RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 SERPINC1P01008 464 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 CYP11A1P05108 521 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 TPM3P06753 285 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 ADH1AP07327 375 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 GLULP15104 373 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 ZNF18P17022 549 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 PCSK1P29120 753 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 COPB1P53618 953 aaKnown RBP11.27□□□□□ -0.61
RPAIN-204ENST00000405578 YWHAEP62258 255 aaKnown RBP11.27□□□□□ -0.61
RPAIN-204ENST00000405578 ARHGAP8P85298 464 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 COL9A2Q14055 689 aaPredicted RBP11.27□□□□□ -0.61
RPAIN-204ENST00000405578 PTPN14Q15678 1187 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 PSMD5Q16401 504 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 CTXN3Q4LDR2 81 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 RTP2Q5QGT7 225 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 CD300LGQ6UXG3 332 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 TAS1R1Q7RTX1 841 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 RNF168Q8IYW5 571 aaPredicted RBP11.27□□□□□ -0.61
RPAIN-204ENST00000405578 ADGRF2Q8IZF7 708 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 SLC44A3Q8N4M1 653 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 GPR161Q8N6U8 529 aaKnown RBP11.27□□□□□ -0.61
RPAIN-204ENST00000405578 EHBP1Q8NDI1 1231 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 PJA1Q8NG27 643 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 NT5C1BQ96P26 610 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 RTKNQ9BST9 563 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 VN1R3Q9BXE9 311 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 NIF3L1Q9GZT8 377 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 XYLT2Q9H1B5 865 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 VPS16Q9H269 839 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 FAM124BQ9H5Z6 455 aaPredicted RBP11.27□□□□□ -0.61
RPAIN-204ENST00000405578 CYP3A43Q9HB55 503 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 TAB2Q9NYJ8 693 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 GCNT4Q9P109 453 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 DPP7Q9UHL4 492 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 BACE2Q9Y5Z0 518 aa11.27□□□□□ -0.61
RPAIN-204ENST00000405578 OR6C75A6NL08 312 aa11.26□□□□□ -0.61
RPAIN-204ENST00000405578 TACC1O75410 805 aa11.26□□□□□ -0.61
RPAIN-204ENST00000405578 OAZ2O95190 189 aa11.26□□□□□ -0.61
RPAIN-204ENST00000405578 EFEMP2O95967 443 aa11.26□□□□□ -0.61
RPAIN-204ENST00000405578 TBXAS1P24557 533 aaPredicted RBP11.26□□□□□ -0.61
RPAIN-204ENST00000405578 KLRC2P26717 231 aa11.26□□□□□ -0.61
RPAIN-204ENST00000405578 CLCN4P51793 760 aa11.26□□□□□ -0.61
RPAIN-204ENST00000405578 TSPY1Q01534 308 aa11.26□□□□□ -0.61
RPAIN-204ENST00000405578 WSCD1Q658N2 575 aa11.26□□□□□ -0.61
RPAIN-204ENST00000405578 TMEM130Q8N3G9 435 aa11.26□□□□□ -0.61
RPAIN-204ENST00000405578 PDCL2Q8N4E4 241 aa11.26□□□□□ -0.61
RPAIN-204ENST00000405578 RNF214Q8ND24 703 aa11.26□□□□□ -0.61
RPAIN-204ENST00000405578 LNX1Q8TBB1 728 aaPredicted RBP11.26□□□□□ -0.61
RPAIN-204ENST00000405578 SECISBP2LQ93073 1101 aaKnown RBP11.26□□□□□ -0.61
RPAIN-204ENST00000405578 B3GALT6Q96L58 329 aa11.26□□□□□ -0.61
RPAIN-204ENST00000405578 PCMTD1Q96MG8 357 aaPredicted RBP11.26□□□□□ -0.61
RPAIN-204ENST00000405578 MYADMQ96S97 322 aa11.26□□□□□ -0.61
RPAIN-204ENST00000405578 PI4K2AQ9BTU6 479 aa11.26□□□□□ -0.61
RPAIN-204ENST00000405578 RXFP1Q9HBX9 757 aa11.26□□□□□ -0.61
RPAIN-204ENST00000405578 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.26□□□□□ -0.615e-6■■■■□ 23.1
RPAIN-204ENST00000405578 SPATA6Q9NWH7 488 aaPredicted RBP11.26□□□□□ -0.61
RPAIN-204ENST00000405578 FNIP2Q9P278 1114 aa11.26□□□□□ -0.61
RPAIN-204ENST00000405578 MTRRQ9UBK8 725 aa11.26□□□□□ -0.61
RPAIN-204ENST00000405578 SMG5Q9UPR3 1016 aaKnown RBP11.26□□□□□ -0.61
RPAIN-204ENST00000405578 TIMM13Q9Y5L4 95 aaPredicted RBP11.26□□□□□ -0.61
RPAIN-204ENST00000405578 CLUHO75153 1309 aa11.26□□□□□ -0.61
RPAIN-204ENST00000405578 LGALS16A8MUM7 142 aa11.25□□□□□ -0.61
RPAIN-204ENST00000405578 ATP1A3P13637 1013 aa11.25□□□□□ -0.61
RPAIN-204ENST00000405578 WARSP23381 471 aaKnown RBP11.25□□□□□ -0.61
RPAIN-204ENST00000405578 IGFBP6P24592 240 aaPredicted RBP11.25□□□□□ -0.61
RPAIN-204ENST00000405578 GNL1P36915 607 aaPredicted RBP11.25□□□□□ -0.61
RPAIN-204ENST00000405578 UBXN1Q04323 297 aa11.25□□□□□ -0.61
RPAIN-204ENST00000405578 SMARCB1Q12824 385 aa11.25□□□□□ -0.61
RPAIN-204ENST00000405578 LRMPQ12912 555 aa11.25□□□□□ -0.61
RPAIN-204ENST00000405578 SOWAHAQ2M3V2 549 aa11.25□□□□□ -0.61
RPAIN-204ENST00000405578 MIIPQ5JXC2 388 aa11.25□□□□□ -0.61
RPAIN-204ENST00000405578 PRSS55Q6UWB4 352 aaPredicted RBP11.25□□□□□ -0.61
RPAIN-204ENST00000405578 SCARA5Q6ZMJ2 495 aa11.25□□□□□ -0.61
RPAIN-204ENST00000405578 ENOSF1Q7L5Y1 443 aa11.25□□□□□ -0.61
RPAIN-204ENST00000405578 DCP1BQ8IZD4 617 aaKnown RBP11.25□□□□□ -0.61
RPAIN-204ENST00000405578 PPM1KQ8N3J5 372 aa11.25□□□□□ -0.61
RPAIN-204ENST00000405578 OR6B3Q8NGW1 331 aa11.25□□□□□ -0.61
RPAIN-204ENST00000405578 SEMA4DQ92854 862 aa11.25□□□□□ -0.61
RPAIN-204ENST00000405578 TNIP3Q96KP6 325 aa11.25□□□□□ -0.61
RPAIN-204ENST00000405578 KLHL5Q96PQ7 755 aa11.25□□□□□ -0.61
RPAIN-204ENST00000405578 CRACR2AQ9BSW2 395 aa11.25□□□□□ -0.61
RPAIN-204ENST00000405578 INTS2Q9H0H0 1204 aaKnown RBP11.25□□□□□ -0.61
RPAIN-204ENST00000405578 WDR6Q9NNW5 1121 aaKnown RBP11.25□□□□□ -0.61
RPAIN-204ENST00000405578 MAN1C1Q9NR34 630 aa11.25□□□□□ -0.61
RPAIN-204ENST00000405578 DDX43Q9NXZ2 648 aaKnown RBP11.25□□□□□ -0.61
RPAIN-204ENST00000405578 EPS15L1Q9UBC2 864 aa11.25□□□□□ -0.61
RPAIN-204ENST00000405578 L1RE1Q9UN81 338 aa11.25□□□□□ -0.61
RPAIN-204ENST00000405578 CDY1Q9Y6F8 540 aa11.25□□□□□ -0.61
RPAIN-204ENST00000405578 CNOT1A5YKK6 2376 aaKnown RBP11.25□□□□□ -0.61
RPAIN-204ENST00000405578 A8MXQ7 604 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 TEX28O15482 410 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 CBFA2T2O43439 604 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 LAMTOR5O43504 91 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 LILRB3O75022 631 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 GLUD1P00367 558 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 C1RP00736 705 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 CNPP09543 421 aaKnown RBP11.24□□□□□ -0.61
RPAIN-204ENST00000405578 ATXN8OSP0DMR3 200 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 CPB1P15086 417 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 ELF1P32519 619 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms