RNA–Protein interactions for RNA: ENST00000410666.1

RNU2-49P-201, Transcript of RNA, U2 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU2-49P, Length 184 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-49P-201ENST00000410666 ZEB1P37275 1124 aaPredicted RBP3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 STAT1P42224 750 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 PTDSS1P48651 473 aaKnown RBP3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 MAN2A2P49641 1150 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 BCAT1P54687 386 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 LOXL3P58215 753 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 BPIFB4P59827 614 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 PSMC1P62191 440 aaKnown RBP3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 KRT17Q04695 432 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 ADAM15Q13444 863 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 ATP1A4Q13733 1029 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 USP10Q14694 798 aaKnown RBP3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 IQCB1Q15051 598 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 PCOLCEQ15113 449 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 GPR68Q15743 365 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 MEA1Q16626 185 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 TBRG1Q3YBR2 411 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 TRIM60Q495X7 471 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 PLA1AQ53H76 456 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 AGBL4Q5VU57 503 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 ATG16L1Q676U5 607 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 PLAG1Q6DJT9 500 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 ZNF529Q6P280 563 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 PDXDC1Q6P996 788 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 C16orf54Q6UWD8 224 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 ANKS1BQ7Z6G8 1248 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 ANKRD23Q86SG2 305 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 USP37Q86T82 979 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 CMTM4Q8IZR5 234 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 REPS2Q8NFH8 660 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 TDRD7Q8NHU6 1098 aaKnown RBP3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 ZFP28Q8NHY6 868 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 ABHD5Q8WTS1 349 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 TBC1D22AQ8WUA7 517 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 ST8SIA4Q92187 359 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 RRP36Q96EU6 259 aaKnown RBP3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 FAM227BQ96M60 508 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 ZSWIM3Q96MP5 696 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 GORASP1Q9BQQ3 440 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 REXO4Q9GZR2 422 aaKnown RBP3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 RSPH9Q9H1X1 276 aaPredicted RBP3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 SLC25A32Q9H2D1 315 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 PRKRIP1Q9H875 184 aaPredicted RBP3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 UNKLQ9H9P5 680 aaKnown RBP3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 SMYD2Q9NRG4 433 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 MBNL3Q9NUK0 354 aaKnown RBP3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 ING3Q9NXR8 418 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 ZMYND8Q9ULU4 1186 aaPredicted RBP3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 SUFUQ9UMX1 484 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 GPR34Q9UPC5 381 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 DERAQ9Y315 318 aa3.18□□□□□ -1.9
RNU2-49P-201ENST00000410666 A0A087WZ62 844 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 CCDC78A2IDD5 438 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 PI4KAP2A4QPH2 592 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 CXorf49A8MYA2 514 aaPredicted RBP3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 BIN1O00499 593 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 PCDH17O14917 1159 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 RRP9O43818 475 aaKnown RBP3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 SEMA7AO75326 666 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 TIPRLO75663 272 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 PIAS2O75928 621 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 TSPAN9O75954 239 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 USP1O94782 785 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 GFPT2O94808 682 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 LARGE1O95461 756 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 RNASE1P07998 156 aaKnown RBP3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 GLI1P08151 1106 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 HSPA1AP0DMV8 641 aaKnown RBP3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 HSPA1BP0DMV9 641 aaKnown RBP3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 CKBP12277 381 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 ITGB5P18084 799 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 SERPINA4P29622 427 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 ATICP31939 592 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 VIPR1P32241 457 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 PHKA1P46020 1223 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 CD97P48960 835 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 PNLIPRP1P54315 467 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 NR1H2P55055 460 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 CASP6P55212 293 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 CLRN1P58418 232 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 MRPL49Q13405 166 aaKnown RBP3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 CUL4BQ13620 913 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 CSHL1Q14406 222 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 RPS6KA2Q15349 733 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 SMAD1Q15797 465 aaKnown RBP3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 BAK1Q16611 211 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 ZNF792Q3KQV3 632 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 TMTC4Q5T4D3 741 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 CFAP58Q5T655 872 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 TTC22Q5TAA0 569 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 MFSD4BQ5TF39 518 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 FCRL6Q6DN72 434 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 DGAT2L7PQ6IED9 249 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 ACAD10Q6JQN1 1059 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 TMCO3Q6UWJ1 677 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 LAYNQ6UX15 382 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 SPOCD1Q6ZMY3 1216 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 CCDC129Q6ZRS4 1044 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 Q6ZUG5 572 aa3.17□□□□□ -1.9
RNU2-49P-201ENST00000410666 USP30Q70CQ3 517 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms