RNA–Protein interactions for RNA: ENST00000412922.6

COPS7B-209, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 5

Gene COPS7B, Length 1,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-209ENST00000412922 TXLNAP40222 546 aa13.09□□□□□ -0.31
COPS7B-209ENST00000412922 UBE2HP62256 183 aa13.09□□□□□ -0.31
COPS7B-209ENST00000412922 TNK2Q07912 1038 aa13.09□□□□□ -0.31
COPS7B-209ENST00000412922 DMWDQ09019 674 aa13.09□□□□□ -0.31
COPS7B-209ENST00000412922 ALCAMQ13740 583 aa13.09□□□□□ -0.31
COPS7B-209ENST00000412922 RUNX3Q13761 415 aa13.09□□□□□ -0.31
COPS7B-209ENST00000412922 ZNF268Q14587 947 aaPredicted RBP13.09□□□□□ -0.31
COPS7B-209ENST00000412922 WDR44Q5JSH3 913 aa13.09□□□□□ -0.31
COPS7B-209ENST00000412922 WSCD1Q658N2 575 aa13.09□□□□□ -0.31
COPS7B-209ENST00000412922 LARP1BQ659C4 914 aaKnown RBP13.09□□□□□ -0.31
COPS7B-209ENST00000412922 CC2D1AQ6P1N0 951 aaPredicted RBP13.09□□□□□ -0.31
COPS7B-209ENST00000412922 TMEM86AQ8N2M4 240 aa13.09□□□□□ -0.31
COPS7B-209ENST00000412922 FAM160A2Q8N612 972 aaPredicted RBP13.09□□□□□ -0.31
COPS7B-209ENST00000412922 TTC8Q8TAM2 541 aa13.09□□□□□ -0.31
COPS7B-209ENST00000412922 GAB3Q8WWW8 586 aa13.09□□□□□ -0.31
COPS7B-209ENST00000412922 CNTNAP3BQ96NU0 1288 aa13.09□□□□□ -0.31
COPS7B-209ENST00000412922 LRRC3BQ96PB8 259 aa13.09□□□□□ -0.31
COPS7B-209ENST00000412922 CNTNAP3Q9BZ76 1288 aa13.09□□□□□ -0.31
COPS7B-209ENST00000412922 FAM53CQ9NYF3 392 aa13.09□□□□□ -0.31
COPS7B-209ENST00000412922 SPAG17Q6Q759 2223 aa13.09□□□□□ -0.31
COPS7B-209ENST00000412922 ANKRD63C9JTQ0 380 aa13.08□□□□□ -0.32
COPS7B-209ENST00000412922 LDHAP00338 332 aaKnown RBP13.08□□□□□ -0.32
COPS7B-209ENST00000412922 LIMK1P53667 647 aa13.08□□□□□ -0.32
COPS7B-209ENST00000412922 NLRP12P59046 1061 aa13.08□□□□□ -0.32
COPS7B-209ENST00000412922 RPL10AP62906 217 aaKnown RBP13.08□□□□□ -0.32
COPS7B-209ENST00000412922 MYL7Q01449 175 aa13.08□□□□□ -0.32
COPS7B-209ENST00000412922 PDGFRLQ15198 375 aa13.08□□□□□ -0.32
COPS7B-209ENST00000412922 FBXO43Q4G163 708 aa13.08□□□□□ -0.32
COPS7B-209ENST00000412922 TMEM196Q5HYL7 178 aa13.08□□□□□ -0.32
COPS7B-209ENST00000412922 PPM1JQ5JR12 505 aa13.08□□□□□ -0.32
COPS7B-209ENST00000412922 SFR1Q86XK3 245 aa13.08□□□□□ -0.32
COPS7B-209ENST00000412922 EFCAB13Q8IY85 973 aa13.08□□□□□ -0.32
COPS7B-209ENST00000412922 LRRC52Q8N7C0 313 aa13.08□□□□□ -0.32
COPS7B-209ENST00000412922 GIPC2Q8TF65 315 aa13.08□□□□□ -0.32
COPS7B-209ENST00000412922 LRRC15Q8TF66 581 aa13.08□□□□□ -0.32
COPS7B-209ENST00000412922 CACTINQ8WUQ7 758 aaKnown RBP13.08□□□□□ -0.32
COPS7B-209ENST00000412922 FAM83CQ9BQN1 747 aa13.08□□□□□ -0.32
COPS7B-209ENST00000412922 SLC46A2Q9BY10 475 aa13.08□□□□□ -0.32
COPS7B-209ENST00000412922 TDP1Q9NUW8 608 aa13.08□□□□□ -0.32
COPS7B-209ENST00000412922 SLC8A2Q9UPR5 921 aa13.08□□□□□ -0.32
COPS7B-209ENST00000412922 TRDMT1O14717 391 aaKnown RBP13.07□□□□□ -0.32
COPS7B-209ENST00000412922 HUS1O60921 280 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 RPP40O75818 363 aaKnown RBP13.07□□□□□ -0.32
COPS7B-209ENST00000412922 PPP1R37O75864 691 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 EPN2O95208 641 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 DRD1P21728 446 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 SF3A1Q15459 793 aaKnown RBP13.07□□□□□ -0.32
COPS7B-209ENST00000412922 AASDHQ4L235 1098 aaPredicted RBP13.07□□□□□ -0.32
COPS7B-209ENST00000412922 ZC2HC1CQ53FD0 456 aaPredicted RBP13.07□□□□□ -0.32
COPS7B-209ENST00000412922 IL31Q6EBC2 164 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 ZNF720Q7Z2F6 126 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 CACNA2D4Q7Z3S7 1137 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 BRSK2Q8IWQ3 736 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 CPA6Q8N4T0 437 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 CAMKK1Q8N5S9 505 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 MAB21L3Q8N8X9 362 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 C12orf50Q8NA57 414 aaPredicted RBP13.07□□□□□ -0.32
COPS7B-209ENST00000412922 ZNF397Q8NF99 534 aaPredicted RBP13.07□□□□□ -0.32
COPS7B-209ENST00000412922 KIF18AQ8NI77 898 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 CCDC26Q8TAB7 109 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 TSC1Q92574 1164 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 TRMT2BQ96GJ1 504 aaKnown RBP13.07□□□□□ -0.32
COPS7B-209ENST00000412922 ACBD6Q9BR61 282 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 TMEM206Q9H813 350 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 MRPL44Q9H9J2 332 aaKnown RBP13.07□□□□□ -0.32
COPS7B-209ENST00000412922 GKN1Q9NS71 199 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 ITGA11Q9UKX5 1188 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 PCDHGA5Q9Y5G8 931 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 HELZP42694 1942 aaKnown RBP13.07□□□□□ -0.32
COPS7B-209ENST00000412922 F11P03951 625 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 CCDC192P0DO97 292 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 SRSF5Q13243 272 aaKnown RBP13.07□□□□□ -0.32
COPS7B-209ENST00000412922 MON1AQ86VX9 555 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 GPIHBP1Q8IV16 184 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 USP13Q92995 863 aaPredicted RBP13.07□□□□□ -0.32
COPS7B-209ENST00000412922 ACDQ96AP0 544 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 ACCSQ96QU6 501 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 HPS4Q9NQG7 708 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 OLFML3Q9NRN5 406 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 KIAA1549LQ6ZVL6 1849 aa13.07□□□□□ -0.32
COPS7B-209ENST00000412922 TISP43B9A030 160 aa13.06□□□□□ -0.32
COPS7B-209ENST00000412922 HMGA1P17096 107 aaKnown RBP13.06□□□□□ -0.32
COPS7B-209ENST00000412922 GARTP22102 1010 aa13.06□□□□□ -0.32
COPS7B-209ENST00000412922 PCSK1P29120 753 aa13.06□□□□□ -0.32
COPS7B-209ENST00000412922 PDE6CP51160 858 aa13.06□□□□□ -0.32
COPS7B-209ENST00000412922 TFAMQ00059 246 aaKnown RBP13.06□□□□□ -0.32
COPS7B-209ENST00000412922 CACNA1BQ00975 2339 aa13.06□□□□□ -0.32
COPS7B-209ENST00000412922 FAM160A1Q05DH4 1040 aa13.06□□□□□ -0.32
COPS7B-209ENST00000412922 INTS6LQ5JSJ4 861 aaKnown RBP13.06□□□□□ -0.32
COPS7B-209ENST00000412922 CRELD2Q6UXH1 353 aaPredicted RBP13.06□□□□□ -0.32
COPS7B-209ENST00000412922 LRRTM3Q86VH5 581 aa13.06□□□□□ -0.32
COPS7B-209ENST00000412922 FUBP3Q96I24 572 aaKnown RBP eCLIP13.06□□□□□ -0.32
COPS7B-209ENST00000412922 FUCA2Q9BTY2 467 aa13.06□□□□□ -0.32
COPS7B-209ENST00000412922 SMG9Q9H0W8 520 aaKnown RBP13.06□□□□□ -0.32
COPS7B-209ENST00000412922 EBF3Q9H4W6 596 aa13.06□□□□□ -0.32
COPS7B-209ENST00000412922 RBAKQ9NYW8 714 aaPredicted RBP13.06□□□□□ -0.32
COPS7B-209ENST00000412922 KIAA0391O15091 583 aaKnown RBP13.05□□□□□ -0.32
COPS7B-209ENST00000412922 EXTL3O43909 919 aa13.05□□□□□ -0.32
COPS7B-209ENST00000412922 NOL4O94818 638 aa13.05□□□□□ -0.32
COPS7B-209ENST00000412922 ITGB3P05106 788 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms