RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 PTCD2Q8WV60 388 aaKnown RBP21.36■■□□□ 1.01
AP1S3-205ENST00000415298 HAS1Q92839 578 aa21.36■■□□□ 1.01
AP1S3-205ENST00000415298 NEUROG2Q9H2A3 272 aa21.36■■□□□ 1.01
AP1S3-205ENST00000415298 ARHGAP10A1A4S6 786 aa21.36■■□□□ 1.01
AP1S3-205ENST00000415298 CCDC160A6NGH7 325 aa21.36■■□□□ 1.01
AP1S3-205ENST00000415298 CCDC169A6NNP5 214 aa21.36■■□□□ 1.01
AP1S3-205ENST00000415298 BHMG1C9JSJ3 638 aaPredicted RBP21.36■■□□□ 1.01
AP1S3-205ENST00000415298 TRMUO75648 421 aaKnown RBP21.36■■□□□ 1.01
AP1S3-205ENST00000415298 B3GALNT1O75752 331 aa21.36■■□□□ 1.01
AP1S3-205ENST00000415298 ITGB5P18084 799 aa21.36■■□□□ 1.01
AP1S3-205ENST00000415298 RPL5P46777 297 aaKnown RBP21.36■■□□□ 1.01
AP1S3-205ENST00000415298 SHCBP1Q8NEM2 672 aa21.36■■□□□ 1.01
AP1S3-205ENST00000415298 EME1Q96AY2 570 aa21.36■■□□□ 1.01
AP1S3-205ENST00000415298 SNX25Q9H3E2 840 aa21.36■■□□□ 1.01
AP1S3-205ENST00000415298 DMTF1Q9Y222 760 aa21.36■■□□□ 1.01
AP1S3-205ENST00000415298 IGLV3-22A0A075B6J6 115 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 CYP3A7-CYP3A51PA0A087WV96 503 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 PEX14O75381 377 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 NR3C2P08235 984 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 CYP3A7P24462 503 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 CETN2P41208 172 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 PCYT1AP49585 367 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 UBXN1Q04323 297 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 PCSK7Q16549 785 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 ACSBG2Q5FVE4 666 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 PIP4K2CQ8TBX8 421 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 STMN2Q93045 179 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 MTMR9Q96QG7 549 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 WDR11Q9BZH6 1224 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 CSRNP2Q9H175 543 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 SRPRBQ9Y5M8 271 aaKnown RBP21.35■■□□□ 1.01
AP1S3-205ENST00000415298 PFASO15067 1338 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 CDK2AP1O14519 115 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 TRPA1O75762 1119 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 ARP10275 920 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 TGFB3P10600 412 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 CD44P16070 742 aaKnown RBP21.35■■□□□ 1.01
AP1S3-205ENST00000415298 DDX5P17844 614 aaKnown RBP21.35■■□□□ 1.01
AP1S3-205ENST00000415298 CTGFP29279 349 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 CIITAP33076 1130 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 CALCRLQ16602 461 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 NSUN6Q8TEA1 469 aaKnown RBP21.35■■□□□ 1.01
AP1S3-205ENST00000415298 INPP4AQ96PE3 977 aaPredicted RBP21.35■■□□□ 1.01
AP1S3-205ENST00000415298 GIN1Q9NXP7 522 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 TAB2Q9NYJ8 693 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 ANGPTL2Q9UKU9 493 aa21.35■■□□□ 1.01
AP1S3-205ENST00000415298 RGS16O15492 202 aaPredicted RBP21.34■■□□□ 1.01
AP1S3-205ENST00000415298 SH3BP5O60239 455 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 COBLO75128 1261 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 PTPN4P29074 926 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 ADORA2AP29274 412 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 CRABP2P29373 138 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 PHKG1Q16816 387 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 C15orf59Q2T9L4 293 aaPredicted RBP21.34■■□□□ 1.01
AP1S3-205ENST00000415298 ERP27Q96DN0 273 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 SNF8Q96H20 258 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 CTRCQ99895 268 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 NUP85Q9BW27 656 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 LRRC27Q9C0I9 530 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 RBM38Q9H0Z9 239 aaKnown RBP21.34■■□□□ 1.01
AP1S3-205ENST00000415298 EHD1Q9H4M9 534 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 STXBP5LQ9Y2K9 1186 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 DNAJC25-GNG10A0A024R161 153 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 FARP2O94887 1054 aaPredicted RBP21.34■■□□□ 1.01
AP1S3-205ENST00000415298 TECP42680 631 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 TUBA3CQ13748 450 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 CEP55Q53EZ4 464 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 RFWD3Q6PCD5 774 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 LILRB1Q8NHL6 650 aaPredicted RBP21.34■■□□□ 1.01
AP1S3-205ENST00000415298 DTX3LQ8TDB6 740 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 GRAMD1AQ96CP6 724 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 VMP1Q96GC9 406 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 MBOAT7Q96N66 472 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 PHF12Q96QT6 1004 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 FNBP1Q96RU3 617 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 FRMPD4Q14CM0 1322 aa21.34■■□□□ 1.01
AP1S3-205ENST00000415298 PP2D1A8MPX8 630 aa21.33■■□□□ 1.01
AP1S3-205ENST00000415298 PFDN6O15212 129 aa21.33■■□□□ 1.01
AP1S3-205ENST00000415298 S100BP04271 92 aaPredicted RBP21.33■■□□□ 1.01
AP1S3-205ENST00000415298 ENO2P09104 434 aaPredicted RBP21.33■■□□□ 1.01
AP1S3-205ENST00000415298 OR52Z1P0C646 297 aa21.33■■□□□ 1.01
AP1S3-205ENST00000415298 OCM2P0CE71 109 aa21.33■■□□□ 1.01
AP1S3-205ENST00000415298 OCMP0CE72 109 aaPredicted RBP21.33■■□□□ 1.01
AP1S3-205ENST00000415298 VSIG10LQ86VR7 867 aa21.33■■□□□ 1.01
AP1S3-205ENST00000415298 CDK5RAP3Q96JB5 506 aa21.33■■□□□ 1.01
AP1S3-205ENST00000415298 PKD2L1Q9P0L9 805 aa21.33■■□□□ 1.01
AP1S3-205ENST00000415298 SERTAD1Q9UHV2 236 aa21.33■■□□□ 1.01
AP1S3-205ENST00000415298 MSH4O15457 936 aa21.33■■□□□ 1
AP1S3-205ENST00000415298 ZNF12P17014 697 aa21.33■■□□□ 1
AP1S3-205ENST00000415298 CDH3P22223 829 aa21.33■■□□□ 1
AP1S3-205ENST00000415298 DSTYKQ6XUX3 929 aa21.33■■□□□ 1
AP1S3-205ENST00000415298 ARHGAP39Q9C0H5 1083 aa21.33■■□□□ 1
AP1S3-205ENST00000415298 EHMT1Q9H9B1 1298 aa21.33■■□□□ 1
AP1S3-205ENST00000415298 KLHL3Q9UH77 587 aa21.33■■□□□ 1
AP1S3-205ENST00000415298 FOXD2O60548 495 aaPredicted RBP21.32■■□□□ 1
AP1S3-205ENST00000415298 RGS20O76081 388 aa21.32■■□□□ 1
AP1S3-205ENST00000415298 NUDT17P0C025 328 aa21.32■■□□□ 1
AP1S3-205ENST00000415298 PCSK6P29122 969 aa21.32■■□□□ 1
AP1S3-205ENST00000415298 PPARGP37231 505 aaPredicted RBP21.32■■□□□ 1
AP1S3-205ENST00000415298 POLGP54098 1239 aaPredicted RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms