RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 RPL10AP62906 217 aaKnown RBP15.66■□□□□ 0.1
VAMP1-203ENST00000400911 ZNF77Q15935 545 aa15.66■□□□□ 0.1
VAMP1-203ENST00000400911 EML3Q32P44 896 aa15.66■□□□□ 0.1
VAMP1-203ENST00000400911 DAB2IPQ5VWQ8 1189 aa15.66■□□□□ 0.1
VAMP1-203ENST00000400911 SCARA3Q6AZY7 606 aa15.66■□□□□ 0.1
VAMP1-203ENST00000400911 POMGNT1Q8WZA1 660 aa15.66■□□□□ 0.1
VAMP1-203ENST00000400911 ATP2A3Q93084 1043 aa15.66■□□□□ 0.1
VAMP1-203ENST00000400911 ZNF560Q96MR9 790 aa15.66■□□□□ 0.1
VAMP1-203ENST00000400911 LINC00597Q9H2U6 94 aa15.66■□□□□ 0.1
VAMP1-203ENST00000400911 DDX43Q9NXZ2 648 aaKnown RBP15.66■□□□□ 0.1
VAMP1-203ENST00000400911 L1RE1Q9UN81 338 aa15.66■□□□□ 0.1
VAMP1-203ENST00000400911 AGAP1Q9UPQ3 857 aa15.66■□□□□ 0.1
VAMP1-203ENST00000400911 KIF3AQ9Y496 699 aa15.66■□□□□ 0.1
VAMP1-203ENST00000400911 TRAV19A0A0A6YYK7 116 aa15.65■□□□□ 0.1
VAMP1-203ENST00000400911 IL18RAPO95256 599 aa15.65■□□□□ 0.1
VAMP1-203ENST00000400911 CKMP06732 381 aa15.65■□□□□ 0.1
VAMP1-203ENST00000400911 USP17L7P0C7H9 530 aa15.65■□□□□ 0.1
VAMP1-203ENST00000400911 SPINK2P20155 84 aa15.65■□□□□ 0.1
VAMP1-203ENST00000400911 POLR2BP30876 1174 aaKnown RBP15.65■□□□□ 0.1
VAMP1-203ENST00000400911 PNPLA4P41247 253 aa15.65■□□□□ 0.1
VAMP1-203ENST00000400911 WNT7BP56706 349 aa15.65■□□□□ 0.1
VAMP1-203ENST00000400911 TFAMQ00059 246 aaKnown RBP15.65■□□□□ 0.1
VAMP1-203ENST00000400911 POU5F1Q01860 360 aaKnown RBP15.65■□□□□ 0.1
VAMP1-203ENST00000400911 CCDC142Q17RM4 750 aa15.65■□□□□ 0.1
VAMP1-203ENST00000400911 USP39Q53GS9 565 aaKnown RBP15.65■□□□□ 0.1
VAMP1-203ENST00000400911 SH3PXD2AQ5TCZ1 1133 aa15.65■□□□□ 0.1
VAMP1-203ENST00000400911 UNQ6494/PRO21346Q6UXR6 183 aa15.65■□□□□ 0.1
VAMP1-203ENST00000400911 ARL14EPQ8N8R7 260 aaPredicted RBP15.65■□□□□ 0.1
VAMP1-203ENST00000400911 TSTD1Q8NFU3 115 aa15.65■□□□□ 0.1
VAMP1-203ENST00000400911 RASSF8Q8NHQ8 419 aa15.65■□□□□ 0.1
VAMP1-203ENST00000400911 SH3RF2Q8TEC5 729 aa15.65■□□□□ 0.1
VAMP1-203ENST00000400911 LEO1Q8WVC0 666 aaPredicted RBP15.65■□□□□ 0.1
VAMP1-203ENST00000400911 ACDQ96AP0 544 aa15.65■□□□□ 0.1
VAMP1-203ENST00000400911 MYRFLQ96LU7 910 aa15.65■□□□□ 0.1
VAMP1-203ENST00000400911 ACBD6Q9BR61 282 aa15.65■□□□□ 0.1
VAMP1-203ENST00000400911 ABCB6Q9NP58 842 aa15.65■□□□□ 0.1
VAMP1-203ENST00000400911 GTF3C4Q9UKN8 822 aa15.65■□□□□ 0.1
VAMP1-203ENST00000400911 CITO14578 2027 aa15.65■□□□□ 0.1
VAMP1-203ENST00000400911 C2orf78A6NCI8 922 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 ANTXRLA6NF34 631 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 H3BQV1 296 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 KHNYNO15037 678 aaKnown RBP15.64■□□□□ 0.09
VAMP1-203ENST00000400911 HUS1O60921 280 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 DDIT3P35638 169 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 SEC13P55735 322 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 GRIN1Q05586 938 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 ZNF252P-AS1Q0IIN9 211 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 FOXC1Q12948 553 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 NR1H3Q13133 447 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 C2orf27AQ580R0 203 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 INTS6LQ5JSJ4 861 aaKnown RBP15.64■□□□□ 0.09
VAMP1-203ENST00000400911 PMS2CLQ68D20 193 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 ZNF720Q7Z2F6 126 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 NT5DC4Q86YG4 428 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 ZSWIM2Q8NEG5 633 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 TRMT2BQ96GJ1 504 aaKnown RBP15.64■□□□□ 0.09
VAMP1-203ENST00000400911 PKMYT1Q99640 499 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 FAM213AQ9BRX8 229 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 TPSD1Q9BZJ3 242 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 CEP295Q9C0D2 2601 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 ST6GALNAC4Q9H4F1 302 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 TMEM206Q9H813 350 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 GCNT4Q9P109 453 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 ZMIZ1Q9ULJ6 1067 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 WASF3Q9UPY6 502 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 SDK1Q7Z5N4 2213 aa15.64■□□□□ 0.09
VAMP1-203ENST00000400911 PATE3B3GLJ2 98 aa15.63■□□□□ 0.09
VAMP1-203ENST00000400911 K7EQS6 105 aa15.63■□□□□ 0.09
VAMP1-203ENST00000400911 HCRTO43612 131 aa15.63■□□□□ 0.09
VAMP1-203ENST00000400911 TOP3BO95985 862 aaKnown RBP15.63■□□□□ 0.09
VAMP1-203ENST00000400911 ITGB3P05106 788 aa15.63■□□□□ 0.09
VAMP1-203ENST00000400911 MYL7Q01449 175 aa15.63■□□□□ 0.09
VAMP1-203ENST00000400911 KCNA1Q09470 495 aa15.63■□□□□ 0.09
VAMP1-203ENST00000400911 USP4Q13107 963 aa15.63■□□□□ 0.09
VAMP1-203ENST00000400911 POSTNQ15063 836 aa15.63■□□□□ 0.09
VAMP1-203ENST00000400911 ANO7Q6IWH7 933 aa15.63■□□□□ 0.09
VAMP1-203ENST00000400911 OSTM1Q86WC4 334 aa15.63■□□□□ 0.09
VAMP1-203ENST00000400911 SPATA2LQ8IUW3 424 aaPredicted RBP15.63■□□□□ 0.09
VAMP1-203ENST00000400911 SCN4BQ8IWT1 228 aa15.63■□□□□ 0.09
VAMP1-203ENST00000400911 CSGALNACT2Q8N6G5 542 aa15.63■□□□□ 0.09
VAMP1-203ENST00000400911 C1orf127Q8N9H9 656 aa15.63■□□□□ 0.09
VAMP1-203ENST00000400911 KRI1Q8N9T8 703 aaKnown RBP15.63■□□□□ 0.09
VAMP1-203ENST00000400911 FSIP1Q8NA03 581 aa15.63■□□□□ 0.09
VAMP1-203ENST00000400911 USP33Q8TEY7 942 aa15.63■□□□□ 0.09
VAMP1-203ENST00000400911 LARP4BQ92615 738 aaKnown RBP15.63■□□□□ 0.09
VAMP1-203ENST00000400911 FAM84AQ96KN4 292 aa15.63■□□□□ 0.09
VAMP1-203ENST00000400911 TMEM9BQ9NQ34 198 aa15.63■□□□□ 0.09
VAMP1-203ENST00000400911 CNOT1A5YKK6 2376 aaKnown RBP15.62■□□□□ 0.09
VAMP1-203ENST00000400911 CDX4O14627 284 aaPredicted RBP15.62■□□□□ 0.09
VAMP1-203ENST00000400911 NEFLP07196 543 aa15.62■□□□□ 0.09
VAMP1-203ENST00000400911 HDCP19113 662 aa15.62■□□□□ 0.09
VAMP1-203ENST00000400911 BCKDHBP21953 392 aa15.62■□□□□ 0.09
VAMP1-203ENST00000400911 LONP1P36776 959 aaKnown RBP15.62■□□□□ 0.09
VAMP1-203ENST00000400911 IRX4P78413 519 aa15.62■□□□□ 0.09
VAMP1-203ENST00000400911 ZXDBP98169 803 aa15.62■□□□□ 0.09
VAMP1-203ENST00000400911 DYMQ7RTS9 669 aa15.62■□□□□ 0.09
VAMP1-203ENST00000400911 C11orf74Q86VG3 221 aa15.62■□□□□ 0.09
VAMP1-203ENST00000400911 TTC30AQ86WT1 665 aa15.62■□□□□ 0.09
VAMP1-203ENST00000400911 SFR1Q86XK3 245 aa15.62■□□□□ 0.09
VAMP1-203ENST00000400911 TMEM86AQ8N2M4 240 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms