RNA–Protein interactions for RNA: ENST00000410604.1

RNU2-39P-201, Transcript of RNA, U2 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU2-39P, Length 198 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-39P-201ENST00000410604 ZNF518BQ9C0D4 1074 aa4.01□□□□□ -1.77
RNU2-39P-201ENST00000410604 R3HDMLQ9H3Y0 253 aa4.01□□□□□ -1.77
RNU2-39P-201ENST00000410604 PRDM13Q9H4Q3 707 aa4.01□□□□□ -1.77
RNU2-39P-201ENST00000410604 ZNF287Q9HBT7 754 aa4.01□□□□□ -1.77
RNU2-39P-201ENST00000410604 SACM1LQ9NTJ5 587 aa4.01□□□□□ -1.77
RNU2-39P-201ENST00000410604 COL20A1Q9P218 1284 aa4.01□□□□□ -1.77
RNU2-39P-201ENST00000410604 AFF4Q9UHB7 1163 aaKnown RBP4.01□□□□□ -1.77
RNU2-39P-201ENST00000410604 OGDHLQ9ULD0 1010 aa4.01□□□□□ -1.77
RNU2-39P-201ENST00000410604 PAXBP1Q9Y5B6 917 aa4.01□□□□□ -1.77
RNU2-39P-201ENST00000410604 A0A0B4J269 797 aa4□□□□□ -1.77
RNU2-39P-201ENST00000410604 TMEM233B4DJY2 109 aa4□□□□□ -1.77
RNU2-39P-201ENST00000410604 MYO1CO00159 1063 aa4□□□□□ -1.77
RNU2-39P-201ENST00000410604 ATXN1LP0C7T5 689 aaKnown RBP4□□□□□ -1.77
RNU2-39P-201ENST00000410604 SRGNP10124 158 aa4□□□□□ -1.77
RNU2-39P-201ENST00000410604 ITGAMP11215 1152 aa4□□□□□ -1.77
RNU2-39P-201ENST00000410604 CYP2C9P11712 490 aa4□□□□□ -1.77
RNU2-39P-201ENST00000410604 PIK3CBP42338 1070 aa4□□□□□ -1.77
RNU2-39P-201ENST00000410604 NDUFV1P49821 464 aa4□□□□□ -1.77
RNU2-39P-201ENST00000410604 WNT3P56703 355 aa4□□□□□ -1.77
RNU2-39P-201ENST00000410604 TUBB3Q13509 450 aa4□□□□□ -1.77
RNU2-39P-201ENST00000410604 PREPLQ4J6C6 727 aaPredicted RBP4□□□□□ -1.77
RNU2-39P-201ENST00000410604 C3orf38Q5JPI3 329 aa4□□□□□ -1.77
RNU2-39P-201ENST00000410604 C11orf96Q7Z7L8 435 aa4□□□□□ -1.77
RNU2-39P-201ENST00000410604 CCDC146Q8IYE0 955 aa4□□□□□ -1.77
RNU2-39P-201ENST00000410604 FAM9AQ8IZU1 332 aaPredicted RBP4□□□□□ -1.77
RNU2-39P-201ENST00000410604 FAM109AQ8N4B1 249 aa4□□□□□ -1.77
RNU2-39P-201ENST00000410604 SSH3Q8TE77 659 aa4□□□□□ -1.77
RNU2-39P-201ENST00000410604 PTCD3Q96EY7 689 aaKnown RBP4□□□□□ -1.77
RNU2-39P-201ENST00000410604 MOGAT1Q96PD6 335 aa4□□□□□ -1.77
RNU2-39P-201ENST00000410604 OSBPL9Q96SU4 736 aa4□□□□□ -1.77
RNU2-39P-201ENST00000410604 MESP1Q9BRJ9 268 aa4□□□□□ -1.77
RNU2-39P-201ENST00000410604 TTYH3Q9C0H2 523 aa4□□□□□ -1.77
RNU2-39P-201ENST00000410604 A1CFQ9NQ94 594 aaKnown RBP4□□□□□ -1.77
RNU2-39P-201ENST00000410604 TBCCD1Q9NVR7 557 aa4□□□□□ -1.77
RNU2-39P-201ENST00000410604 SYBUQ9NX95 663 aa4□□□□□ -1.77
RNU2-39P-201ENST00000410604 RHPN2P1A8MT19 583 aa3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 F5H697 171 aa3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 TRIAP1O43715 76 aa3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 XRCC6P12956 609 aaKnown RBP eCLIP3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 ZKSCAN1P17029 563 aaPredicted RBP3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 ITGALP20701 1170 aa3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 LOXL3P58215 753 aa3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 LILRA4P59901 499 aa3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 RPS16P62249 146 aaKnown RBP3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 BLOC1S1P78537 153 aa3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 TAP1Q03518 808 aa3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 SF3B3Q15393 1217 aaKnown RBP3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 SLC44A4Q53GD3 710 aa3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 ZNF362Q5T0B9 420 aaPredicted RBP3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 LCE1AQ5T7P2 110 aa3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 TMEM108Q6UXF1 575 aa3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 Q6YL49 198 aa3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 RD3Q7Z3Z2 195 aa3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 GAS2L3Q86XJ1 694 aa3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 MPP5Q8N3R9 675 aa3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 OR56A3Q8NH54 315 aa3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 SLC30A5Q8TAD4 765 aa3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 Q96MF0 132 aa3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 STRBPQ96SI9 672 aaKnown RBP3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 UNKQ9C0B0 810 aaKnown RBP3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 AMBRA1Q9C0C7 1298 aa3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 RGS17Q9UGC6 210 aaPredicted RBP3.99□□□□□ -1.77
RNU2-39P-201ENST00000410604 MAST3O60307 1309 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 CCDC194A0A1B0GVG4 234 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 MBD3L4A6NDZ8 208 aaPredicted RBP3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 MBD3L3A6NE82 208 aaPredicted RBP3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 F8W8V4 182 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 PYCARD-AS1I3L0S3 204 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 FOXN3O00409 490 aaPredicted RBP3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 PROM1O43490 865 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 NBPF7P0C2Y1 421 aaPredicted RBP3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 PPP3CBP16298 524 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 PXNP49023 591 aaPredicted RBP3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 HNRNPMP52272 730 aaKnown RBP eCLIP3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 RBM20Q5T481 1227 aaKnown RBP3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 VPS53Q5VIR6 699 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 DCAF12L1Q5VU92 463 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 IL31Q6EBC2 164 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 VWA1Q6PCB0 445 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 LAYNQ6UX15 382 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 ZNF280BQ86YH2 543 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 LCORLQ8N3X6 602 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 LINC00476Q8WZB0 136 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 LPIN2Q92539 896 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 COQ10AQ96MF6 247 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 NELL2Q99435 816 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 PTDSS2Q9BVG9 487 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 MS4A7Q9GZW8 240 aaPredicted RBP3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 CASS4Q9NQ75 786 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 XPNPEP3Q9NQH7 507 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 CHST12Q9NRB3 414 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 KCTD5Q9NXV2 234 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 TESQ9UGI8 421 aaKnown RBP3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 CORO2BQ9UQ03 480 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 SHOC2Q9UQ13 582 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 SNX13Q9Y5W8 968 aa3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 COL11A2P13942 1736 aaPredicted RBP3.98□□□□□ -1.77
RNU2-39P-201ENST00000410604 HKR1P10072 659 aa3.97□□□□□ -1.77
RNU2-39P-201ENST00000410604 KLRC1P26715 233 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms