RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 CTXN3Q4LDR2 81 aa17.57■□□□□ 0.4
TSPAN4-208ENST00000409531 PRSS55Q6UWB4 352 aaPredicted RBP17.57■□□□□ 0.4
TSPAN4-208ENST00000409531 OSTM1Q86WC4 334 aa17.57■□□□□ 0.4
TSPAN4-208ENST00000409531 SPC24Q8NBT2 197 aa17.57■□□□□ 0.4
TSPAN4-208ENST00000409531 OR8K1Q8NGG5 319 aa17.57■□□□□ 0.4
TSPAN4-208ENST00000409531 TMEM176AQ96HP8 235 aa17.57■□□□□ 0.4
TSPAN4-208ENST00000409531 GPR88Q9GZN0 384 aa17.57■□□□□ 0.4
TSPAN4-208ENST00000409531 PRKAG3Q9UGI9 489 aa17.57■□□□□ 0.4
TSPAN4-208ENST00000409531 DPP7Q9UHL4 492 aa17.57■□□□□ 0.4
TSPAN4-208ENST00000409531 KIAA1257Q9ULG3 409 aa17.57■□□□□ 0.4
TSPAN4-208ENST00000409531 USP15Q9Y4E8 981 aaPredicted RBP17.57■□□□□ 0.4
TSPAN4-208ENST00000409531 BACE2Q9Y5Z0 518 aa17.57■□□□□ 0.4
TSPAN4-208ENST00000409531 MYH10P35580 1976 aa17.57■□□□□ 0.4
TSPAN4-208ENST00000409531 GLUD1P00367 558 aa17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 PDGFRBP09619 1106 aa17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 RPL17P18621 184 aaKnown RBP17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 LMO2P25791 158 aa17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 PLA2G5P39877 138 aa17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 RAD23BP54727 409 aa17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 GSDMDP57764 484 aa17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 ITIH3Q06033 890 aa17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 ZNF394Q53GI3 561 aa17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 CES5AQ6NT32 575 aa17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 LILRA6Q6PI73 481 aa17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 PALB2Q86YC2 1186 aa17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 DCP1BQ8IZD4 617 aaKnown RBP17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 CRYBG2Q8N1P7 616 aa17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 WHAMMQ8TF30 809 aa17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 SUSD6Q92537 303 aa17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 SYT15Q9BQS2 421 aa17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 CLSTN3Q9BQT9 956 aa17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 APOL5Q9BWW9 433 aa17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 ADAM7Q9H2U9 754 aa17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 ZNHIT6Q9NWK9 470 aaKnown RBP17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 AIPL1Q9NZN9 384 aa17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 MTRRQ9UBK8 725 aa17.56■□□□□ 0.4
TSPAN4-208ENST00000409531 CYP26A1O43174 497 aa17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 GFPT2O94808 682 aa17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 PDE6CP51160 858 aa17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 ZNF132P52740 706 aa17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 SMARCB1Q12824 385 aa17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 ARID5BQ14865 1188 aa17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 ASIC2Q16515 512 aa17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 INTS6LQ5JSJ4 861 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 ELMSAN1Q6PJG2 1045 aa17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 ACOT1Q86TX2 421 aa17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 GLYCTKQ8IVS8 523 aa17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 C12orf76Q8N812 135 aaPredicted RBP17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 SLC4A11Q8NBS3 891 aa17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 B3GALNT2Q8NCR0 500 aa17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 HDAC7Q8WUI4 952 aa17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 FAM122AQ96E09 287 aa17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 HEXIM2Q96MH2 286 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 DNAJC7Q99615 494 aa17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 RTP3Q9BQQ7 232 aa17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 ELOVL4Q9GZR5 314 aa17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 PLEKHA4Q9H4M7 779 aa17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 ABHD10Q9NUJ1 306 aa17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 HMGXB4Q9UGU5 601 aa17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 BZW2Q9Y6E2 419 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-208ENST00000409531 RNF225M0QZC1 329 aaPredicted RBP17.54■□□□□ 0.4
TSPAN4-208ENST00000409531 TGM5O43548 720 aa17.54■□□□□ 0.4
TSPAN4-208ENST00000409531 PNMA6AP0CW24 399 aaPredicted RBP17.54■□□□□ 0.4
TSPAN4-208ENST00000409531 VDRP11473 427 aa17.54■□□□□ 0.4
TSPAN4-208ENST00000409531 PTPN1P18031 435 aaKnown RBP17.54■□□□□ 0.4
TSPAN4-208ENST00000409531 ACAT1P24752 427 aaKnown RBP17.54■□□□□ 0.4
TSPAN4-208ENST00000409531 GNA15P30679 374 aa17.54■□□□□ 0.4
TSPAN4-208ENST00000409531 HNRNPH3P31942 346 aaKnown RBP17.54■□□□□ 0.4
TSPAN4-208ENST00000409531 CLCN1P35523 988 aa17.54■□□□□ 0.4
TSPAN4-208ENST00000409531 ADKP55263 362 aaKnown RBP17.54■□□□□ 0.4
TSPAN4-208ENST00000409531 STILQ15468 1287 aa17.54■□□□□ 0.4
TSPAN4-208ENST00000409531 SGO2Q562F6 1265 aa17.54■□□□□ 0.4
TSPAN4-208ENST00000409531 ADHFE1Q8IWW8 467 aa17.54■□□□□ 0.4
TSPAN4-208ENST00000409531 TWNKQ96RR1 684 aa17.54■□□□□ 0.4
TSPAN4-208ENST00000409531 PTPRDP23468 1912 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 SPDYE4A6NLX3 237 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 MED7O43513 233 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 TBC1D4O60343 1298 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 SPATA31D3P0C874 917 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 CPB1P15086 417 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 CD19P15391 556 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 OR1D2P34982 312 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 ARID5AQ03989 594 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 CCDC173Q0VFZ6 552 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 RAB33AQ14088 237 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 CBX2Q14781 532 aaPredicted RBP17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 NFE2Q16621 373 aaPredicted RBP17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 ATAT1Q5SQI0 421 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 RARS2Q5T160 578 aaKnown RBP17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 SLC8B1Q6J4K2 584 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 SPATA31D4Q6ZUB0 917 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 ZNF677Q86XU0 584 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 GJD3Q8N144 294 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 TC2NQ8N9U0 490 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 OR10T2Q8NGX3 314 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 PDLIM2Q96JY6 352 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 PANX2Q96RD6 677 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 ZCWPW1Q9H0M4 648 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 DPEP3Q9H4B8 488 aa17.53■□□□□ 0.4
TSPAN4-208ENST00000409531 SFXN1Q9H9B4 322 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms