RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 CYP24A1Q07973 514 aa18.84■□□□□ 0.61
PDLIM2-208ENST00000416159 KNOP1Q1ED39 458 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-208ENST00000416159 SDHAF4Q5VUM1 108 aa18.84■□□□□ 0.61
PDLIM2-208ENST00000416159 C4orf50Q6ZRC1 276 aa18.84■□□□□ 0.61
PDLIM2-208ENST00000416159 RALGPS2Q86X27 583 aaPredicted RBP18.84■□□□□ 0.61
PDLIM2-208ENST00000416159 MAB21L3Q8N8X9 362 aa18.84■□□□□ 0.61
PDLIM2-208ENST00000416159 SYT15Q9BQS2 421 aa18.84■□□□□ 0.61
PDLIM2-208ENST00000416159 FAM126AQ9BYI3 521 aaPredicted RBP18.84■□□□□ 0.61
PDLIM2-208ENST00000416159 ZNF638Q14966 1978 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-208ENST00000416159 USP34Q70CQ2 3546 aa18.84■□□□□ 0.61
PDLIM2-208ENST00000416159 SLC38A8A6NNN8 435 aa18.83■□□□□ 0.6
PDLIM2-208ENST00000416159 NOL4O94818 638 aa18.83■□□□□ 0.6
PDLIM2-208ENST00000416159 CST3P01034 146 aaPredicted RBP18.83■□□□□ 0.6
PDLIM2-208ENST00000416159 MAGEA11P43364 429 aa18.83■□□□□ 0.6
PDLIM2-208ENST00000416159 LRRC32Q14392 662 aa18.83■□□□□ 0.6
PDLIM2-208ENST00000416159 PPP2R5DQ14738 602 aa18.83■□□□□ 0.6
PDLIM2-208ENST00000416159 MAPRE1Q15691 268 aaKnown RBP18.83■□□□□ 0.6
PDLIM2-208ENST00000416159 MON1AQ86VX9 555 aa18.83■□□□□ 0.6
PDLIM2-208ENST00000416159 SCN4BQ8IWT1 228 aa18.83■□□□□ 0.6
PDLIM2-208ENST00000416159 ZBTB44Q8NCP5 570 aa18.83■□□□□ 0.6
PDLIM2-208ENST00000416159 GOLGA5Q8TBA6 731 aa18.83■□□□□ 0.6
PDLIM2-208ENST00000416159 KBTBD7Q8WVZ9 684 aa18.83■□□□□ 0.6
PDLIM2-208ENST00000416159 NELL1Q92832 810 aa18.83■□□□□ 0.6
PDLIM2-208ENST00000416159 CCDC127Q96BQ5 260 aa18.83■□□□□ 0.6
PDLIM2-208ENST00000416159 TRMT2BQ96GJ1 504 aaKnown RBP18.83■□□□□ 0.6
PDLIM2-208ENST00000416159 ZFYVE19Q96K21 471 aa18.83■□□□□ 0.6
PDLIM2-208ENST00000416159 MYRFLQ96LU7 910 aa18.83■□□□□ 0.6
PDLIM2-208ENST00000416159 MMS19Q96T76 1030 aa18.83■□□□□ 0.6
PDLIM2-208ENST00000416159 KIF9Q9HAQ2 790 aa18.83■□□□□ 0.6
PDLIM2-208ENST00000416159 MAGEC2Q9UBF1 373 aaPredicted RBP18.83■□□□□ 0.6
PDLIM2-208ENST00000416159 USP25Q9UHP3 1055 aa18.83■□□□□ 0.6
PDLIM2-208ENST00000416159 EP300Q09472 2414 aaPredicted RBP18.83■□□□□ 0.6
PDLIM2-208ENST00000416159 SPECC1L-ADORA2AF8WAN1 911 aa18.82■□□□□ 0.6
PDLIM2-208ENST00000416159 HCRTO43612 131 aa18.82■□□□□ 0.6
PDLIM2-208ENST00000416159 ACTN4O43707 911 aaKnown RBP18.82■□□□□ 0.6
PDLIM2-208ENST00000416159 KLRC4O43908 158 aa18.82■□□□□ 0.6
PDLIM2-208ENST00000416159 ATP2C2O75185 946 aa18.82■□□□□ 0.6
PDLIM2-208ENST00000416159 CMA1P23946 247 aa18.82■□□□□ 0.6
PDLIM2-208ENST00000416159 LMO2P25791 158 aa18.82■□□□□ 0.6
PDLIM2-208ENST00000416159 CTHP32929 405 aa18.82■□□□□ 0.6
PDLIM2-208ENST00000416159 SOX9P48436 509 aa18.82■□□□□ 0.6
PDLIM2-208ENST00000416159 CCR3P51677 355 aa18.82■□□□□ 0.6
PDLIM2-208ENST00000416159 PSMD2Q13200 908 aa18.82■□□□□ 0.6
PDLIM2-208ENST00000416159 DGKKQ5KSL6 1271 aa18.82■□□□□ 0.6
PDLIM2-208ENST00000416159 TXNDC8Q6A555 127 aa18.82■□□□□ 0.6
PDLIM2-208ENST00000416159 GRAMD1CQ8IYS0 662 aa18.82■□□□□ 0.6
PDLIM2-208ENST00000416159 SUMF1Q8NBK3 374 aa18.82■□□□□ 0.6
PDLIM2-208ENST00000416159 PAGE5Q96GU1 130 aa18.82■□□□□ 0.6
PDLIM2-208ENST00000416159 SMG9Q9H0W8 520 aaKnown RBP18.82■□□□□ 0.6
PDLIM2-208ENST00000416159 TDP1Q9NUW8 608 aa18.82■□□□□ 0.6
PDLIM2-208ENST00000416159 GTSE1Q9NYZ3 720 aa18.82■□□□□ 0.6
PDLIM2-208ENST00000416159 EXOC3O60645 756 aa18.81■□□□□ 0.6
PDLIM2-208ENST00000416159 LILRB5O75023 590 aa18.81■□□□□ 0.6
PDLIM2-208ENST00000416159 TACC1O75410 805 aa18.81■□□□□ 0.6
PDLIM2-208ENST00000416159 PDGFRBP09619 1106 aa18.81■□□□□ 0.6
PDLIM2-208ENST00000416159 NRLP54845 237 aa18.81■□□□□ 0.6
PDLIM2-208ENST00000416159 TRPC3Q13507 836 aa18.81■□□□□ 0.6
PDLIM2-208ENST00000416159 ZNF268Q14587 947 aaPredicted RBP18.81■□□□□ 0.6
PDLIM2-208ENST00000416159 CCDC142Q17RM4 750 aa18.81■□□□□ 0.6
PDLIM2-208ENST00000416159 ITPRIPL2Q3MIP1 535 aa18.81■□□□□ 0.6
PDLIM2-208ENST00000416159 TSSK4Q6SA08 328 aa18.81■□□□□ 0.6
PDLIM2-208ENST00000416159 VSTM1Q6UX27 236 aa18.81■□□□□ 0.6
PDLIM2-208ENST00000416159 STKLD1Q8NE28 680 aa18.81■□□□□ 0.6
PDLIM2-208ENST00000416159 TTC8Q8TAM2 541 aa18.81■□□□□ 0.6
PDLIM2-208ENST00000416159 RUBCNQ92622 972 aa18.81■□□□□ 0.6
PDLIM2-208ENST00000416159 USP13Q92995 863 aaPredicted RBP18.81■□□□□ 0.6
PDLIM2-208ENST00000416159 SPATA32Q96LK8 384 aa18.81■□□□□ 0.6
PDLIM2-208ENST00000416159 CEP295NLQ96MC4 621 aa18.81■□□□□ 0.6
PDLIM2-208ENST00000416159 SNX25Q9H3E2 840 aa18.81■□□□□ 0.6
PDLIM2-208ENST00000416159 CRTAC1Q9NQ79 661 aa18.81■□□□□ 0.6
PDLIM2-208ENST00000416159 GKN1Q9NS71 199 aa18.81■□□□□ 0.6
PDLIM2-208ENST00000416159 EXOC1Q9NV70 894 aa18.81■□□□□ 0.6
PDLIM2-208ENST00000416159 GVINP1Q7Z2Y8 2422 aa18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 A0A1B0GVL5 298 aa18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 STAU1O95793 577 aaKnown RBP18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 MYL1P05976 194 aa18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 PFKFB1P16118 471 aa18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 ATICP31939 592 aa18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 GNL1P36915 607 aaPredicted RBP18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 CXCL12P48061 93 aa18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 AP3M2P53677 418 aa18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 PSMC1P62191 440 aaKnown RBP18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 TNNC1P63316 161 aa18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 KRT85P78386 507 aa18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 TNK2Q07912 1038 aa18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 STK4Q13043 487 aa18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 WDR72Q3MJ13 1102 aa18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 SPEM1Q8N4L4 309 aa18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 FSIP1Q8NA03 581 aa18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 MYCBPAPQ8TBZ2 947 aa18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 ZNF516Q92618 1163 aa18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 MYLPFQ96A32 169 aa18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 SPATA17Q96L03 361 aa18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 HINFPQ9BQA5 517 aa18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 FAM83CQ9BQN1 747 aa18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 MRPL45Q9BRJ2 306 aaKnown RBP18.8■□□□□ 0.6
PDLIM2-208ENST00000416159 PHACTR2O75167 634 aa18.79■□□□□ 0.6
PDLIM2-208ENST00000416159 TADA3O75528 432 aa18.79■□□□□ 0.6
PDLIM2-208ENST00000416159 BDNFP23560 247 aa18.79■□□□□ 0.6
PDLIM2-208ENST00000416159 GRIK1P39086 918 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms