RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 PTGESO14684 152 aa20■□□□□ 0.79
USP39-202ENST00000409025 SPTLC1O15269 473 aa20■□□□□ 0.79
USP39-202ENST00000409025 POLR3GO15318 223 aaPredicted RBP20■□□□□ 0.79
USP39-202ENST00000409025 CABYRO75952 493 aa20■□□□□ 0.79
USP39-202ENST00000409025 RALAP11233 206 aa20■□□□□ 0.79
USP39-202ENST00000409025 LRPAP1P30533 357 aa20■□□□□ 0.79
USP39-202ENST00000409025 MAP3K21Q5TCX8 1036 aa20■□□□□ 0.79
USP39-202ENST00000409025 ALS2CLQ60I27 953 aa20■□□□□ 0.79
USP39-202ENST00000409025 TSEN2Q8NCE0 465 aaKnown RBP20■□□□□ 0.79
USP39-202ENST00000409025 APPL2Q8NEU8 664 aa20■□□□□ 0.79
USP39-202ENST00000409025 FAM71BQ8TC56 605 aa20■□□□□ 0.79
USP39-202ENST00000409025 PPP1R10Q96QC0 940 aaKnown RBP20■□□□□ 0.79
USP39-202ENST00000409025 OSBPL8Q9BZF1 889 aa20■□□□□ 0.79
USP39-202ENST00000409025 SNX25Q9H3E2 840 aa20■□□□□ 0.79
USP39-202ENST00000409025 DDX56Q9NY93 547 aaKnown RBP20■□□□□ 0.79
USP39-202ENST00000409025 NME7Q9Y5B8 376 aa20■□□□□ 0.79
USP39-202ENST00000409025 HSF2BPO75031 334 aa19.99■□□□□ 0.79
USP39-202ENST00000409025 KRT1P04264 644 aa19.99■□□□□ 0.79
USP39-202ENST00000409025 PFKMP08237 780 aa19.99■□□□□ 0.79
USP39-202ENST00000409025 SETSIPP0DME0 302 aa19.99■□□□□ 0.79
USP39-202ENST00000409025 GNL1P36915 607 aaPredicted RBP19.99■□□□□ 0.79
USP39-202ENST00000409025 DRG2P55039 364 aaKnown RBP19.99■□□□□ 0.79
USP39-202ENST00000409025 ODF2Q5BJF6 829 aa19.99■□□□□ 0.79
USP39-202ENST00000409025 ARHGAP17Q68EM7 881 aa19.99■□□□□ 0.79
USP39-202ENST00000409025 RAET1EQ8TD07 263 aa19.99■□□□□ 0.79
USP39-202ENST00000409025 C1orf54Q8WWF1 131 aa19.99■□□□□ 0.79
USP39-202ENST00000409025 RNF25Q96BH1 459 aaPredicted RBP19.99■□□□□ 0.79
USP39-202ENST00000409025 ZBTB9Q96C00 473 aa19.99■□□□□ 0.79
USP39-202ENST00000409025 HOMER3Q9NSC5 361 aa19.99■□□□□ 0.79
USP39-202ENST00000409025 FAM49BQ9NUQ9 324 aa19.99■□□□□ 0.79
USP39-202ENST00000409025 SLC38A7Q9NVC3 462 aa19.99■□□□□ 0.79
USP39-202ENST00000409025 THSD7BQ9C0I4 1608 aa19.99■□□□□ 0.79
USP39-202ENST00000409025 HUS1O60921 280 aa19.98■□□□□ 0.79
USP39-202ENST00000409025 TCF4P15884 667 aa19.98■□□□□ 0.79
USP39-202ENST00000409025 ITGA7Q13683 1181 aa19.98■□□□□ 0.79
USP39-202ENST00000409025 FAM102AQ5T9C2 384 aaPredicted RBP19.98■□□□□ 0.79
USP39-202ENST00000409025 KBTBD7Q8WVZ9 684 aa19.98■□□□□ 0.79
USP39-202ENST00000409025 ZFP42Q96MM3 310 aa19.98■□□□□ 0.79
USP39-202ENST00000409025 HEMGNQ9BXL5 484 aa19.98■□□□□ 0.79
USP39-202ENST00000409025 NEUROG2Q9H2A3 272 aa19.98■□□□□ 0.79
USP39-202ENST00000409025 NOD1Q9Y239 953 aa19.98■□□□□ 0.79
USP39-202ENST00000409025 GBP1P32455 592 aa19.98■□□□□ 0.79
USP39-202ENST00000409025 GGCXP38435 758 aa19.98■□□□□ 0.79
USP39-202ENST00000409025 SNX16P57768 344 aa19.98■□□□□ 0.79
USP39-202ENST00000409025 LILRA4P59901 499 aa19.98■□□□□ 0.79
USP39-202ENST00000409025 FAM193AP78312 1265 aa19.98■□□□□ 0.79
USP39-202ENST00000409025 GABPB1Q06547 395 aaPredicted RBP19.98■□□□□ 0.79
USP39-202ENST00000409025 PTK7Q13308 1070 aa19.98■□□□□ 0.79
USP39-202ENST00000409025 KLF1Q13351 362 aaPredicted RBP19.98■□□□□ 0.79
USP39-202ENST00000409025 HADHQ16836 314 aaKnown RBP19.98■□□□□ 0.79
USP39-202ENST00000409025 ATP13A4Q4VNC1 1196 aa19.98■□□□□ 0.79
USP39-202ENST00000409025 PKDCCQ504Y2 493 aa19.98■□□□□ 0.79
USP39-202ENST00000409025 OR6B2Q6IFH4 312 aa19.98■□□□□ 0.79
USP39-202ENST00000409025 LIMS2Q7Z4I7 341 aa19.98■□□□□ 0.79
USP39-202ENST00000409025 CRYBG2Q8N1P7 616 aa19.98■□□□□ 0.79
USP39-202ENST00000409025 LRRC45Q96CN5 670 aa19.98■□□□□ 0.79
USP39-202ENST00000409025 HERPUD2Q9BSE4 406 aa19.98■□□□□ 0.79
USP39-202ENST00000409025 AGO3Q9H9G7 860 aaKnown RBP19.98■□□□□ 0.79
USP39-202ENST00000409025 E5RJQ4 531 aa19.97■□□□□ 0.79
USP39-202ENST00000409025 ECEL1O95672 775 aa19.97■□□□□ 0.79
USP39-202ENST00000409025 PDGFRBP09619 1106 aa19.97■□□□□ 0.79
USP39-202ENST00000409025 HSPA9P38646 679 aaKnown RBP19.97■□□□□ 0.79
USP39-202ENST00000409025 KCNJ1P48048 391 aa19.97■□□□□ 0.79
USP39-202ENST00000409025 COPS2P61201 443 aa19.97■□□□□ 0.79
USP39-202ENST00000409025 ACAP1Q15027 740 aa19.97■□□□□ 0.79
USP39-202ENST00000409025 KCTD19Q17RG1 926 aaPredicted RBP19.97■□□□□ 0.79
USP39-202ENST00000409025 POLNQ7Z5Q5 900 aa19.97■□□□□ 0.79
USP39-202ENST00000409025 TTC30AQ86WT1 665 aa19.97■□□□□ 0.79
USP39-202ENST00000409025 TOP6BLQ8N6T0 577 aa19.97■□□□□ 0.79
USP39-202ENST00000409025 EMC1Q8N766 993 aa19.97■□□□□ 0.79
USP39-202ENST00000409025 PXYLP1Q8TE99 480 aa19.97■□□□□ 0.79
USP39-202ENST00000409025 SLCO2A1Q92959 643 aa19.97■□□□□ 0.79
USP39-202ENST00000409025 SLITRK1Q96PX8 696 aa19.97■□□□□ 0.79
USP39-202ENST00000409025 RUFY1Q96T51 708 aa19.97■□□□□ 0.79
USP39-202ENST00000409025 DCLK3Q9C098 648 aa19.97■□□□□ 0.79
USP39-202ENST00000409025 DPEP3Q9H4B8 488 aa19.97■□□□□ 0.79
USP39-202ENST00000409025 KLHL11Q9NVR0 708 aa19.97■□□□□ 0.79
USP39-202ENST00000409025 GIT1Q9Y2X7 761 aa19.97■□□□□ 0.79
USP39-202ENST00000409025 SYF2O95926 243 aaKnown RBP19.96■□□□□ 0.79
USP39-202ENST00000409025 GNRH1P01148 92 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 FGFR1P11362 822 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 MLH1P40692 756 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 ACLYP53396 1101 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 SNX1Q13596 522 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 CFAP58Q5T655 872 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 ADGRF2Q8IZF7 708 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 GRK7Q8WTQ7 553 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 GAD1Q99259 594 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 CHST7Q9NS84 486 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 FEZ2Q9UHY8 353 aaPredicted RBP19.96■□□□□ 0.79
USP39-202ENST00000409025 PADI3Q9ULW8 664 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 PTPN22Q9Y2R2 807 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 SNX24Q9Y343 169 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.96■□□□□ 0.79
USP39-202ENST00000409025 MEIS3P2A8K0S8 358 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 PI4K2BG5E9Z4 385 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 AGPSO00116 658 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 THP07101 528 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 KRT7P08729 469 aa19.96■□□□□ 0.79
USP39-202ENST00000409025 CD52P31358 61 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms