RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 PALB2Q86YC2 1186 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 ZNF461Q8TAF7 563 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 SPPL2BQ8TCT7 592 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 SLC2A14Q8TDB8 520 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 EPS8L1Q8TE68 723 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 PANX2Q96RD6 677 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 HNRNPABQ99729 332 aaKnown RBP16.7■□□□□ 0.26
CDPF1-204ENST00000404744 B3GNT5Q9BYG0 378 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 PRDM12Q9H4Q4 367 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 HAUS4Q9H6D7 363 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 SEPT11Q9NVA2 429 aaKnown RBP16.7■□□□□ 0.26
CDPF1-204ENST00000404744 TMLHEQ9NVH6 421 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 CEP83Q9Y592 693 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 PCDHGC5Q9Y5F6 944 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 WDR27A2RRH5 827 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 SOX1O00570 391 aaPredicted RBP16.7■□□□□ 0.26
CDPF1-204ENST00000404744 NRDCO43847 1150 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 TNFAIP3P21580 790 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 CDR1P51861 262 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 CDR2Q01850 454 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 RNF19BQ6ZMZ0 732 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 NOP9Q86U38 636 aaKnown RBP16.7■□□□□ 0.26
CDPF1-204ENST00000404744 TFAP2BQ92481 460 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 FUBP3Q96I24 572 aaKnown RBP eCLIP16.7■□□□□ 0.26
CDPF1-204ENST00000404744 LRCH3Q96II8 777 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 PDLIM2Q96JY6 352 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 PKMYT1Q99640 499 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 AGPAT1Q99943 283 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.7■□□□□ 0.26
CDPF1-204ENST00000404744 DEF6Q9H4E7 631 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 AFF4Q9UHB7 1163 aaKnown RBP16.7■□□□□ 0.26
CDPF1-204ENST00000404744 TSPAN16Q9UKR8 245 aa16.7■□□□□ 0.26
CDPF1-204ENST00000404744 MTMR11A4FU01 709 aa16.69■□□□□ 0.26
CDPF1-204ENST00000404744 O00370 1275 aa16.69■□□□□ 0.26
CDPF1-204ENST00000404744 CLDN5O00501 218 aa16.69■□□□□ 0.26
CDPF1-204ENST00000404744 BDNFP23560 247 aa16.69■□□□□ 0.26
CDPF1-204ENST00000404744 SSTR3P32745 418 aaPredicted RBP16.69■□□□□ 0.26
CDPF1-204ENST00000404744 ADCY1Q08828 1119 aa16.69■□□□□ 0.26
CDPF1-204ENST00000404744 CCDC142Q17RM4 750 aa16.69■□□□□ 0.26
CDPF1-204ENST00000404744 GOLGA7BQ2TAP0 167 aa16.69■□□□□ 0.26
CDPF1-204ENST00000404744 E4F1Q66K89 784 aaPredicted RBP16.69■□□□□ 0.26
CDPF1-204ENST00000404744 LCLAT1Q6UWP7 414 aa16.69■□□□□ 0.26
CDPF1-204ENST00000404744 RBM23Q86U06 439 aaKnown RBP16.69■□□□□ 0.26
CDPF1-204ENST00000404744 FUKQ8N0W3 1084 aa16.69■□□□□ 0.26
CDPF1-204ENST00000404744 SLC20A1Q8WUM9 679 aa16.69■□□□□ 0.26
CDPF1-204ENST00000404744 SMARCD1Q96GM5 515 aa16.69■□□□□ 0.26
CDPF1-204ENST00000404744 TTYH1Q9H313 450 aaPredicted RBP16.69■□□□□ 0.26
CDPF1-204ENST00000404744 TLE6Q9H808 572 aa16.69■□□□□ 0.26
CDPF1-204ENST00000404744 NOCTQ9UK39 431 aaKnown RBP16.69■□□□□ 0.26
CDPF1-204ENST00000404744 MAFFQ9ULX9 164 aa16.69■□□□□ 0.26
CDPF1-204ENST00000404744 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.69■□□□□ 0.26
CDPF1-204ENST00000404744 LAMA3Q16787 3333 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 M0QYV0 167 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 AP1G2O75843 785 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 MICAL2O94851 1124 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 ABLIM3O94929 683 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 GLUD1P00367 558 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 MMEP08473 750 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 FAM200BP0CF97 657 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 ATF2P15336 505 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 GRIK1P39086 918 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 TUFMP49411 452 aaKnown RBP16.68■□□□□ 0.26
CDPF1-204ENST00000404744 GRIN2CQ14957 1233 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 MEA1Q16626 185 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 MGAT5BQ3V5L5 792 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 CFAP221Q4G0U5 840 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 CYP26C1Q6V0L0 522 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 FAM35AQ86V20 835 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 ANKRD52Q8NB46 1076 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 ATAD1Q8NBU5 361 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 CCDC42Q96M95 316 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 ZNF518BQ9C0D4 1074 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 CYP4F11Q9HBI6 524 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 ABCB6Q9NP58 842 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 LMCD1Q9NZU5 365 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 PCDHGC3Q9UN70 934 aa16.68■□□□□ 0.26
CDPF1-204ENST00000404744 PRRG1O14668 218 aa16.67■□□□□ 0.26
CDPF1-204ENST00000404744 PER2O15055 1255 aa16.67■□□□□ 0.26
CDPF1-204ENST00000404744 TGM5O43548 720 aa16.67■□□□□ 0.26
CDPF1-204ENST00000404744 CYP2F1P24903 491 aa16.67■□□□□ 0.26
CDPF1-204ENST00000404744 ANXA13P27216 316 aa16.67■□□□□ 0.26
CDPF1-204ENST00000404744 BCAT1P54687 386 aa16.67■□□□□ 0.26
CDPF1-204ENST00000404744 CDK17Q00537 523 aa16.67■□□□□ 0.26
CDPF1-204ENST00000404744 DUSP4Q13115 394 aa16.67■□□□□ 0.26
CDPF1-204ENST00000404744 HGSNATQ68CP4 663 aa16.67■□□□□ 0.26
CDPF1-204ENST00000404744 ELMSAN1Q6PJG2 1045 aa16.67■□□□□ 0.26
CDPF1-204ENST00000404744 WDR59Q6PJI9 974 aa16.67■□□□□ 0.26
CDPF1-204ENST00000404744 TRIM72Q6ZMU5 477 aa16.67■□□□□ 0.26
CDPF1-204ENST00000404744 ZNF571Q7Z3V5 609 aaPredicted RBP16.67■□□□□ 0.26
CDPF1-204ENST00000404744 TMTC1Q8IUR5 882 aa16.67■□□□□ 0.26
CDPF1-204ENST00000404744 SCN4BQ8IWT1 228 aa16.67■□□□□ 0.26
CDPF1-204ENST00000404744 TMEM35BQ8NCS4 154 aa16.67■□□□□ 0.26
CDPF1-204ENST00000404744 UBA3Q8TBC4 463 aa16.67■□□□□ 0.26
CDPF1-204ENST00000404744 DDX1Q92499 740 aaKnown RBP16.67■□□□□ 0.26
CDPF1-204ENST00000404744 FAM161BQ96MY7 647 aa16.67■□□□□ 0.26
CDPF1-204ENST00000404744 GAS2L1Q99501 681 aaPredicted RBP16.67■□□□□ 0.26
CDPF1-204ENST00000404744 SEPT5Q99719 369 aaPredicted RBP16.67■□□□□ 0.26
CDPF1-204ENST00000404744 BAG1Q99933 345 aaPredicted RBP16.67■□□□□ 0.26
CDPF1-204ENST00000404744 DUSP16Q9BY84 665 aa16.67■□□□□ 0.26
CDPF1-204ENST00000404744 NSUN3Q9H649 340 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms