RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 CSNK1G1Q9HCP0 422 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 ABCB6Q9NP58 842 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 NGRNQ9NPE2 291 aaKnown RBP14.11□□□□□ -0.15
CNN3-203ENST00000415017 TLR9Q9NR96 1032 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 HSFX1Q9UBD0 423 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 GTF3C4Q9UKN8 822 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 MAFFQ9ULX9 164 aa14.11□□□□□ -0.15
CNN3-203ENST00000415017 C2orf71A6NGG8 1288 aa14.1□□□□□ -0.15
CNN3-203ENST00000415017 EPOPA6NHQ4 379 aa14.1□□□□□ -0.15
CNN3-203ENST00000415017 URODP06132 367 aa14.1□□□□□ -0.15
CNN3-203ENST00000415017 MMEP08473 750 aa14.1□□□□□ -0.15
CNN3-203ENST00000415017 GZMAP12544 262 aa14.1□□□□□ -0.15
CNN3-203ENST00000415017 UNGP13051 313 aaPredicted RBP14.1□□□□□ -0.15
CNN3-203ENST00000415017 BRD2P25440 801 aaKnown RBP14.1□□□□□ -0.15
CNN3-203ENST00000415017 EIF4A3P38919 411 aaKnown RBP14.1□□□□□ -0.15
CNN3-203ENST00000415017 GPD2P43304 727 aa14.1□□□□□ -0.15
CNN3-203ENST00000415017 PSMC1P62191 440 aaKnown RBP14.1□□□□□ -0.15
CNN3-203ENST00000415017 TSPY1Q01534 308 aa14.1□□□□□ -0.15
CNN3-203ENST00000415017 ROR1Q01973 937 aa14.1□□□□□ -0.15
CNN3-203ENST00000415017 ARID5AQ03989 594 aa14.1□□□□□ -0.15
CNN3-203ENST00000415017 GPM6BQ13491 265 aa14.1□□□□□ -0.15
CNN3-203ENST00000415017 NFE2Q16621 373 aaPredicted RBP14.1□□□□□ -0.15
CNN3-203ENST00000415017 TSR1Q2NL82 804 aaKnown RBP14.1□□□□□ -0.15
CNN3-203ENST00000415017 TPGS2Q68CL5 300 aa14.1□□□□□ -0.15
CNN3-203ENST00000415017 TTC30AQ86WT1 665 aa14.1□□□□□ -0.15
CNN3-203ENST00000415017 PALB2Q86YC2 1186 aa14.1□□□□□ -0.15
CNN3-203ENST00000415017 DCP1BQ8IZD4 617 aaKnown RBP14.1□□□□□ -0.15
CNN3-203ENST00000415017 ANKRD52Q8NB46 1076 aa14.1□□□□□ -0.15
CNN3-203ENST00000415017 C2orf15Q8WU43 125 aaKnown RBP14.1□□□□□ -0.15
CNN3-203ENST00000415017 HEXIM2Q96MH2 286 aaKnown RBP14.1□□□□□ -0.15
CNN3-203ENST00000415017 UBXN6Q9BZV1 441 aa14.1□□□□□ -0.15
CNN3-203ENST00000415017 NHEJ1Q9H9Q4 299 aaPredicted RBP14.1□□□□□ -0.15
CNN3-203ENST00000415017 MRPL17Q9NRX2 175 aaKnown RBP14.1□□□□□ -0.15
CNN3-203ENST00000415017 TMEM30AQ9NV96 361 aa14.1□□□□□ -0.15
CNN3-203ENST00000415017 ZNHIT6Q9NWK9 470 aaKnown RBP14.1□□□□□ -0.15
CNN3-203ENST00000415017 CDY1Q9Y6F8 540 aa14.1□□□□□ -0.15
CNN3-203ENST00000415017 REV3LO60673 3130 aa14.1□□□□□ -0.15
CNN3-203ENST00000415017 A0A087X0T9 212 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 WDR27A2RRH5 827 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 ZNF263O14978 683 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 TEX28O15482 410 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 THAP12O43422 761 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 MED7O43513 233 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 CLSTN1O94985 981 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 PAPLNO95428 1278 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 LSM8O95777 96 aaKnown RBP14.09□□□□□ -0.15
CNN3-203ENST00000415017 CNPP09543 421 aaKnown RBP14.09□□□□□ -0.15
CNN3-203ENST00000415017 OR4Q2P0C623 313 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 FAM228BP0C875 321 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 OR1D2P34982 312 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 MAGEA11P43364 429 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 NDUFV1P49821 464 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 SMC1AQ14683 1233 aaKnown RBP14.09□□□□□ -0.15
CNN3-203ENST00000415017 SLC18A3Q16572 532 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 MDH1BQ5I0G3 518 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 KIAA1841Q6NSI8 718 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 RAD9BQ6WBX8 426 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 TRIM72Q6ZMU5 477 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 ZNF461Q8TAF7 563 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 SLC2A14Q8TDB8 520 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 STK32AQ8WU08 396 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 SLC35F5Q8WV83 523 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 MYLPFQ96A32 169 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 KLHL5Q96PQ7 755 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 TCF25Q9BQ70 676 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 DUSP16Q9BY84 665 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 ZNF518BQ9C0D4 1074 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 ISCUQ9H1K1 167 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 TSPAN16Q9UKR8 245 aa14.09□□□□□ -0.15
CNN3-203ENST00000415017 DENND4CQ5VZ89 1909 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 MTMR11A4FU01 709 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 EIF3CLB5ME19 914 aaKnown RBP14.08□□□□□ -0.16
CNN3-203ENST00000415017 MICAL2O94851 1124 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 CXCL14O95715 111 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 SETSIPP0DME0 302 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 CCDC130P13994 396 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 ATF2P15336 505 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 CD19P15391 556 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 POU3F3P20264 500 aaPredicted RBP14.08□□□□□ -0.16
CNN3-203ENST00000415017 IRS1P35568 1242 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 NOMO3P69849 1222 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 CENPCQ03188 943 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 SLC39A12Q504Y0 691 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 DENND1BQ6P3S1 775 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 VSTM1Q6UX27 236 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 RNF19BQ6ZMZ0 732 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 C4orf50Q6ZRC1 276 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 TMC7Q7Z402 723 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 FAM35AQ86V20 835 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 GPIHBP1Q8IV16 184 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 GLYCTKQ8IVS8 523 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 ZMIZ2Q8NF64 920 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 SPPL2BQ8TCT7 592 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 AUTS2Q8WXX7 1259 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 EIF3CQ99613 913 aaKnown RBP14.08□□□□□ -0.16
CNN3-203ENST00000415017 CRISPLD1Q9H336 500 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 CYLDQ9NQC7 956 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 FAM49BQ9NUQ9 324 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 AFF4Q9UHB7 1163 aaKnown RBP14.08□□□□□ -0.16
CNN3-203ENST00000415017 ADAMTS1Q9UHI8 967 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms