RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 NXF1Q9UBU9 619 aaKnown RBP18.94■□□□□ 0.62
LSM5-204ENST00000409909 DENND4CQ5VZ89 1909 aa18.94■□□□□ 0.62
LSM5-204ENST00000409909 ARNTLO00327 626 aa18.93■□□□□ 0.62
LSM5-204ENST00000409909 PRAMEF12O95522 483 aa18.93■□□□□ 0.62
LSM5-204ENST00000409909 FAM163BP0C2L3 166 aa18.93■□□□□ 0.62
LSM5-204ENST00000409909 ATICP31939 592 aa18.93■□□□□ 0.62
LSM5-204ENST00000409909 AP3M2P53677 418 aa18.93■□□□□ 0.62
LSM5-204ENST00000409909 RPL10AP62906 217 aaKnown RBP18.93■□□□□ 0.62
LSM5-204ENST00000409909 TNNC1P63316 161 aa18.93■□□□□ 0.62
LSM5-204ENST00000409909 BIRC3Q13489 604 aa18.93■□□□□ 0.62
LSM5-204ENST00000409909 NFIL3Q16649 462 aa18.93■□□□□ 0.62
LSM5-204ENST00000409909 CEP135Q66GS9 1140 aa18.93■□□□□ 0.62
LSM5-204ENST00000409909 TPRG1Q6ZUI0 275 aa18.93■□□□□ 0.62
LSM5-204ENST00000409909 SMYD4Q8IYR2 804 aaPredicted RBP18.93■□□□□ 0.62
LSM5-204ENST00000409909 TMC2Q8TDI7 906 aa18.93■□□□□ 0.62
LSM5-204ENST00000409909 IRF7Q92985 503 aa18.93■□□□□ 0.62
LSM5-204ENST00000409909 MYLPFQ96A32 169 aa18.93■□□□□ 0.62
LSM5-204ENST00000409909 SYAP1Q96A49 352 aaPredicted RBP18.93■□□□□ 0.62
LSM5-204ENST00000409909 E2F7Q96AV8 911 aa18.93■□□□□ 0.62
LSM5-204ENST00000409909 SNX25Q9H3E2 840 aa18.93■□□□□ 0.62
LSM5-204ENST00000409909 MAGED2Q9UNF1 606 aaPredicted RBP18.93■□□□□ 0.62
LSM5-204ENST00000409909 COL4A2P08572 1712 aa18.93■□□□□ 0.62
LSM5-204ENST00000409909 NUP210Q8TEM1 1887 aaPredicted RBP18.92■□□□□ 0.62
LSM5-204ENST00000409909 TICRRQ7Z2Z1 1910 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 CACNA1IQ9P0X4 2223 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 GOLGA6L4A6NEF3 574 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 FAM170BA6NMN3 283 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 SLC38A8A6NNN8 435 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 ZNF263O14978 683 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 AKAP3O75969 853 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 NOL4O94818 638 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 KIF20AO95235 890 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 CSH1P0DML2 217 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 CSH2P0DML3 217 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 WEE1P30291 646 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 MAGEA11P43364 429 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 FCHO2Q0JRZ9 810 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 NCOA4Q13772 614 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 UBXN2BQ14CS0 331 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 ANGPT1Q15389 498 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 ZCWPW2Q504Y3 356 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 C4orf50Q6ZRC1 276 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 SCN4BQ8IWT1 228 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 OR6B3Q8NGW1 331 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 MYCBPAPQ8TBZ2 947 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 MYRFLQ96LU7 910 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 SMG9Q9H0W8 520 aaKnown RBP18.92■□□□□ 0.62
LSM5-204ENST00000409909 DPEP3Q9H4B8 488 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 VRTNQ9H8Y1 702 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 LTB4R2Q9NPC1 389 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 TRPV5Q9NQA5 729 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 MAGEC2Q9UBF1 373 aaPredicted RBP18.92■□□□□ 0.62
LSM5-204ENST00000409909 FRMD4BQ9Y2L6 1034 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 MIA3Q5JRA6 1907 aa18.92■□□□□ 0.62
LSM5-204ENST00000409909 OBSL1O75147 1896 aa18.91■□□□□ 0.62
LSM5-204ENST00000409909 BDNFP23560 247 aa18.91■□□□□ 0.62
LSM5-204ENST00000409909 NR2F2P24468 414 aa18.91■□□□□ 0.62
LSM5-204ENST00000409909 CDH8P55286 799 aa18.91■□□□□ 0.62
LSM5-204ENST00000409909 CYP27A1Q02318 531 aa18.91■□□□□ 0.62
LSM5-204ENST00000409909 FAM160A1Q05DH4 1040 aa18.91■□□□□ 0.62
LSM5-204ENST00000409909 ZNF699Q32M78 642 aa18.91■□□□□ 0.62
LSM5-204ENST00000409909 ZACNQ401N2 412 aa18.91■□□□□ 0.62
LSM5-204ENST00000409909 MDH1BQ5I0G3 518 aa18.91■□□□□ 0.62
LSM5-204ENST00000409909 SV2AQ7L0J3 742 aa18.91■□□□□ 0.62
LSM5-204ENST00000409909 ZNF687Q8N1G0 1237 aa18.91■□□□□ 0.62
LSM5-204ENST00000409909 TRMT2BQ96GJ1 504 aaKnown RBP18.91■□□□□ 0.62
LSM5-204ENST00000409909 PCED1BQ96HM7 432 aa18.91■□□□□ 0.62
LSM5-204ENST00000409909 GCNAQ96QF7 691 aa18.91■□□□□ 0.62
LSM5-204ENST00000409909 OSBPL6Q9BZF3 934 aa18.91■□□□□ 0.62
LSM5-204ENST00000409909 SMYD3Q9H7B4 428 aa18.91■□□□□ 0.62
LSM5-204ENST00000409909 PTPRDP23468 1912 aa18.91■□□□□ 0.62
LSM5-204ENST00000409909 FRYLO94915 3013 aa18.91■□□□□ 0.62
LSM5-204ENST00000409909 GREB1Q4ZG55 1949 aa18.9■□□□□ 0.62
LSM5-204ENST00000409909 IKBKBO14920 756 aa18.9■□□□□ 0.62
LSM5-204ENST00000409909 MAPK13O15264 365 aa18.9■□□□□ 0.62
LSM5-204ENST00000409909 CHADO15335 359 aa18.9■□□□□ 0.62
LSM5-204ENST00000409909 TADA3O75528 432 aa18.9■□□□□ 0.62
LSM5-204ENST00000409909 PTPN1P18031 435 aaKnown RBP18.9■□□□□ 0.62
LSM5-204ENST00000409909 TARSP26639 723 aaKnown RBP18.9■□□□□ 0.62
LSM5-204ENST00000409909 RAP1GAPP47736 663 aa18.9■□□□□ 0.62
LSM5-204ENST00000409909 FZD5Q13467 585 aa18.9■□□□□ 0.62
LSM5-204ENST00000409909 MAPRE1Q15691 268 aaKnown RBP18.9■□□□□ 0.62
LSM5-204ENST00000409909 TXNDC8Q6A555 127 aa18.9■□□□□ 0.62
LSM5-204ENST00000409909 ZNF852Q6ZMS4 543 aa18.9■□□□□ 0.62
LSM5-204ENST00000409909 CMTM8Q8IZV2 173 aa18.9■□□□□ 0.62
LSM5-204ENST00000409909 MAB21L3Q8N8X9 362 aa18.9■□□□□ 0.62
LSM5-204ENST00000409909 ERCC4Q92889 916 aaPredicted RBP18.9■□□□□ 0.62
LSM5-204ENST00000409909 SDCBP2Q9H190 292 aa18.9■□□□□ 0.62
LSM5-204ENST00000409909 OBP2AQ9NY56 170 aa18.9■□□□□ 0.62
LSM5-204ENST00000409909 A8MXQ7 604 aa18.89■□□□□ 0.61
LSM5-204ENST00000409909 DPYSL4O14531 572 aa18.89■□□□□ 0.61
LSM5-204ENST00000409909 VAMP7P51809 220 aa18.89■□□□□ 0.61
LSM5-204ENST00000409909 CACNA2D1P54289 1103 aa18.89■□□□□ 0.61
LSM5-204ENST00000409909 ADAM9Q13443 819 aa18.89■□□□□ 0.61
LSM5-204ENST00000409909 SGSM1Q2NKQ1 1148 aa18.89■□□□□ 0.61
LSM5-204ENST00000409909 ZNF667Q5HYK9 610 aa18.89■□□□□ 0.61
LSM5-204ENST00000409909 VSTM1Q6UX27 236 aa18.89■□□□□ 0.61
LSM5-204ENST00000409909 MON1AQ86VX9 555 aa18.89■□□□□ 0.61
LSM5-204ENST00000409909 YAF2Q8IY57 180 aa18.89■□□□□ 0.61
LSM5-204ENST00000409909 SPATA20Q8TB22 786 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 219.3 ms