q9BUE6 129 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 IARS2Q9NSE4 1012 aaKnown RBP12.51□□□□□ -0.41
UBR4-205ENST00000417040 MTMR4Q9NYA4 1195 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 ARMCX1Q9P291 453 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 CDH2P19022 906 aaPredicted RBP12.51□□□□□ -0.41
UBR4-205ENST00000417040 RPL10AP62906 217 aaKnown RBP12.51□□□□□ -0.41
UBR4-205ENST00000417040 SYTL3Q4VX76 610 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 BNC2Q6ZN30 1099 aaPredicted RBP12.51□□□□□ -0.41
UBR4-205ENST00000417040 SEMA6AQ9H2E6 1030 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 CBX6O95503 412 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 SLC16A1P53985 500 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 ZNF543Q08ER8 600 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 TMEM132DQ14C87 1099 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 LPCAT2Q7L5N7 544 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 ADCK2Q7Z695 626 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 CHSY1Q86X52 802 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 MIEF2Q96C03 454 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 COQ7Q99807 217 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 DCLRE1BQ9H816 532 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 TMEM8AQ9HCN3 771 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 HOXC10Q9NYD6 342 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 DONSONQ9NYP3 566 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 OPLAHO14841 1288 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 HSMCR30P0CW71 290 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 CYP19A1P11511 503 aaPredicted RBP12.51□□□□□ -0.41
UBR4-205ENST00000417040 IREB2P48200 963 aaKnown RBP12.51□□□□□ -0.41
UBR4-205ENST00000417040 ZNF571Q7Z3V5 609 aaPredicted RBP12.51□□□□□ -0.41
UBR4-205ENST00000417040 SLC47A2Q86VL8 602 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 SPATA2LQ8IUW3 424 aaPredicted RBP12.51□□□□□ -0.41
UBR4-205ENST00000417040 DEFB107AQ8IZN7 70 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 TDRD5Q8NAT2 981 aaKnown RBP12.51□□□□□ -0.41
UBR4-205ENST00000417040 FLAD1Q8NFF5 587 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 ZSCAN18Q8TBC5 510 aaPredicted RBP12.51□□□□□ -0.41
UBR4-205ENST00000417040 ATP8B4Q8TF62 1192 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 TFB1MQ8WVM0 346 aaKnown RBP12.51□□□□□ -0.41
UBR4-205ENST00000417040 ZKSCAN4Q969J2 545 aaPredicted RBP12.51□□□□□ -0.41
UBR4-205ENST00000417040 LATS2Q9NRM7 1088 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 FLT1P17948 1338 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 PTPN4P29074 926 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 MTMR2Q13614 643 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 COG2Q14746 738 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 C16orf72Q14CZ0 275 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 SGSM1Q2NKQ1 1148 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 ZRANB3Q5FWF4 1079 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 SUGP1Q8IWZ8 645 aaKnown RBP12.51□□□□□ -0.41
UBR4-205ENST00000417040 RNF148Q8N7C7 305 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 DDI1Q8WTU0 396 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 ILKAPQ9H0C8 392 aaPredicted RBP12.51□□□□□ -0.41
UBR4-205ENST00000417040 NSMCE4AQ9NXX6 385 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.51□□□□□ -0.41
UBR4-205ENST00000417040 CTNNAL1Q9UBT7 734 aa12.51□□□□□ -0.41
UBR4-205ENST00000417040 C1orf232A0A0U1RR37 186 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 FGFR3P22607 806 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 SARSP49591 514 aaKnown RBP12.5□□□□□ -0.41
UBR4-205ENST00000417040 PSMD7P51665 324 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 TMC5Q6UXY8 1006 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 TSEN2Q8NCE0 465 aaKnown RBP12.5□□□□□ -0.41
UBR4-205ENST00000417040 TMEM245Q9H330 911 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 C10orf88Q9H8K7 445 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 TRIM45Q9H8W5 580 aaPredicted RBP12.5□□□□□ -0.41
UBR4-205ENST00000417040 CLCA2Q9UQC9 943 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 NAALADL1Q9UQQ1 740 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 F8VZ95 297 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 RHOBTB1O94844 696 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 YY1P25490 414 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 HSPA13P48723 471 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 CENPAP49450 140 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 CASP10Q92851 521 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 PHF21AQ96BD5 680 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 DCUN1D1Q96GG9 259 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 H2AFY2Q9P0M6 372 aaPredicted RBP12.5□□□□□ -0.41
UBR4-205ENST00000417040 ARHGAP20Q9P2F6 1191 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 CHRM3P20309 590 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 STAT5BP51692 787 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 AP3M2P53677 418 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 EMC2Q15006 297 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 PGS1Q32NB8 556 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 TTMPQ5BVD1 217 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 MASTLQ96GX5 879 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 RIPK2O43353 540 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 SUPT7LO94864 414 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 RAG1P15918 1043 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 AKT1P31749 480 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 TTLL4Q14679 1199 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 EFHC1Q5JVL4 640 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 SYN2Q92777 582 aaPredicted RBP12.5□□□□□ -0.41
UBR4-205ENST00000417040 PAIP1Q9H074 479 aaKnown RBP12.5□□□□□ -0.41
UBR4-205ENST00000417040 RSAD1Q9HA92 442 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 CAPN10Q9HC96 672 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 ASMTLO95671 621 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 MMP10P09238 476 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 FAM200BP0CF97 657 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 ALDH5A1P51649 535 aaPredicted RBP12.5□□□□□ -0.41
UBR4-205ENST00000417040 TRIM65Q6PJ69 517 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 ARHGAP22Q7Z5H3 698 aa12.5□□□□□ -0.41
UBR4-205ENST00000417040 LUZP2Q86TE4 346 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms