RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 KLK7P49862 253 aa18.29■□□□□ 0.52
PTCHD3P3-201ENST00000403073 RAD23BP54727 409 aa18.29■□□□□ 0.52
PTCHD3P3-201ENST00000403073 YWHAEP62258 255 aaKnown RBP18.29■□□□□ 0.52
PTCHD3P3-201ENST00000403073 TPM4P67936 248 aa18.29■□□□□ 0.52
PTCHD3P3-201ENST00000403073 DDR2Q16832 855 aa18.29■□□□□ 0.52
PTCHD3P3-201ENST00000403073 CFAP221Q4G0U5 840 aa18.29■□□□□ 0.52
PTCHD3P3-201ENST00000403073 FKBP15Q5T1M5 1219 aa18.29■□□□□ 0.52
PTCHD3P3-201ENST00000403073 SDHAF4Q5VUM1 108 aa18.29■□□□□ 0.52
PTCHD3P3-201ENST00000403073 GRASPQ7Z6J2 395 aaPredicted RBP18.29■□□□□ 0.52
PTCHD3P3-201ENST00000403073 SLC4A11Q8NBS3 891 aa18.29■□□□□ 0.52
PTCHD3P3-201ENST00000403073 GPR152Q8TDT2 470 aa18.29■□□□□ 0.52
PTCHD3P3-201ENST00000403073 GIPC2Q8TF65 315 aa18.29■□□□□ 0.52
PTCHD3P3-201ENST00000403073 TMEM176AQ96HP8 235 aa18.29■□□□□ 0.52
PTCHD3P3-201ENST00000403073 HEXIM2Q96MH2 286 aaKnown RBP18.29■□□□□ 0.52
PTCHD3P3-201ENST00000403073 MED10Q9BTT4 135 aa18.29■□□□□ 0.52
PTCHD3P3-201ENST00000403073 ZNF518BQ9C0D4 1074 aa18.29■□□□□ 0.52
PTCHD3P3-201ENST00000403073 ABCB6Q9NP58 842 aa18.29■□□□□ 0.52
PTCHD3P3-201ENST00000403073 FAM49BQ9NUQ9 324 aa18.29■□□□□ 0.52
PTCHD3P3-201ENST00000403073 HCFC1R1Q9NWW0 138 aa18.29■□□□□ 0.52
PTCHD3P3-201ENST00000403073 CEP72Q9P209 647 aa18.29■□□□□ 0.52
PTCHD3P3-201ENST00000403073 APEX2Q9UBZ4 518 aa18.29■□□□□ 0.52
PTCHD3P3-201ENST00000403073 PCDHB4Q9Y5E5 795 aa18.29■□□□□ 0.52
PTCHD3P3-201ENST00000403073 GOLGA6L19H0YKK7 550 aa18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 RNF225M0QZC1 329 aaPredicted RBP18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 XYLBO75191 536 aa18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 BMP1P13497 986 aa18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 CCDC130P13994 396 aa18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 ATF6P18850 670 aa18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 MTHFRP42898 656 aa18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 MFAP3P55082 362 aa18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 NTHL1P78549 312 aa18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 UBXN1Q04323 297 aa18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 CBX2Q14781 532 aaPredicted RBP18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 SMAD2Q15796 467 aaKnown RBP18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 TMEM270Q6UE05 265 aa18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 CYP26C1Q6V0L0 522 aa18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 PAQR9Q6ZVX9 377 aa18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 SCN4BQ8IWT1 228 aa18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 RNF214Q8ND24 703 aa18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 FUBP3Q96I24 572 aaKnown RBP eCLIP18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 ZNF512Q96ME7 567 aaPredicted RBP18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 RIPOR3Q96MK2 946 aa18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 LSM14BQ9BX40 385 aaKnown RBP18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 FAM124BQ9H5Z6 455 aaPredicted RBP18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 DNMT3BQ9UBC3 853 aaKnown RBP18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 DNAJC12Q9UKB3 198 aa18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 AJAP1Q9UKB5 411 aaPredicted RBP18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 COL6A3P12111 3177 aa18.28■□□□□ 0.52
PTCHD3P3-201ENST00000403073 CACNA2D1P54289 1103 aa18.27■□□□□ 0.52
PTCHD3P3-201ENST00000403073 EPHB3P54753 998 aa18.27■□□□□ 0.52
PTCHD3P3-201ENST00000403073 PLD1Q13393 1074 aa18.27■□□□□ 0.52
PTCHD3P3-201ENST00000403073 ARHGAP44Q17R89 818 aa18.27■□□□□ 0.52
PTCHD3P3-201ENST00000403073 KLHDC7AQ5VTJ3 777 aa18.27■□□□□ 0.52
PTCHD3P3-201ENST00000403073 HS6ST3Q8IZP7 471 aa18.27■□□□□ 0.52
PTCHD3P3-201ENST00000403073 FUKQ8N0W3 1084 aa18.27■□□□□ 0.52
PTCHD3P3-201ENST00000403073 SLC2A14Q8TDB8 520 aa18.27■□□□□ 0.52
PTCHD3P3-201ENST00000403073 CYFIP2Q96F07 1278 aa18.27■□□□□ 0.52
PTCHD3P3-201ENST00000403073 NAP1L5Q96NT1 182 aaPredicted RBP18.27■□□□□ 0.52
PTCHD3P3-201ENST00000403073 CORO1BQ9BR76 489 aa18.27■□□□□ 0.52
PTCHD3P3-201ENST00000403073 POMKQ9H5K3 350 aa18.27■□□□□ 0.52
PTCHD3P3-201ENST00000403073 RTN4Q9NQC3 1192 aaKnown RBP18.27■□□□□ 0.52
PTCHD3P3-201ENST00000403073 TEX33O43247 280 aa18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 SERPINC1P01008 464 aa18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 CALCAP01258 141 aa18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 POU2F2P09086 479 aa18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 KRT5P13647 590 aa18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 PTPN2P17706 415 aa18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 TRIM21P19474 475 aaKnown RBP18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 ADORA2BP29275 332 aa18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 GRIK1P39086 918 aa18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 MAGEA11P43364 429 aa18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 RPL10AP62906 217 aaKnown RBP18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 SYCP1Q15431 976 aa18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 PTPN21Q16825 1174 aa18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 IQCEQ6IPM2 695 aa18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 ENOSF1Q7L5Y1 443 aa18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 DNAJB7Q7Z6W7 309 aaPredicted RBP18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 FAM35AQ86V20 835 aa18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 ELMOD1Q8N336 334 aa18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 RBBP8NLQ8NC74 664 aaPredicted RBP18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 STKLD1Q8NE28 680 aa18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 NECTIN4Q96NY8 510 aa18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 HNRNPABQ99729 332 aaKnown RBP18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 DNAI2Q9GZS0 605 aa18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 WDR6Q9NNW5 1121 aaKnown RBP18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 TMEM30AQ9NV96 361 aa18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 FAM50BQ9Y247 325 aa18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 SIK3Q9Y2K2 1263 aa18.26■□□□□ 0.51
PTCHD3P3-201ENST00000403073 XIRP2A4UGR9 3374 aa18.25■□□□□ 0.51
PTCHD3P3-201ENST00000403073 CD19P15391 556 aa18.25■□□□□ 0.51
PTCHD3P3-201ENST00000403073 FANCCQ00597 558 aa18.25■□□□□ 0.51
PTCHD3P3-201ENST00000403073 MTMR3Q13615 1198 aa18.25■□□□□ 0.51
PTCHD3P3-201ENST00000403073 FILIP1LQ4L180 1135 aa18.25■□□□□ 0.51
PTCHD3P3-201ENST00000403073 PPP1R26Q5T8A7 1209 aaPredicted RBP18.25■□□□□ 0.51
PTCHD3P3-201ENST00000403073 VSTM1Q6UX27 236 aa18.25■□□□□ 0.51
PTCHD3P3-201ENST00000403073 JAKMIP2Q96AA8 810 aa18.25■□□□□ 0.51
PTCHD3P3-201ENST00000403073 FAM81BQ96LP2 452 aa18.25■□□□□ 0.51
PTCHD3P3-201ENST00000403073 PCMTD1Q96MG8 357 aaPredicted RBP18.25■□□□□ 0.51
PTCHD3P3-201ENST00000403073 KCNK16Q96T55 309 aa18.25■□□□□ 0.51
PTCHD3P3-201ENST00000403073 FAM207AQ9NSI2 230 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms