RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 KPNB1Q14974 876 aaKnown RBP18.5■□□□□ 0.55
SDCBP-202ENST00000413219 DLGAP5Q15398 846 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 PPP1R15BQ5SWA1 713 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 FNBP1LQ5T0N5 605 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 PPFIBP2Q8ND30 876 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 FBXO36Q8NEA4 188 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 ZFAND2BQ8WV99 257 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 ZNF606Q8WXB4 792 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 SCG3Q8WXD2 468 aaKnown RBP18.5■□□□□ 0.55
SDCBP-202ENST00000413219 ATP6V0A1Q93050 837 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 MCEEQ96PE7 176 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.5■□□□□ 0.55
SDCBP-202ENST00000413219 SCOCQ9UIL1 159 aa18.5■□□□□ 0.55
SDCBP-202ENST00000413219 AGO2Q9UKV8 859 aaKnown RBP18.5■□□□□ 0.55
SDCBP-202ENST00000413219 IQANK1A0A1B0GTG1 560 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 GOLGA8SH3BPF8 625 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 GOLGA8MH3BSY2 632 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 KRT36O76013 467 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 MT-ND3P03897 115 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 DLDP09622 509 aaKnown RBP18.49■□□□□ 0.55
SDCBP-202ENST00000413219 ETV4P43268 484 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 SOX10P56693 466 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 NLRP11P59045 1033 aaKnown RBP18.49■□□□□ 0.55
SDCBP-202ENST00000413219 SLC18A2Q05940 514 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 PTPRJQ12913 1337 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 RBBP5Q15291 538 aaKnown RBP18.49■□□□□ 0.55
SDCBP-202ENST00000413219 MSS51Q4VC12 460 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 ANKRD22Q5VYY1 191 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 AP1ARQ63HQ0 302 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 OR52E8Q6IFG1 317 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 XRRA1Q6P2D8 792 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 DCUN1D2Q6PH85 259 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 RHPN2Q8IUC4 686 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 PALM2Q8IXS6 379 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 UBR7Q8N806 425 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 NRG4Q8WWG1 115 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 PTPRN2Q92932 1015 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 STMN2Q93045 179 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 HAUS1Q96CS2 278 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 APOPT1Q96IL0 206 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 CYTH2Q99418 400 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 CGRRF1Q99675 332 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 PDCD2LQ9BRP1 358 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 ADAM33Q9BZ11 813 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 ZNF518BQ9C0D4 1074 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 XPNPEP1Q9NQW7 623 aa18.49■□□□□ 0.55
SDCBP-202ENST00000413219 PAPOLBQ9NRJ5 636 aaKnown RBP18.49■□□□□ 0.55
SDCBP-202ENST00000413219 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.49■□□□□ 0.55
SDCBP-202ENST00000413219 SPDYE2BA6NHP3 402 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 CAPN9O14815 690 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 KLF11O14901 512 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 ZNF862O60290 1169 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 LPXNO60711 386 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 SNUPNO95149 360 aaKnown RBP18.48■□□□□ 0.55
SDCBP-202ENST00000413219 SPDYE6P0CI01 402 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 RARBP10826 455 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 ESRRAP11474 423 aaPredicted RBP18.48■□□□□ 0.55
SDCBP-202ENST00000413219 MYCLP12524 364 aaPredicted RBP18.48■□□□□ 0.55
SDCBP-202ENST00000413219 SERPINB3P29508 390 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 WNT7BP56706 349 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 ROR2Q01974 943 aaKnown RBP18.48■□□□□ 0.55
SDCBP-202ENST00000413219 CWF19L1Q69YN2 538 aaKnown RBP18.48■□□□□ 0.55
SDCBP-202ENST00000413219 LRRC6Q86X45 466 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 IFT43Q96FT9 208 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 TRAPPC9Q96Q05 1148 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 WDR83Q9BRX9 315 aaKnown RBP18.48■□□□□ 0.55
SDCBP-202ENST00000413219 TAS2R1Q9NYW7 299 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 DLGAP2Q9P1A6 1054 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 NUB1Q9Y5A7 615 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 LTBP4Q8N2S1 1624 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 C3orf70A6NLC5 250 aaPredicted RBP18.48■□□□□ 0.55
SDCBP-202ENST00000413219 PLSCR1O15162 318 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 LDHAP00338 332 aaKnown RBP18.48■□□□□ 0.55
SDCBP-202ENST00000413219 PIGRP01833 764 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 HMGB2P26583 209 aaKnown RBP18.48■□□□□ 0.55
SDCBP-202ENST00000413219 SSTR3P32745 418 aaPredicted RBP18.48■□□□□ 0.55
SDCBP-202ENST00000413219 RAP1GDS1P52306 607 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 SESN3P58005 492 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 OGDHQ02218 1023 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 RCN2Q14257 317 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 THEMIS2Q5TEJ8 643 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 TXNRD3NBQ6F5E7 133 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 SMYD5Q6GMV2 418 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 SLFN12LQ6IEE8 588 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 RINLQ6ZS11 566 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 BBS12Q6ZW61 710 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 PDIK1LQ8N165 341 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 ZBTB10Q96DT7 871 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 PXMP2Q9NR77 195 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 GABBR1Q9UBS5 961 aa18.48■□□□□ 0.55
SDCBP-202ENST00000413219 MAGEC1O60732 1142 aa18.47■□□□□ 0.55
SDCBP-202ENST00000413219 TBX10O75333 385 aa18.47■□□□□ 0.55
SDCBP-202ENST00000413219 RPL22P35268 128 aaKnown RBP18.47■□□□□ 0.55
SDCBP-202ENST00000413219 RPS6P62753 249 aaKnown RBP18.47■□□□□ 0.55
SDCBP-202ENST00000413219 OTUD4Q01804 1114 aaKnown RBP18.47■□□□□ 0.55
SDCBP-202ENST00000413219 TAZQ16635 292 aa18.47■□□□□ 0.55
SDCBP-202ENST00000413219 GALNT15Q8N3T1 639 aa18.47■□□□□ 0.55
SDCBP-202ENST00000413219 TMEM35BQ8NCS4 154 aa18.47■□□□□ 0.55
SDCBP-202ENST00000413219 ACTL9Q8TC94 416 aa18.47■□□□□ 0.55
SDCBP-202ENST00000413219 OXNAD1Q96HP4 312 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms