RNA–Protein interactions for RNA: ENST00000400907.6

RERE-203, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 5 BASIC

Gene RERE, Length 2,973 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-203ENST00000400907 MAMDC4Q6UXC1 1216 aa8.38□□□□□ -1.07
RERE-203ENST00000400907 ARHGAP22Q7Z5H3 698 aa8.38□□□□□ -1.07
RERE-203ENST00000400907 FRMD5Q7Z6J6 570 aa8.38□□□□□ -1.07
RERE-203ENST00000400907 RPUSD2Q8IZ73 545 aaKnown RBP8.38□□□□□ -1.07
RERE-203ENST00000400907 AGGF1Q8N302 714 aaeCLIP8.38□□□□□ -1.071e-9■■■■■ 31.6
RERE-203ENST00000400907 RBBP8NLQ8NC74 664 aaPredicted RBP8.38□□□□□ -1.07
RERE-203ENST00000400907 RBM41Q96IZ5 413 aaKnown RBP8.38□□□□□ -1.07
RERE-203ENST00000400907 PCYT2Q99447 389 aa8.38□□□□□ -1.07
RERE-203ENST00000400907 GPR20Q99678 358 aa8.38□□□□□ -1.07
RERE-203ENST00000400907 DIS3Q9Y2L1 958 aaKnown RBP8.38□□□□□ -1.07
RERE-203ENST00000400907 UBE4BO95155 1302 aa8.38□□□□□ -1.07
RERE-203ENST00000400907 FOXN3O00409 490 aaPredicted RBP8.37□□□□□ -1.07
RERE-203ENST00000400907 NVLO15381 856 aaKnown RBP8.37□□□□□ -1.07
RERE-203ENST00000400907 CALUO43852 315 aaPredicted RBP8.37□□□□□ -1.07
RERE-203ENST00000400907 C6orf222P0C671 652 aaPredicted RBP8.37□□□□□ -1.07
RERE-203ENST00000400907 HSPA6P17066 643 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 CMPK2Q5EBM0 449 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 DSTYKQ6XUX3 929 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 METTL3Q86U44 580 aaKnown RBP8.37□□□□□ -1.07
RERE-203ENST00000400907 PARP2Q9UGN5 583 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 DOCK5Q9H7D0 1870 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 NFASCO94856 1347 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 MKI67P46013 3256 aaKnown RBP8.37□□□□□ -1.07
RERE-203ENST00000400907 K7ENM7 598 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 SPAG7O75391 227 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 SOX5P35711 763 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 COILP38432 576 aaPredicted RBP8.37□□□□□ -1.07
RERE-203ENST00000400907 YARSP54577 528 aaKnown RBP8.37□□□□□ -1.07
RERE-203ENST00000400907 ARHGAP1Q07960 439 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 CUL3Q13618 768 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 MFSD14CQ5VZR4 134 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 HS2ST1Q7LGA3 356 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 C4orf19Q8IY42 314 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 PPM1KQ8N3J5 372 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 TAB3Q8N5C8 712 aaPredicted RBP8.37□□□□□ -1.07
RERE-203ENST00000400907 TMEM143Q96AN5 459 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 RUNDC3BQ96NL0 473 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 MIPEPQ99797 713 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 DDX50Q9BQ39 737 aaKnown RBP8.37□□□□□ -1.07
RERE-203ENST00000400907 SYT11Q9BT88 431 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 GPR88Q9GZN0 384 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 KATNBL1Q9H079 304 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 RNPEPQ9H4A4 650 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.37□□□□□ -1.073e-6■■□□□ 12.6
RERE-203ENST00000400907 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.37□□□□□ -1.077e-6■□□□□ 8.9
RERE-203ENST00000400907 TGFB1I1O43294 461 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 ADCY3O60266 1144 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 MTM1Q13496 603 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 LAMC2Q13753 1193 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 SETDB1Q15047 1291 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 SIX1Q15475 284 aaPredicted RBP8.37□□□□□ -1.07
RERE-203ENST00000400907 NFIL3Q16649 462 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 BMT2Q1RMZ1 405 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 DUSP28Q4G0W2 176 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 SNX30Q5VWJ9 437 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 LLGL2Q6P1M3 1020 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 C1orf186Q6ZWK4 172 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 TRMT10CQ7L0Y3 403 aaKnown RBP8.37□□□□□ -1.07
RERE-203ENST00000400907 TLK2Q86UE8 772 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 ZC3H18Q86VM9 953 aaKnown RBP8.37□□□□□ -1.07
RERE-203ENST00000400907 LRRC71Q8N4P6 559 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 LRRC8CQ8TDW0 803 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 MORC4Q8TE76 937 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 SCG3Q8WXD2 468 aaKnown RBP8.37□□□□□ -1.07
RERE-203ENST00000400907 USP6NLQ92738 828 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 CBWD1Q9BRT8 395 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 SEL1LQ9UBV2 794 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 GRID1Q9ULK0 1009 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 PHTF1Q9UMS5 762 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 NAALADL1Q9UQQ1 740 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 TRAF3IP3Q9Y228 551 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 GINS2Q9Y248 185 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 FRMD4BQ9Y2L6 1034 aa8.37□□□□□ -1.07
RERE-203ENST00000400907 ATP8B3O60423 1300 aa8.36□□□□□ -1.07
RERE-203ENST00000400907 ZNFX1Q9P2E3 1918 aaKnown RBP8.36□□□□□ -1.07
RERE-203ENST00000400907 EIF3DO15371 548 aaKnown RBP eCLIP8.36□□□□□ -1.07
RERE-203ENST00000400907 FKTNO75072 461 aa8.36□□□□□ -1.07
RERE-203ENST00000400907 KRT36O76013 467 aa8.36□□□□□ -1.07
RERE-203ENST00000400907 TTC4O95801 387 aa8.36□□□□□ -1.07
RERE-203ENST00000400907 MYL3P08590 195 aa8.36□□□□□ -1.07
RERE-203ENST00000400907 HOXC6P09630 235 aa8.36□□□□□ -1.07
RERE-203ENST00000400907 ZNF865P0CJ78 1059 aaPredicted RBP8.36□□□□□ -1.07
RERE-203ENST00000400907 DLATP10515 647 aaKnown RBP8.36□□□□□ -1.07
RERE-203ENST00000400907 PRKAR2AP13861 404 aaKnown RBP8.36□□□□□ -1.07
RERE-203ENST00000400907 COMTP21964 271 aa8.36□□□□□ -1.07
RERE-203ENST00000400907 RPL13P26373 211 aaKnown RBP8.36□□□□□ -1.07
RERE-203ENST00000400907 ANXA13P27216 316 aa8.36□□□□□ -1.07
RERE-203ENST00000400907 CACNA2D1P54289 1103 aa8.36□□□□□ -1.07
RERE-203ENST00000400907 PEX3P56589 373 aa8.36□□□□□ -1.07
RERE-203ENST00000400907 CACNB2Q08289 660 aaPredicted RBP8.36□□□□□ -1.07
RERE-203ENST00000400907 CALCOCO2Q13137 446 aa8.36□□□□□ -1.07
RERE-203ENST00000400907 HP1BP3Q5SSJ5 553 aaPredicted RBP8.36□□□□□ -1.07
RERE-203ENST00000400907 FAM160B1Q5W0V3 765 aa8.36□□□□□ -1.07
RERE-203ENST00000400907 IRGCQ6NXR0 463 aa8.36□□□□□ -1.07
RERE-203ENST00000400907 ARHGEF18Q6ZSZ5 1173 aa8.36□□□□□ -1.07
RERE-203ENST00000400907 C1orf54Q8WWF1 131 aa8.36□□□□□ -1.07
RERE-203ENST00000400907 INPP5DQ92835 1189 aa8.36□□□□□ -1.07
RERE-203ENST00000400907 ZSWIM1Q9BR11 485 aa8.36□□□□□ -1.07
RERE-203ENST00000400907 VCXQ9H320 206 aa8.36□□□□□ -1.07
RERE-203ENST00000400907 DCLRE1BQ9H816 532 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms