RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 RMDN1Q96DB5 314 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 CFAP36Q96G28 342 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 CCDC114Q96M63 670 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 RAB3IPQ96QF0 476 aaPredicted RBP6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 MAK16Q9BXY0 300 aaKnown RBP6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 KRT23Q9C075 422 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 MROH8Q9H579 483 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 SNX15Q9NRS6 342 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 KCNH7Q9NS40 1196 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 TBC1D23Q9NUY8 699 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 PLA2G3Q9NZ20 509 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 LPAR3Q9UBY5 353 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 ADGRE2Q9UHX3 823 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 TMPRSS11EQ9UL52 423 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 EXOC7Q9UPT5 735 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 DYRK1BQ9Y463 629 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 NUMBLQ9Y6R0 609 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 TNIKQ9UKE5 1360 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 SPAG9O60271 1321 aaKnown RBP6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 GPR75-ASB3A0A0A6YYF3 556 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 ST20-MTHFSA0A0A6YYL1 179 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 A0A1W2PQ09 198 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 MEIS1O00470 390 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 IKBKBO14920 756 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 WDR46O15213 610 aaKnown RBP6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 RRP9O43818 475 aaKnown RBP6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 NEMFO60524 1076 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 PHF2O75151 1096 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 SIN3BO75182 1162 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 RTN2O75298 545 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 KRT38O76015 456 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 WFS1O76024 890 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 CCNDBP1O95273 360 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 OLFM2O95897 454 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 UBL4AP11441 157 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 IFNGR1P15260 489 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 KCNA5P22460 613 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 GGCXP38435 758 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 ASMTP46597 345 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 CAPZA2P47755 286 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 BCAT1P54687 386 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 HDAC4P56524 1084 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 PSMC6P62333 389 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 RPA4Q13156 261 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 DCTN2Q13561 401 aaKnown RBP6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 TNFAIP1Q13829 316 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 CAVIN4Q5BKX8 364 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 FIGNQ5HY92 759 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 PLEKHS1Q5SXH7 462 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 MCTP1Q6DN14 999 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 KRT80Q6KB66 452 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 CAVIN1Q6NZI2 390 aaKnown RBP6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 FAM83HQ6ZRV2 1179 aaPredicted RBP6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 USP49Q70CQ1 688 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 TUSC5Q8IXB3 177 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 GALNT4Q8N4A0 578 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 VGLL2Q8N8G2 317 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 GPR150Q8NGU9 434 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 OR6B3Q8NGW1 331 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 METTL6Q8TCB7 284 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 ZNF384Q8TF68 577 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 SCFD2Q8WU76 684 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 SLC22A17Q8WUG5 538 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 RNF141Q8WVD5 230 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 KBTBD7Q8WVZ9 684 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 WNT8BQ93098 351 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 CLPTM1LQ96KA5 538 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 C1orf74Q96LT6 269 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 RBM15Q96T37 977 aaKnown RBP eCLIP6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 MMP19Q99542 508 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 FUZQ9BT04 418 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 JAM3Q9BX67 310 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 TEX12Q9BXU0 123 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 TRIM54Q9BYV2 358 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 OSBPL6Q9BZF3 934 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 FOXQ1Q9C009 403 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 CDIP1Q9H305 208 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 SMARCAD1Q9H4L7 1026 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 TASP1Q9H6P5 420 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 RC3H2Q9HBD1 1191 aaKnown RBP6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 CHST7Q9NS84 486 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 CLDND1Q9NY35 253 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 SUCLA2Q9P2R7 463 aaPredicted RBP6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 ZNF212Q9UDV6 495 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 CPSF3Q9UKF6 684 aaKnown RBP6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 DNAJC16Q9Y2G8 782 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 PCDHA1Q9Y5I3 950 aa6.27□□□□□ -1.41
CBX1P3-201ENST00000413296 RNF103-CHMP3A0A140T963 221 aa6.26□□□□□ -1.41
CBX1P3-201ENST00000413296 LINC00854A0A1B0GVQ3 168 aa6.26□□□□□ -1.41
CBX1P3-201ENST00000413296 CTAGE9A4FU28 777 aa6.26□□□□□ -1.41
CBX1P3-201ENST00000413296 RNF103O00237 685 aa6.26□□□□□ -1.41
CBX1P3-201ENST00000413296 SIGLEC6O43699 453 aa6.26□□□□□ -1.41
CBX1P3-201ENST00000413296 CAMTA2O94983 1202 aa6.26□□□□□ -1.41
CBX1P3-201ENST00000413296 FTCDO95954 541 aa6.26□□□□□ -1.41
CBX1P3-201ENST00000413296 LRG1P02750 347 aa6.26□□□□□ -1.41
CBX1P3-201ENST00000413296 PDHBP11177 359 aa6.26□□□□□ -1.41
CBX1P3-201ENST00000413296 COL6A2P12110 1019 aa6.26□□□□□ -1.41
CBX1P3-201ENST00000413296 TMEM11P17152 192 aa6.26□□□□□ -1.41
CBX1P3-201ENST00000413296 NFKBIAP25963 317 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms