RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 SPAG17Q6Q759 2223 aa13.09□□□□□ -0.31
LIMS2-210ENST00000413578 MYH11P35749 1972 aa13.09□□□□□ -0.31
LIMS2-210ENST00000413578 BCLAF3A2AJT9 711 aaKnown RBP13.08□□□□□ -0.32
LIMS2-210ENST00000413578 GABRDO14764 452 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 DCLK1O15075 740 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 IL18RAPO95256 599 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 APBB3O95704 486 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 KRT18P05783 430 aaKnown RBP13.08□□□□□ -0.32
LIMS2-210ENST00000413578 CHRM1P11229 460 aaPredicted RBP13.08□□□□□ -0.32
LIMS2-210ENST00000413578 CYP2F1P24903 491 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 GJB2P29033 226 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 DDIT3P35638 169 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 RPL10AP62906 217 aaKnown RBP13.08□□□□□ -0.32
LIMS2-210ENST00000413578 KCNA1Q09470 495 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 DMC1Q14565 340 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 CFAP221Q4G0U5 840 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 CC2D1AQ6P1N0 951 aaPredicted RBP13.08□□□□□ -0.32
LIMS2-210ENST00000413578 LIMS2Q7Z4I7 341 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 OSTM1Q86WC4 334 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 BRSK2Q8IWQ3 736 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 CPA6Q8N4T0 437 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 ZSWIM2Q8NEG5 633 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 SPATA18Q8TC71 538 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 CD101Q93033 1021 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 ACDQ96AP0 544 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 HVCN1Q96D96 273 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 CYP2S1Q96SQ9 504 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 ZHX3Q9H4I2 956 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 DUS2Q9NX74 493 aaKnown RBP13.08□□□□□ -0.32
LIMS2-210ENST00000413578 GDAP2Q9NXN4 497 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 MAGED2Q9UNF1 606 aaPredicted RBP13.08□□□□□ -0.32
LIMS2-210ENST00000413578 CACNA1GO43497 2377 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 FAM208BQ5VWN6 2430 aa13.08□□□□□ -0.32
LIMS2-210ENST00000413578 RALGAPA1Q6GYQ0 2036 aa13.07□□□□□ -0.32
LIMS2-210ENST00000413578 BMP15O95972 392 aa13.07□□□□□ -0.32
LIMS2-210ENST00000413578 POLR2BP30876 1174 aaKnown RBP13.07□□□□□ -0.32
LIMS2-210ENST00000413578 POSTNQ15063 836 aa13.07□□□□□ -0.32
LIMS2-210ENST00000413578 GAB4Q2WGN9 574 aa13.07□□□□□ -0.32
LIMS2-210ENST00000413578 RNF43Q68DV7 783 aa13.07□□□□□ -0.32
LIMS2-210ENST00000413578 RASSF3Q86WH2 238 aa13.07□□□□□ -0.32
LIMS2-210ENST00000413578 SFR1Q86XK3 245 aa13.07□□□□□ -0.32
LIMS2-210ENST00000413578 TMEM86AQ8N2M4 240 aa13.07□□□□□ -0.32
LIMS2-210ENST00000413578 LRRC52Q8N7C0 313 aa13.07□□□□□ -0.32
LIMS2-210ENST00000413578 POMGNT1Q8WZA1 660 aa13.07□□□□□ -0.32
LIMS2-210ENST00000413578 ATP2A3Q93084 1043 aa13.07□□□□□ -0.32
LIMS2-210ENST00000413578 FUBP3Q96I24 572 aaKnown RBP eCLIP13.07□□□□□ -0.32
LIMS2-210ENST00000413578 TMX3Q96JJ7 454 aa13.07□□□□□ -0.32
LIMS2-210ENST00000413578 EDEM2Q9BV94 578 aa13.07□□□□□ -0.32
LIMS2-210ENST00000413578 TMEM121BQ9BXQ6 578 aaPredicted RBP13.07□□□□□ -0.32
LIMS2-210ENST00000413578 DDX43Q9NXZ2 648 aaKnown RBP13.07□□□□□ -0.32
LIMS2-210ENST00000413578 WNT6Q9Y6F9 365 aa13.07□□□□□ -0.32
LIMS2-210ENST00000413578 IGF2RP11717 2491 aa13.07□□□□□ -0.32
LIMS2-210ENST00000413578 ANK1P16157 1881 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 LNP1A1A4G5 178 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 HCRTO43612 131 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 RHOBTB1O94844 696 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 CD2BP2O95400 341 aaKnown RBP13.06□□□□□ -0.32
LIMS2-210ENST00000413578 CAVIN2O95810 425 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 ITGB3P05106 788 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 NEFLP07196 543 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 PROS1P07225 676 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 USP17L7P0C7H9 530 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 ACAT1P24752 427 aaKnown RBP13.06□□□□□ -0.32
LIMS2-210ENST00000413578 ZXDBP98169 803 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 RABEP1Q15276 862 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 ELF2Q15723 593 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 C8orf34Q49A92 452 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 ERICH6BQ5W0A0 696 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 PMS2CLQ68D20 193 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 PSAPL1Q6NUJ1 521 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 FAM171BQ6P995 826 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 USP49Q70CQ1 688 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 SH3RF2Q8TEC5 729 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 USP33Q8TEY7 942 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 EXOC4Q96A65 974 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 DNAJC19Q96DA6 116 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 FAM84AQ96KN4 292 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 SEL1LQ9UBV2 794 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 SIX4Q9UIU6 781 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 GTF3C4Q9UKN8 822 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 ARHGAP26Q9UNA1 814 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 AGAP1Q9UPQ3 857 aa13.06□□□□□ -0.32
LIMS2-210ENST00000413578 EML5Q05BV3 1969 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 ZFYVE26Q68DK2 2539 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 TRAV19A0A0A6YYK7 116 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 C2orf78A6NCI8 922 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 ANTXRLA6NF34 631 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 H3BQV1 296 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 K7EQS6 105 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 HUS1O60921 280 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 CKMP06732 381 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 OPRD1P41143 372 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 MAGEA11P43364 429 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 IFNAR2P48551 515 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 TFAMQ00059 246 aaKnown RBP13.05□□□□□ -0.32
LIMS2-210ENST00000413578 MYL7Q01449 175 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 CREB5Q02930 508 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 SOWAHAQ2M3V2 549 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 L1TD1Q5T7N2 865 aaKnown RBP13.05□□□□□ -0.32
LIMS2-210ENST00000413578 TOP6BLQ8N6T0 577 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms