RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 SKA1Q96BD8 255 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 NDNQ99608 321 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 STRA6Q9BX79 667 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 ASCC2Q9H1I8 757 aaPredicted RBP9.36□□□□□ -0.91
SIK3-202ENST00000413553 ADARB2Q9NS39 739 aaKnown RBP9.36□□□□□ -0.91
SIK3-202ENST00000413553 NDE1Q9NXR1 346 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 MTO1Q9Y2Z2 717 aaKnown RBP9.36□□□□□ -0.91
SIK3-202ENST00000413553 A8MXQ7 604 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 FCHO1O14526 889 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 SLC16A4O15374 487 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 CREB3O43889 395 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 GRIN3BO60391 1043 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 LPXNO60711 386 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 PHBP35232 272 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 SPP2Q13103 211 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 HIF1AQ16665 826 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.36□□□□□ -0.91
SIK3-202ENST00000413553 HAUS6Q7Z4H7 955 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 ARHGAP18Q8N392 663 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 ITFG2Q969R8 447 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 TRIM11Q96F44 468 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 FAM84AQ96KN4 292 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 NR1H4Q96RI1 486 aaPredicted RBP9.36□□□□□ -0.91
SIK3-202ENST00000413553 CENPKQ9BS16 269 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 TEKT3Q9BXF9 490 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 MMADHCQ9H3L0 296 aaPredicted RBP9.36□□□□□ -0.91
SIK3-202ENST00000413553 AVENQ9NQS1 362 aaPredicted RBP9.36□□□□□ -0.91
SIK3-202ENST00000413553 RAB20Q9NX57 234 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 PGAP2Q9UHJ9 254 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 SYNPO2Q9UMS6 1093 aa9.36□□□□□ -0.91
SIK3-202ENST00000413553 G3BP2Q9UN86 482 aaKnown RBP9.36□□□□□ -0.91
SIK3-202ENST00000413553 TM9SF1O15321 606 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 USP1O94782 785 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 KRT1P04264 644 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 UNGP13051 313 aaPredicted RBP9.35□□□□□ -0.91
SIK3-202ENST00000413553 ANPEPP15144 967 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 BGNP21810 368 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 RTP1P59025 263 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 NFX1Q12986 1120 aaKnown RBP9.35□□□□□ -0.91
SIK3-202ENST00000413553 MTMR2Q13614 643 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 MORF4L2Q15014 288 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 RASA2Q15283 850 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 EAPPQ56P03 285 aaPredicted RBP9.35□□□□□ -0.91
SIK3-202ENST00000413553 EFHC2Q5JST6 749 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 LIN9Q5TKA1 542 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 ALYREFQ86V81 257 aaKnown RBP9.35□□□□□ -0.91
SIK3-202ENST00000413553 SESTD1Q86VW0 696 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 OPTNQ96CV9 577 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 DTNBP1Q96EV8 351 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 OXNAD1Q96HP4 312 aaPredicted RBP9.35□□□□□ -0.91
SIK3-202ENST00000413553 FNBP1Q96RU3 617 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 IWS1Q96ST2 819 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 WDR11Q9BZH6 1224 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 RANBP17Q9H2T7 1088 aaKnown RBP9.35□□□□□ -0.91
SIK3-202ENST00000413553 ALOX15BO15296 676 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 TLR3O15455 904 aaKnown RBP9.35□□□□□ -0.91
SIK3-202ENST00000413553 OPHN1O60890 802 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 ARP10275 920 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 RARBP10826 455 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 GLRA2P23416 452 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 ARL4CP56559 192 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 PEX3P56589 373 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 GPX6P59796 221 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 MAP3K10Q02779 954 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 KDSRQ06136 332 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 ALCAMQ13740 583 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 KATNAL2Q8IYT4 538 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 SLC25A41Q8N5S1 370 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 EXD1Q8NHP7 514 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 ACSF2Q96CM8 615 aaPredicted RBP9.35□□□□□ -0.91
SIK3-202ENST00000413553 CLPTM1LQ96KA5 538 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 FAM111AQ96PZ2 611 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 ECSITQ9BQ95 431 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 TMEM121Q9BTD3 319 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 SPATA16Q9BXB7 569 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 NMUR2Q9GZQ4 415 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 VPS11Q9H270 941 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 PPCSQ9HAB8 311 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 TMEM8AQ9HCN3 771 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 GINM1Q9NU53 330 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 FBXO28Q9NVF7 368 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 ZHX2Q9Y6X8 837 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 FAM237BA0A1B0GVD1 139 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 CYP1A1P04798 512 aaPredicted RBP9.35□□□□□ -0.91
SIK3-202ENST00000413553 AP2B1P63010 937 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 GAD2Q05329 585 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 TTLL12Q14166 644 aaPredicted RBP9.35□□□□□ -0.91
SIK3-202ENST00000413553 LRRC36Q1X8D7 754 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 C1orf146Q5VVC0 180 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 RIPOR1Q6ZS17 1223 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 C3orf62Q6ZUJ4 267 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 NLRX1Q86UT6 975 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 RHPN2Q8IUC4 686 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 SCUBE1Q8IWY4 988 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 ST13P4Q8IZP2 240 aaPredicted RBP9.35□□□□□ -0.91
SIK3-202ENST00000413553 CPXCR1Q8N123 301 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 ALLCQ8N6M5 410 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 ATP11CQ8NB49 1132 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 THTPAQ9BU02 230 aa9.35□□□□□ -0.91
SIK3-202ENST00000413553 OCEL1Q9H607 264 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms