RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 SPECC1L-ADORA2AF8WAN1 911 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 PDXKO00764 312 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 STX10O60499 249 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 LRP3O75074 770 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 RTN3O95197 1032 aaPredicted RBP13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 PAPSS2O95340 614 aaPredicted RBP13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 ATF6P18850 670 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 DRD1P21728 446 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 CCNE1P24864 410 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 CTHP32929 405 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 GNL1P36915 607 aaPredicted RBP13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 GRIK1P39086 918 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 VIPR2P41587 438 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 IFNAR2P48551 515 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 CYP2J2P51589 502 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 ARHGAP8P85298 464 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 LMNB2Q03252 620 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 CYP24A1Q07973 514 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 KCNA1Q09470 495 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 ZNF667Q5HYK9 610 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 DENND5BQ6ZUT9 1274 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 GAREM2Q75VX8 874 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 SLC9A9Q8IVB4 645 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 SCN4BQ8IWT1 228 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 ZBTB44Q8NCP5 570 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 ACDQ96AP0 544 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 RMND1Q9NWS8 449 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 PCDHA7Q9UN72 937 aa13.74□□□□□ -0.21
SNORD88B-201ENST00000408454 CCDC163A0A0D9SF12 145 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 IKBKBO14920 756 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 MAPK13O15264 365 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 MOSPD3O75425 235 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 NFATC1O95644 943 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 KRT13P13646 458 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 GJA1P17302 382 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 HOXA6P31267 233 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 SYKP43405 635 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 ID4P47928 161 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 CYP27A1Q02318 531 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 GOLGA8FQ08AF8 430 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 GOLGA8DPQ0D2H9 430 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 E2F5Q15329 346 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 WDR72Q3MJ13 1102 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 TDRD10Q5VZ19 366 aaKnown RBP13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 C11orf74Q86VG3 221 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 CBWD2Q8IUF1 395 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 MAB21L3Q8N8X9 362 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 OR6B3Q8NGW1 331 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 MYCBPAPQ8TBZ2 947 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 GIPC2Q8TF65 315 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 OVCA2Q8WZ82 227 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 CCDC127Q96BQ5 260 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 ZSWIM3Q96MP5 696 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 PHOX2BQ99453 314 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 LPIN3Q9BQK8 851 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 PLA2G2FQ9BZM2 168 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 EPC1Q9H2F5 836 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 FAM124BQ9H5Z6 455 aaPredicted RBP13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 VRTNQ9H8Y1 702 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 COMMD8Q9NX08 183 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 GTF3C4Q9UKN8 822 aa13.73□□□□□ -0.21
SNORD88B-201ENST00000408454 CACNA1HO95180 2353 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 A0A087X0B3 334 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 SLC38A8A6NNN8 435 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 A8MXQ7 604 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 VNN2O95498 520 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 TCF3P15923 654 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 CD72P21854 359 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 AFMP43652 599 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 NOP14P78316 857 aaKnown RBP13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 RUNX3Q13761 415 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 SOWAHAQ2M3V2 549 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 SGSM1Q2NKQ1 1148 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 ZNF699Q32M78 642 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 LAIR1Q6GTX8 287 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 FAM171BQ6P995 826 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 INTS8Q75QN2 995 aaKnown RBP13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 NELFCDQ8IXH7 590 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 RDH13Q8NBN7 331 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 SCFD1Q8WVM8 642 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 FAXDC2Q96IV6 333 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 C8orf48Q96LL4 319 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 TMEM209Q96SK2 561 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 CRISPLD1Q9H336 500 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 R4GN57 208 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 TCHHQ07283 1943 aa13.72□□□□□ -0.21
SNORD88B-201ENST00000408454 F11P03951 625 aa13.71□□□□□ -0.21
SNORD88B-201ENST00000408454 PPP1R2P41236 205 aa13.71□□□□□ -0.21
SNORD88B-201ENST00000408454 SLC8A3P57103 927 aa13.71□□□□□ -0.21
SNORD88B-201ENST00000408454 CYP4F8P98187 520 aa13.71□□□□□ -0.21
SNORD88B-201ENST00000408454 DNM1Q05193 864 aaKnown RBP13.71□□□□□ -0.21
SNORD88B-201ENST00000408454 EHHADHQ08426 723 aa13.71□□□□□ -0.21
SNORD88B-201ENST00000408454 MTAPQ13126 283 aa13.71□□□□□ -0.21
SNORD88B-201ENST00000408454 PUM1Q14671 1186 aaKnown RBP eCLIP13.71□□□□□ -0.21
SNORD88B-201ENST00000408454 MTF1Q14872 753 aa13.71□□□□□ -0.21
SNORD88B-201ENST00000408454 FOXD4L5Q5VV16 416 aaPredicted RBP13.71□□□□□ -0.21
SNORD88B-201ENST00000408454 TADA2BQ86TJ2 420 aa13.71□□□□□ -0.21
SNORD88B-201ENST00000408454 LONP2Q86WA8 852 aa13.71□□□□□ -0.21
SNORD88B-201ENST00000408454 CAMKK1Q8N5S9 505 aa13.71□□□□□ -0.21
SNORD88B-201ENST00000408454 TMC2Q8TDI7 906 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms