RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 KRT40Q6A162 431 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 GALNT17Q6IS24 598 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 MTHFD1LQ6UB35 978 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 TSHZ1Q6ZSZ6 1077 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 TRMT1LQ7Z2T5 733 aaKnown RBP5.87□□□□□ -1.47
LINC00342-201ENST00000412393 FAM177A1Q8N128 213 aaPredicted RBP5.87□□□□□ -1.47
LINC00342-201ENST00000412393 CARFQ8N187 725 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 NME8Q8N427 588 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 TBCKQ8TEA7 893 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 GDPD5Q8WTR4 605 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 ATXN2LQ8WWM7 1075 aaKnown RBP5.87□□□□□ -1.47
LINC00342-201ENST00000412393 SLC5A5Q92911 643 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 TOP1MTQ969P6 601 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 LENG9Q96B70 501 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 ZSCAN31Q96LW9 406 aaPredicted RBP5.87□□□□□ -1.47
LINC00342-201ENST00000412393 YME1L1Q96TA2 773 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 RIT2Q99578 217 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 MENTQ9BUN1 341 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 TEKT3Q9BXF9 490 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 CELF4Q9BZC1 486 aaKnown RBP5.87□□□□□ -1.47
LINC00342-201ENST00000412393 TSPYL1Q9H0U9 437 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 AGO3Q9H9G7 860 aaKnown RBP5.87□□□□□ -1.47
LINC00342-201ENST00000412393 TMEM51Q9NW97 253 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 GABBR1Q9UBS5 961 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 TPCN1Q9ULQ1 816 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.87□□□□□ -1.47
LINC00342-201ENST00000412393 SQORQ9Y6N5 450 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 STK36Q9NRP7 1315 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 COL4A6Q14031 1691 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 ARID2Q68CP9 1835 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 IGSF9BQ9UPX0 1349 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 KDM3AQ9Y4C1 1321 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 CCDC194A0A1B0GVG4 234 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 A0A1W2PQ27 194 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 A0A1W2PQ64 194 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 A0A1W2PQC6 194 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 A0A1W2PQD8 194 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 CCDC66A2RUB6 948 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 KIF2AO00139 706 aaPredicted RBP5.86□□□□□ -1.47
LINC00342-201ENST00000412393 ENPP3O14638 875 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 ATP8B1O43520 1251 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 CHMP2AO43633 222 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 LPXNO60711 386 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 DTNBO60941 627 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 TDP2O95551 362 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 PLA2G1BP04054 148 aaKnown RBP5.86□□□□□ -1.47
LINC00342-201ENST00000412393 NCAM1P13591 858 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 C6P13671 934 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 XBP1P17861 261 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 TACR2P21452 398 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 SFNP31947 248 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 JAK3P52333 1124 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 MRPS5P82675 430 aaKnown RBP5.86□□□□□ -1.47
LINC00342-201ENST00000412393 PAK2Q13177 524 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 CAMK2GQ13555 558 aaPredicted RBP5.86□□□□□ -1.47
LINC00342-201ENST00000412393 KIR3DS1Q14943 382 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 NONOQ15233 471 aaKnown RBP eCLIP5.86□□□□□ -1.47
LINC00342-201ENST00000412393 TERF2Q15554 542 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 NPY5RQ15761 445 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 INF2Q27J81 1249 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 Q4G0T1 1027 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 LRCH2Q5VUJ6 765 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 SARM1Q6SZW1 724 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 MOXD1Q6UVY6 613 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 BNC2Q6ZN30 1099 aaPredicted RBP5.86□□□□□ -1.47
LINC00342-201ENST00000412393 USP51Q70EK9 711 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 MIER3Q7Z3K6 550 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 RTN4RL1Q86UN2 441 aaPredicted RBP5.86□□□□□ -1.47
LINC00342-201ENST00000412393 KIAA0319LQ8IZA0 1049 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 FIBCD1Q8N539 461 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 DVL3Q92997 716 aaPredicted RBP5.86□□□□□ -1.47
LINC00342-201ENST00000412393 GJA10Q969M2 543 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 FAM167AQ96KS9 214 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 ASB2Q96Q27 587 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 C17orf80Q9BSJ5 609 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 FTHL17Q9BXU8 183 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 UNC45AQ9H3U1 944 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 CHST7Q9NS84 486 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 IMPACTQ9P2X3 320 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 ORC3Q9UBD5 711 aaPredicted RBP5.86□□□□□ -1.47
LINC00342-201ENST00000412393 PADI3Q9ULW8 664 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 KCNJ14Q9UNX9 436 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 GINS2Q9Y248 185 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 TLR6Q9Y2C9 796 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 DUSP10Q9Y6W6 482 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 UNC80Q8N2C7 3258 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 TRANK1O15050 2925 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 CUL9Q8IWT3 2517 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 NCOR1O75376 2440 aa5.86□□□□□ -1.47
LINC00342-201ENST00000412393 PLXNA4Q9HCM2 1894 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 ADGRA3Q8IWK6 1321 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 CYP3A7-CYP3A51PA0A087WV96 503 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 MAGEB2O15479 319 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 RPS6KA5O75582 802 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 PSMD10O75832 226 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 UBOX5O94941 541 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 LARGE1O95461 756 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 CTDNEP1O95476 244 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 C22orf31O95567 290 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 PLATP00750 562 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms