RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 SLC39A10Q9ULF5 831 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 KAT6AQ92794 2004 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 KRT4P19013 534 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 ATG4AQ8WYN0 398 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 TSPAN17Q96FV3 270 aa11.07□□□□□ -0.64
COL12A1-203ENST00000416123 FAM205AQ6ZU69 1335 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 RHOBTB1O94844 696 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 CKMP06732 381 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 B4GALNT2Q8NHY0 566 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 RIN2Q8WYP3 895 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-203ENST00000416123 PAK5Q9P286 719 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 TRAF3IP3Q9Y228 551 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 CNTNAP2Q9UHC6 1331 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 PFDN1O60925 122 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 GCLCP48506 637 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-203ENST00000416123 SLC11A2P49281 568 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 PLIN5Q00G26 463 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 ARRDC4Q8NCT1 418 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 TPCN2Q8NHX9 752 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 CYFIP2Q96F07 1278 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 PACSIN1Q9BY11 444 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 KCTD10Q9H3F6 313 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 IL17RBQ9NRM6 502 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 SSU72P8A0A1W2PR75 194 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 F5H5T6 163 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 ZBTB39O15060 712 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 EPB42P16452 691 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 KRT72Q14CN4 511 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 ICA1LQ8NDH6 482 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 PSMC3IPQ9P2W1 217 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-203ENST00000416123 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-203ENST00000416123 H7C4K7 107 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 ATP5HO75947 161 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 PYGBP11216 843 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 MAGEA4P43358 317 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 CCDC85BQ15834 202 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-203ENST00000416123 GRIK4Q16099 956 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 TRIM48Q8IWZ4 208 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 ST13P4Q8IZP2 240 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-203ENST00000416123 IGFLR1Q9H665 355 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 GAS2O43903 313 aaKnown RBP11.06□□□□□ -0.64
COL12A1-203ENST00000416123 UBQLN1Q9UMX0 589 aaKnown RBP11.06□□□□□ -0.64
COL12A1-203ENST00000416123 DLG5Q8TDM6 1919 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 TARSL2A2RTX5 802 aaKnown RBP11.06□□□□□ -0.64
COL12A1-203ENST00000416123 ITIH2P19823 946 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 PRAMEF19Q5SWL8 479 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 ZNF669Q96BR6 464 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-203ENST00000416123 GMCL1Q96IK5 515 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 AGLP35573 1532 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 TBKBP1A7MCY6 615 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 H3BRB1 525 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 PYGLP06737 847 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 RBP3P10745 1247 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 MYL4P12829 197 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 SNRPFP62306 86 aaKnown RBP11.06□□□□□ -0.64
COL12A1-203ENST00000416123 STX3Q13277 289 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 POLD3Q15054 466 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-203ENST00000416123 AARS2Q5JTZ9 985 aaKnown RBP11.06□□□□□ -0.64
COL12A1-203ENST00000416123 C17orf80Q9BSJ5 609 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 PDGFDQ9GZP0 370 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-203ENST00000416123 FAM96AQ9H5X1 160 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 TUT1Q9H6E5 874 aaKnown RBP11.06□□□□□ -0.64
COL12A1-203ENST00000416123 TMEM161AQ9NX61 479 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 CRLS1Q9UJA2 301 aa11.06□□□□□ -0.64
COL12A1-203ENST00000416123 MYO1GB0I1T2 1018 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 AP3B1O00203 1094 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 PTGER2P43116 358 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 MYL6P60660 151 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 IFNEQ86WN2 208 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 DAGLBQ8NCG7 672 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 BRD8Q9H0E9 1235 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 PTGISQ16647 500 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 LVRNQ6Q4G3 990 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 JAMLQ86YT9 394 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 RDM1Q8NG50 284 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 SYTL5Q8TDW5 730 aaPredicted RBP11.05□□□□□ -0.64
COL12A1-203ENST00000416123 UBP1Q9NZI7 540 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.05□□□□□ -0.64
COL12A1-203ENST00000416123 CACNA1FO60840 1977 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 C5orf58C9J3I9 102 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 CNTN2Q02246 1040 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 TBC1D19Q8N5T2 526 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 DTX3LQ8TDB6 740 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 DDI1Q8WTU0 396 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 SEMA6BQ9H3T3 888 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 NMRK2Q9NPI5 230 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 MRPL40Q9NQ50 206 aaKnown RBP11.05□□□□□ -0.64
COL12A1-203ENST00000416123 DDX4Q9NQI0 724 aaKnown RBP11.05□□□□□ -0.64
COL12A1-203ENST00000416123 TCRBV5S4A2TA0A5A2 114 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 BEX3Q00994 111 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 Q4G0T1 1027 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 ZNF677Q86XU0 584 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 ARHGAP18Q8N392 663 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 EDEM1Q92611 657 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 IL1R1P14778 569 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 SHMT1P34896 483 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 ACTN3Q08043 901 aaPredicted RBP11.05□□□□□ -0.64
COL12A1-203ENST00000416123 FLOT2Q14254 428 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 TRIM65Q6PJ69 517 aa11.05□□□□□ -0.64
COL12A1-203ENST00000416123 MTBPQ96DY7 904 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms