RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 SPATA2LQ8IUW3 424 aaPredicted RBP14.98□□□□□ -0.01
CHRNA1-204ENST00000409323 DCP1BQ8IZD4 617 aaKnown RBP14.98□□□□□ -0.01
CHRNA1-204ENST00000409323 FUKQ8N0W3 1084 aa14.98□□□□□ -0.01
CHRNA1-204ENST00000409323 FEZF2Q8TBJ5 459 aa14.98□□□□□ -0.01
CHRNA1-204ENST00000409323 MYCBPAPQ8TBZ2 947 aa14.98□□□□□ -0.01
CHRNA1-204ENST00000409323 SPATA18Q8TC71 538 aa14.98□□□□□ -0.01
CHRNA1-204ENST00000409323 GPR152Q8TDT2 470 aa14.98□□□□□ -0.01
CHRNA1-204ENST00000409323 EPS8L1Q8TE68 723 aa14.98□□□□□ -0.01
CHRNA1-204ENST00000409323 ZNF606Q8WXB4 792 aa14.98□□□□□ -0.01
CHRNA1-204ENST00000409323 MRPL38Q96DV4 380 aaKnown RBP14.98□□□□□ -0.01
CHRNA1-204ENST00000409323 EMILIN2Q9BXX0 1053 aa14.98□□□□□ -0.01
CHRNA1-204ENST00000409323 EDEM3Q9BZQ6 932 aa14.98□□□□□ -0.01
CHRNA1-204ENST00000409323 HAUS4Q9H6D7 363 aa14.98□□□□□ -0.01
CHRNA1-204ENST00000409323 RXFP1Q9HBX9 757 aa14.98□□□□□ -0.01
CHRNA1-204ENST00000409323 NGRNQ9NPE2 291 aaKnown RBP14.98□□□□□ -0.01
CHRNA1-204ENST00000409323 KRT82Q9NSB4 513 aa14.98□□□□□ -0.01
CHRNA1-204ENST00000409323 SEPT11Q9NVA2 429 aaKnown RBP14.98□□□□□ -0.01
CHRNA1-204ENST00000409323 TSPAN16Q9UKR8 245 aa14.98□□□□□ -0.01
CHRNA1-204ENST00000409323 TGM5O43548 720 aa14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 CLASP2O75122 1294 aaKnown RBP14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 BEST1O76090 585 aa14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 MICAL2O94851 1124 aa14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 SEC24AO95486 1093 aa14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 PAEPP09466 180 aa14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 FAM163BP0C2L3 166 aa14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 VDRP11473 427 aa14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 EPCAMP16422 314 aa14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 PDE6CP51160 858 aa14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 KLHL30Q0D2K2 578 aa14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 DUSP4Q13115 394 aa14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 TCEAL5Q5H9L2 206 aa14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 WDR59Q6PJI9 974 aa14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 FAM35AQ86V20 835 aa14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 DNAAF5Q86Y56 855 aa14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 TTC39CQ8N584 583 aa14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 OR8K1Q8NGG5 319 aa14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 CHP1Q99653 195 aa14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 SEPT5Q99719 369 aaPredicted RBP14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 TLE6Q9H808 572 aa14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 FNIP2Q9P278 1114 aa14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 STK39Q9UEW8 545 aa14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 NOCTQ9UK39 431 aaKnown RBP14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 SSX2IPQ9Y2D8 614 aa14.97□□□□□ -0.01
CHRNA1-204ENST00000409323 TRANK1O15050 2925 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 M0QYV0 167 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 TULP2O00295 520 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 O00370 1275 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 PIK3R2O00459 728 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 ADH1AP07327 375 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 FERP16591 822 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 CHRNB2P17787 502 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 GPR17Q13304 367 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 RAB33AQ14088 237 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 PTPROQ16827 1216 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 MGAT5BQ3V5L5 792 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 HS1BP3Q53T59 392 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 DENND1BQ6P3S1 775 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 TTC30AQ86WT1 665 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 CNGA4Q8IV77 575 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 SCN4BQ8IWT1 228 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 MYLIPQ8WY64 445 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 DDX1Q92499 740 aaKnown RBP14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 KCNK16Q96T55 309 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 DNAJC7Q99615 494 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 LMAN2LQ9H0V9 348 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 CYP4F11Q9HBI6 524 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 AIPL1Q9NZN9 384 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 DAAM1Q9Y4D1 1078 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 IRAK3Q9Y616 596 aa14.96□□□□□ -0.01
CHRNA1-204ENST00000409323 LINC01565O15544 149 aa14.95□□□□□ -0.02
CHRNA1-204ENST00000409323 AP1G2O75843 785 aa14.95□□□□□ -0.02
CHRNA1-204ENST00000409323 CLCN4P51793 760 aa14.95□□□□□ -0.02
CHRNA1-204ENST00000409323 MAP3K7CLP57077 242 aa14.95□□□□□ -0.02
CHRNA1-204ENST00000409323 DDR2Q16832 855 aa14.95□□□□□ -0.02
CHRNA1-204ENST00000409323 HGSNATQ68CP4 663 aa14.95□□□□□ -0.02
CHRNA1-204ENST00000409323 ZNF571Q7Z3V5 609 aaPredicted RBP14.95□□□□□ -0.02
CHRNA1-204ENST00000409323 ZNF461Q8TAF7 563 aa14.95□□□□□ -0.02
CHRNA1-204ENST00000409323 IQCDQ96DY2 449 aa14.95□□□□□ -0.02
CHRNA1-204ENST00000409323 PDCL3Q9H2J4 239 aa14.95□□□□□ -0.02
CHRNA1-204ENST00000409323 ARHGAP20Q9P2F6 1191 aa14.95□□□□□ -0.02
CHRNA1-204ENST00000409323 MYO6Q9UM54 1294 aa14.95□□□□□ -0.02
CHRNA1-204ENST00000409323 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.95□□□□□ -0.02
CHRNA1-204ENST00000409323 PCDHB5Q9Y5E4 795 aa14.95□□□□□ -0.02
CHRNA1-204ENST00000409323 REV3LO60673 3130 aa14.95□□□□□ -0.02
CHRNA1-204ENST00000409323 TMEM265A0A087WTH1 108 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 PRRG1O14668 218 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 ABLIM3O94929 683 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 GLUD1P00367 558 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 RGS7P49802 495 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 FMO1Q01740 532 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 CREMQ03060 361 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 IFRD2Q12894 506 aaPredicted RBP14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 EP400NLQ6ZTU2 488 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 DEFB123Q8N688 67 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 VN1R2Q8NFZ6 395 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 SECISBP2LQ93073 1101 aaKnown RBP14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 PCDHB18PQ96TA0 734 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 HNRNPABQ99729 332 aaKnown RBP14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 SMOQ99835 787 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms