RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 THADAQ6YHU6 1953 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 ASCC3Q8N3C0 2202 aaKnown RBP10.1□□□□□ -0.79
LINC01238-201ENST00000416204 TSC2P49815 1807 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 C2orf78A6NCI8 922 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 TISP43B9A030 160 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 PIRO00625 290 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 HNRNPDLO14979 420 aaKnown RBP10.1□□□□□ -0.79
LINC01238-201ENST00000416204 HCRTO43612 131 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 FAM189A1O60320 539 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 CYP2F1P24903 491 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 TIE1P35590 1138 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 SLC6A11P48066 632 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 ACOT2P49753 483 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 LIG4P49917 911 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 SCAPQ12770 1279 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 GNL2Q13823 731 aaKnown RBP10.1□□□□□ -0.79
LINC01238-201ENST00000416204 TMEM132DQ14C87 1099 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 ZNF77Q15935 545 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 EMC10Q5UCC4 262 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 SCARA3Q6AZY7 606 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 ZPBP2Q6X784 338 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 LPCAT2Q7L5N7 544 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 PIP4P1Q86T03 277 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 METTL23Q86XA0 190 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 PGBD3Q8N328 593 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 ARL14EPQ8N8R7 260 aaPredicted RBP10.1□□□□□ -0.79
LINC01238-201ENST00000416204 SPRYD3Q8NCJ5 442 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 SH3RF2Q8TEC5 729 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 HNRNPLLQ8WVV9 542 aaKnown RBP10.1□□□□□ -0.79
LINC01238-201ENST00000416204 ATP2A3Q93084 1043 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 COL26A1Q96A83 441 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 CNOT6LQ96LI5 555 aaKnown RBP10.1□□□□□ -0.79
LINC01238-201ENST00000416204 MMTAG2Q9BU76 263 aaKnown RBP10.1□□□□□ -0.79
LINC01238-201ENST00000416204 MSTO1Q9BUK6 570 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 IKZF4Q9H2S9 585 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 KIF9Q9HAQ2 790 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 BCCIPQ9P287 314 aaKnown RBP eCLIP10.1□□□□□ -0.79
LINC01238-201ENST00000416204 GPSM3Q9Y4H4 160 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 NUP205Q92621 2012 aa10.1□□□□□ -0.79
LINC01238-201ENST00000416204 ANK1P16157 1881 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 TRAV19A0A0A6YYK7 116 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 SGK1O00141 431 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 XPOTO43592 962 aaKnown RBP10.09□□□□□ -0.79
LINC01238-201ENST00000416204 KLF8O95600 359 aaPredicted RBP10.09□□□□□ -0.79
LINC01238-201ENST00000416204 MUTP22033 750 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 OPRD1P41143 372 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 SMTNP53814 917 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 ATXN3P54252 364 aaPredicted RBP10.09□□□□□ -0.79
LINC01238-201ENST00000416204 KDSRQ06136 332 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 LMAN2Q12907 356 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 USP4Q13107 963 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 DHX8Q14562 1220 aaKnown RBP10.09□□□□□ -0.79
LINC01238-201ENST00000416204 CRY1Q16526 586 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 KRT79Q5XKE5 535 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 SLC39A4Q6P5W5 647 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 RASSF3Q86WH2 238 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 PROSER1Q86XN7 944 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 MARCH9Q86YJ5 346 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 THEM5Q8N1Q8 247 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 IGSF22Q8N9C0 903 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 TXNDC5Q8NBS9 432 aaKnown RBP10.09□□□□□ -0.79
LINC01238-201ENST00000416204 SPPL2BQ8TCT7 592 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 LRRC15Q8TF66 581 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 SPIRE2Q8WWL2 714 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 C8orf76Q96K31 380 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 BBC3Q96PG8 261 aaPredicted RBP10.09□□□□□ -0.79
LINC01238-201ENST00000416204 NTPCRQ9BSD7 190 aaKnown RBP10.09□□□□□ -0.79
LINC01238-201ENST00000416204 HSFX1Q9UBD0 423 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 MMP17Q9ULZ9 603 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 PCDHB6Q9Y5E3 794 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 PCDHB5Q9Y5E4 795 aa10.09□□□□□ -0.79
LINC01238-201ENST00000416204 MYO16Q9Y6X6 1858 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 TCRBV21S2A2A0A5A6 115 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 ANO9A1A5B4 782 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 K7ENM7 598 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 OGTO15294 1046 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 CYP11A1P05108 521 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 USP17L7P0C7H9 530 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 GUCY2CP25092 1073 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 DDX6P26196 483 aaKnown RBP eCLIP10.08□□□□□ -0.8
LINC01238-201ENST00000416204 P2RY2P41231 377 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 TAF6P49848 677 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 ZXDBP98169 803 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 FAM160A1Q05DH4 1040 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 SEMA3BQ13214 749 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 ANKRD1Q15327 319 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 GAB4Q2WGN9 574 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 LYSMD4Q5XG99 296 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 C12orf40Q86WS4 652 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 SYT12Q8IV01 421 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 SCN4BQ8IWT1 228 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 DCP1BQ8IZD4 617 aaKnown RBP10.08□□□□□ -0.8
LINC01238-201ENST00000416204 HDDC3Q8N4P3 179 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 OLIG1Q8TAK6 271 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 MDM1Q8TC05 714 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 EXOC4Q96A65 974 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 LRIG1Q96JA1 1093 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 PNMA5Q96PV4 448 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 C17orf75Q9HAS0 396 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 SMPD4Q9NXE4 827 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms