RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 M0QYV0 167 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 PIK3R2O00459 728 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 CA12O43570 354 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 AVPP01185 164 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 PAEPP09466 180 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 GNAT1P11488 350 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 ECHS1P30084 290 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 FLT3P36888 993 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 COILP38432 576 aaPredicted RBP4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 AARSP49588 968 aaKnown RBP eCLIP4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 FLT3LGP49771 235 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 NDST1P52848 882 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 PLTPP55058 493 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 PSMC1P62191 440 aaKnown RBP4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 PURAQ00577 322 aaKnown RBP4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 MYO1EQ12965 1108 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 NNTQ13423 1086 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 IRF5Q13568 498 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 DHX34Q14147 1143 aaKnown RBP4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 SGO2Q562F6 1265 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 ODF2Q5BJF6 829 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 FAM47CQ5HY64 1035 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 CYP4F22Q6NT55 531 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 CXCL17Q6UXB2 119 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 NT5DC4Q86YG4 428 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 CD302Q8IX05 232 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 CNPY4Q8N129 248 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 C12orf29Q8N999 325 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 TRPV1Q8NER1 839 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 ZIM3Q96PE6 472 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 HERPUD2Q9BSE4 406 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 KATNAL1Q9BW62 490 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 VRTNQ9H8Y1 702 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 CYP3A43Q9HB55 503 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 FAM114A2Q9NRY5 505 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 KLHL11Q9NVR0 708 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 TUBGCP4Q9UGJ1 667 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 CYTH4Q9UIA0 394 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 BARX2Q9UMQ3 279 aaPredicted RBP4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 Q9Y3F1 56 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 TLL2Q9Y6L7 1015 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 FAM187AA6NFU0 413 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 FSCN2O14926 492 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 DUSP11O75319 330 aaKnown RBP4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 MICAL2O94851 1124 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 RALAP11233 206 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 VDRP11473 427 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 KRT3P12035 628 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 TCF4P15884 667 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 CDH5P33151 784 aaPredicted RBP4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 RFC1P35251 1148 aaPredicted RBP4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 PTGIRP43119 386 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 OGDHQ02218 1023 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 NFX1Q12986 1120 aaKnown RBP4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 TRIM32Q13049 653 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 SIX1Q15475 284 aaPredicted RBP4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 MFSD14CQ5VZR4 134 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 ALS2CLQ60I27 953 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 KAZNQ674X7 775 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 DUPD1Q68J44 220 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 TWF2Q6IBS0 349 aaKnown RBP4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 ZNF771Q7L3S4 317 aaPredicted RBP4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 BEST2Q8NFU1 509 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 ATG4AQ8WYN0 398 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 ACSF2Q96CM8 615 aaPredicted RBP4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 SNX27Q96L92 541 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 CPXM1Q96SM3 734 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 FAM118BQ9BPY3 351 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 NT5C1AQ9BXI3 368 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 LHX5Q9H2C1 402 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 ALG2Q9H553 416 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 PLEKHA5Q9HAU0 1116 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 RASAL2Q9UJF2 1139 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 PASKQ96RG2 1323 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 PSTPIP1O43586 416 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 KRT14P02533 472 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 CTSHP09668 335 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 IBSPP21815 317 aaPredicted RBP4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 CETN2P41208 172 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 TM4SF4P48230 202 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 CRYBB1P53674 252 aaPredicted RBP4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 FCGRTP55899 365 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 DHX9Q08211 1270 aaKnown RBP4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 ZNF252P-AS1Q0IIN9 211 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 PPP1R7Q15435 360 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 CNGA2Q16280 664 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 NBPF20Q3BBV1 942 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 ACOT1Q86TX2 421 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 IQCKQ8N0W5 287 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 EMC1Q8N766 993 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 C3orf20Q8ND61 904 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 OR6B3Q8NGW1 331 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 JOSD2Q8TAC2 188 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 UBLCP1Q8WVY7 318 aaPredicted RBP4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 TRIB2Q92519 343 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 ARL8AQ96BM9 186 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 FAXDC2Q96IV6 333 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 FMO2Q99518 471 aa4.2□□□□□ -1.74
LRRTM4-201ENST00000409088 MRPL45Q9BRJ2 306 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms