RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 FEZ2Q9UHY8 353 aaPredicted RBP7.94□□□□□ -1.14
CXCR4-202ENST00000409817 A6NNZ2 444 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 LACTBL1A8MY62 500 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 FSCN2O14926 492 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 POLR3GO15318 223 aaPredicted RBP7.94□□□□□ -1.14
CXCR4-202ENST00000409817 SYF2O95926 243 aaKnown RBP7.94□□□□□ -1.14
CXCR4-202ENST00000409817 IGHA2P01877 340 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 VTNP04004 478 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 PYGMP11217 842 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 TIMP2P16035 220 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 RGS2P41220 211 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 PTGIRP43119 386 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 GSCP56915 257 aaPredicted RBP7.94□□□□□ -1.14
CXCR4-202ENST00000409817 RBP5P82980 135 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 LACTBP83111 547 aaPredicted RBP7.94□□□□□ -1.14
CXCR4-202ENST00000409817 HLTFQ14527 1009 aaKnown RBP eCLIP7.94□□□□□ -1.14
CXCR4-202ENST00000409817 TMEM132DQ14C87 1099 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 TAF1CQ15572 869 aaPredicted RBP7.94□□□□□ -1.14
CXCR4-202ENST00000409817 TUBB8Q3ZCM7 444 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 LRRC38Q5VT99 294 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 CST9Q5W186 159 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 SYDE1Q6ZW31 735 aaPredicted RBP7.94□□□□□ -1.14
CXCR4-202ENST00000409817 RASAL3Q86YV0 1011 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 CEP120Q8N960 986 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 C1orf127Q8N9H9 656 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 SNIP1Q8TAD8 396 aaKnown RBP7.94□□□□□ -1.14
CXCR4-202ENST00000409817 USP6NLQ92738 828 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 MYO19Q96H55 970 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 SH3GL2Q99962 352 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 C11orf70Q9BRQ4 267 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 ERP44Q9BS26 406 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 RBCK1Q9BYM8 510 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 MIS12Q9H081 205 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 LRRC19Q9H756 370 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 WDR35Q9P2L0 1181 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 SIX4Q9UIU6 781 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 KIAA1257Q9ULG3 409 aa7.94□□□□□ -1.14
CXCR4-202ENST00000409817 ESYT3A0FGR9 886 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 TLR3O15455 904 aaKnown RBP7.93□□□□□ -1.14
CXCR4-202ENST00000409817 TTI1O43156 1089 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 DYNC1LI2O43237 492 aaPredicted RBP7.93□□□□□ -1.14
CXCR4-202ENST00000409817 FZD6O60353 706 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 GDF9O60383 454 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 KPNA6O60684 536 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 ZIC2O95409 532 aaPredicted RBP7.93□□□□□ -1.14
CXCR4-202ENST00000409817 NFICP08651 508 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 KRT19P08727 400 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 ZNF865P0CJ78 1059 aaPredicted RBP7.93□□□□□ -1.14
CXCR4-202ENST00000409817 CD58P19256 250 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 ECHS1P30084 290 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 EIF1AXP47813 144 aaKnown RBP7.93□□□□□ -1.14
CXCR4-202ENST00000409817 MARCKSL1P49006 195 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 ZNF157P51786 506 aaPredicted RBP7.93□□□□□ -1.14
CXCR4-202ENST00000409817 OSTNP61366 133 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 DMTNQ08495 405 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 PIGHQ14442 188 aaPredicted RBP7.93□□□□□ -1.14
CXCR4-202ENST00000409817 STILQ15468 1287 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 SLC10A6Q3KNW5 377 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 WDR72Q3MJ13 1102 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 CFAP58Q5T655 872 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 DUPD1Q68J44 220 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 JADE1Q6IE81 842 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 NOTUMQ6P988 496 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 SLC27A1Q6PCB7 646 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 C17orf99Q6UX52 265 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 LRIG3Q6UXM1 1119 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 MMS22LQ6ZRQ5 1243 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 TMC7Q7Z402 723 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 TLK2Q86UE8 772 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 KATNAL2Q8IYT4 538 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 IQCKQ8N0W5 287 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 PRELID2Q8N945 189 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 C3orf20Q8ND61 904 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 CXorf38Q8TB03 319 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 MAGOHBQ96A72 148 aaKnown RBP7.93□□□□□ -1.14
CXCR4-202ENST00000409817 ELMO3Q96BJ8 720 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 APBA2Q99767 749 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 ADAMTS10Q9H324 1103 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 ST7Q9NRC1 585 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 VPS18Q9P253 973 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 CPA4Q9UI42 421 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 ADAM21Q9UKJ8 722 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 WASF2Q9Y6W5 498 aa7.93□□□□□ -1.14
CXCR4-202ENST00000409817 TMEM191CA6NGB0 347 aa7.92□□□□□ -1.14
CXCR4-202ENST00000409817 ZSCAN5CA6NGD5 496 aaPredicted RBP7.92□□□□□ -1.14
CXCR4-202ENST00000409817 AGPSO00116 658 aa7.92□□□□□ -1.14
CXCR4-202ENST00000409817 HAS3O00219 553 aa7.92□□□□□ -1.14
CXCR4-202ENST00000409817 CILPO75339 1184 aa7.92□□□□□ -1.14
CXCR4-202ENST00000409817 HMGCRP04035 888 aa7.92□□□□□ -1.14
CXCR4-202ENST00000409817 ITGB3P05106 788 aa7.92□□□□□ -1.14
CXCR4-202ENST00000409817 SMIM10L2AP0DMW4 78 aa7.92□□□□□ -1.14
CXCR4-202ENST00000409817 SMIM10L2BP0DMW5 78 aa7.92□□□□□ -1.14
CXCR4-202ENST00000409817 GNAT1P11488 350 aa7.92□□□□□ -1.14
CXCR4-202ENST00000409817 YARSP54577 528 aaKnown RBP7.92□□□□□ -1.14
CXCR4-202ENST00000409817 MRPS25P82663 173 aaKnown RBP7.92□□□□□ -1.14
CXCR4-202ENST00000409817 INCA1Q0VD86 236 aa7.92□□□□□ -1.14
CXCR4-202ENST00000409817 SREBF2Q12772 1141 aa7.92□□□□□ -1.14
CXCR4-202ENST00000409817 MYO1EQ12965 1108 aa7.92□□□□□ -1.14
CXCR4-202ENST00000409817 TEAD4Q15561 434 aa7.92□□□□□ -1.14
CXCR4-202ENST00000409817 RGMBQ6NW40 437 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms