RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 KPNA1P52294 538 aaPredicted RBP13.35□□□□□ -0.27
NCKIPSD-203ENST00000415281 LPAL2Q16609 132 aa13.35□□□□□ -0.27
NCKIPSD-203ENST00000415281 CNNM4Q6P4Q7 775 aa13.35□□□□□ -0.27
NCKIPSD-203ENST00000415281 MON1AQ86VX9 555 aa13.35□□□□□ -0.27
NCKIPSD-203ENST00000415281 YAF2Q8IY57 180 aa13.35□□□□□ -0.27
NCKIPSD-203ENST00000415281 DCP1BQ8IZD4 617 aaKnown RBP13.35□□□□□ -0.27
NCKIPSD-203ENST00000415281 GPD1LQ8N335 351 aa13.35□□□□□ -0.27
NCKIPSD-203ENST00000415281 CELF5Q8N6W0 485 aaKnown RBP13.35□□□□□ -0.27
NCKIPSD-203ENST00000415281 FAM200AQ8TCP9 573 aa13.35□□□□□ -0.27
NCKIPSD-203ENST00000415281 MSANTD3Q96H12 275 aa13.35□□□□□ -0.27
NCKIPSD-203ENST00000415281 TMEM30AQ9NV96 361 aa13.35□□□□□ -0.27
NCKIPSD-203ENST00000415281 GCNT4Q9P109 453 aa13.35□□□□□ -0.27
NCKIPSD-203ENST00000415281 ITGA11Q9UKX5 1188 aa13.35□□□□□ -0.27
NCKIPSD-203ENST00000415281 EXOC7Q9UPT5 735 aa13.35□□□□□ -0.27
NCKIPSD-203ENST00000415281 SNX9Q9Y5X1 595 aa13.35□□□□□ -0.27
NCKIPSD-203ENST00000415281 PPP6R2O75170 966 aa13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 ME1P48163 572 aa13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 ATXN1P54253 815 aaKnown RBP13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 RBP5P82980 135 aa13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 BFSP1Q12934 665 aa13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 PUM1Q14671 1186 aaKnown RBP eCLIP13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 ITPRIPL2Q3MIP1 535 aa13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 CFAP221Q4G0U5 840 aa13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 ARHGAP15Q53QZ3 475 aa13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 TMEM196Q5HYL7 178 aa13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 DGKKQ5KSL6 1271 aa13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 ATL3Q6DD88 541 aa13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 SYCP3Q8IZU3 236 aa13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 TMEM86AQ8N2M4 240 aa13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 TOP6BLQ8N6T0 577 aa13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 PLEKHO2Q8TD55 490 aa13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 CACTINQ8WUQ7 758 aaKnown RBP13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 TRMT2BQ96GJ1 504 aaKnown RBP13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 ZNF560Q96MR9 790 aa13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 EBF3Q9H4W6 596 aa13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 TMEM206Q9H813 350 aa13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 ABCB6Q9NP58 842 aa13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 TDP1Q9NUW8 608 aa13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 NCDNQ9UBB6 729 aa13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 NCOR2Q9Y618 2525 aa13.34□□□□□ -0.27
NCKIPSD-203ENST00000415281 SOBPA7XYQ1 873 aa13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 DPYSL4O14531 572 aa13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 TRDMT1O14717 391 aaKnown RBP13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 HUS1O60921 280 aa13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 HOXA6P31267 233 aa13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 TXLNAP40222 546 aa13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 GALK1P51570 392 aa13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 CACNA2D1P54289 1103 aa13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 USP46P62068 366 aa13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 NUCB2P80303 420 aa13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 ALCAMQ13740 583 aa13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 RUNX3Q13761 415 aa13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 VEPH1Q14D04 833 aa13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 NFE2Q16621 373 aaPredicted RBP13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 SCFD1Q8WVM8 642 aa13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 C7orf25Q9BPX7 421 aa13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 HINFPQ9BQA5 517 aa13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 MRPL45Q9BRJ2 306 aaKnown RBP13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 TNMDQ9H2S6 317 aa13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 HSPBP1Q9NZL4 362 aa13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 RCOR1Q9UKL0 485 aa13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 PCDHA7Q9UN72 937 aa13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 MAGED2Q9UNF1 606 aaPredicted RBP13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 RALGAPA1Q6GYQ0 2036 aa13.33□□□□□ -0.28
NCKIPSD-203ENST00000415281 C2orf78A6NCI8 922 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 CUTAO60888 179 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 EGFP01133 1207 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 KRT19P08727 400 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 CSH1P0DML2 217 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 CSH2P0DML3 217 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 NRLP54845 237 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 PSMC1P62191 440 aaKnown RBP13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 KRT85P78386 507 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 PLCB2Q00722 1185 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 TSPY1Q01534 308 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 SPEM2Q0P670 501 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 ZNF268Q14587 947 aaPredicted RBP13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 ZNF77Q15935 545 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 GAB4Q2WGN9 574 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 C1orf228Q6PIY5 440 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 DPH6Q7L8W6 267 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 TRAPPC11Q7Z392 1133 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 DGLUCYQ7Z3D6 616 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 LONP2Q86WA8 852 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 CCDC65Q8IXS2 484 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 ADGRF2Q8IZF7 708 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 SPATA18Q8TC71 538 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 DHX58Q96C10 678 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 HPDLQ96IR7 371 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 LINC00597Q9H2U6 94 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 AGPAT3Q9NRZ7 376 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 ATP6V1DQ9Y5K8 247 aa13.32□□□□□ -0.28
NCKIPSD-203ENST00000415281 ZNF233A6NK53 670 aa13.31□□□□□ -0.28
NCKIPSD-203ENST00000415281 CLIC2O15247 247 aa13.31□□□□□ -0.28
NCKIPSD-203ENST00000415281 KLRC4O43908 158 aa13.31□□□□□ -0.28
NCKIPSD-203ENST00000415281 CHRM1P11229 460 aaPredicted RBP13.31□□□□□ -0.28
NCKIPSD-203ENST00000415281 WARSP23381 471 aaKnown RBP13.31□□□□□ -0.28
NCKIPSD-203ENST00000415281 DDX6P26196 483 aaKnown RBP eCLIP13.31□□□□□ -0.28
NCKIPSD-203ENST00000415281 GJA4P35212 333 aa13.31□□□□□ -0.28
NCKIPSD-203ENST00000415281 MAGEA11P43364 429 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms