RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 CSH1P0DML2 217 aa16.96■□□□□ 0.31
ATG4B-203ENST00000400772 CSH2P0DML3 217 aa16.96■□□□□ 0.31
ATG4B-203ENST00000400772 ATICP31939 592 aa16.96■□□□□ 0.31
ATG4B-203ENST00000400772 GNL1P36915 607 aaPredicted RBP16.96■□□□□ 0.31
ATG4B-203ENST00000400772 RPL10AP62906 217 aaKnown RBP16.96■□□□□ 0.31
ATG4B-203ENST00000400772 FCHO2Q0JRZ9 810 aa16.96■□□□□ 0.31
ATG4B-203ENST00000400772 FZD5Q13467 585 aa16.96■□□□□ 0.31
ATG4B-203ENST00000400772 C1orf220Q5T0J3 134 aa16.96■□□□□ 0.31
ATG4B-203ENST00000400772 ZNF687Q8N1G0 1237 aa16.96■□□□□ 0.31
ATG4B-203ENST00000400772 ENGASEQ8NFI3 743 aa16.96■□□□□ 0.31
ATG4B-203ENST00000400772 ELMO3Q96BJ8 720 aa16.96■□□□□ 0.31
ATG4B-203ENST00000400772 OSBPL6Q9BZF3 934 aa16.96■□□□□ 0.31
ATG4B-203ENST00000400772 VRTNQ9H8Y1 702 aa16.96■□□□□ 0.31
ATG4B-203ENST00000400772 MAGED2Q9UNF1 606 aaPredicted RBP16.96■□□□□ 0.31
ATG4B-203ENST00000400772 SLC38A8A6NNN8 435 aa16.95■□□□□ 0.3
ATG4B-203ENST00000400772 CALUO43852 315 aaPredicted RBP16.95■□□□□ 0.3
ATG4B-203ENST00000400772 PHACTR2O75167 634 aa16.95■□□□□ 0.3
ATG4B-203ENST00000400772 TADA3O75528 432 aa16.95■□□□□ 0.3
ATG4B-203ENST00000400772 TARSP26639 723 aaKnown RBP16.95■□□□□ 0.3
ATG4B-203ENST00000400772 MAGEA11P43364 429 aa16.95■□□□□ 0.3
ATG4B-203ENST00000400772 AP3M2P53677 418 aa16.95■□□□□ 0.3
ATG4B-203ENST00000400772 TNNC1P63316 161 aa16.95■□□□□ 0.3
ATG4B-203ENST00000400772 PNOCQ13519 176 aa16.95■□□□□ 0.3
ATG4B-203ENST00000400772 UBXN2BQ14CS0 331 aa16.95■□□□□ 0.3
ATG4B-203ENST00000400772 NFIL3Q16649 462 aa16.95■□□□□ 0.3
ATG4B-203ENST00000400772 CEP135Q66GS9 1140 aa16.95■□□□□ 0.3
ATG4B-203ENST00000400772 GUF1Q8N442 669 aaKnown RBP16.95■□□□□ 0.3
ATG4B-203ENST00000400772 OR6B3Q8NGW1 331 aa16.95■□□□□ 0.3
ATG4B-203ENST00000400772 MYCBPAPQ8TBZ2 947 aa16.95■□□□□ 0.3
ATG4B-203ENST00000400772 TMC2Q8TDI7 906 aa16.95■□□□□ 0.3
ATG4B-203ENST00000400772 CCDC47Q96A33 483 aaKnown RBP16.95■□□□□ 0.3
ATG4B-203ENST00000400772 SYAP1Q96A49 352 aaPredicted RBP16.95■□□□□ 0.3
ATG4B-203ENST00000400772 PCED1BQ96HM7 432 aa16.95■□□□□ 0.3
ATG4B-203ENST00000400772 MYRFLQ96LU7 910 aa16.95■□□□□ 0.3
ATG4B-203ENST00000400772 SMG9Q9H0W8 520 aaKnown RBP16.95■□□□□ 0.3
ATG4B-203ENST00000400772 SNX25Q9H3E2 840 aa16.95■□□□□ 0.3
ATG4B-203ENST00000400772 DPEP3Q9H4B8 488 aa16.95■□□□□ 0.3
ATG4B-203ENST00000400772 OBP2AQ9NY56 170 aa16.95■□□□□ 0.3
ATG4B-203ENST00000400772 MAGEC2Q9UBF1 373 aaPredicted RBP16.95■□□□□ 0.3
ATG4B-203ENST00000400772 NXF1Q9UBU9 619 aaKnown RBP16.95■□□□□ 0.3
ATG4B-203ENST00000400772 COL4A2P08572 1712 aa16.95■□□□□ 0.3
ATG4B-203ENST00000400772 PROB1E7EW31 1015 aa16.94■□□□□ 0.3
ATG4B-203ENST00000400772 CHADO15335 359 aa16.94■□□□□ 0.3
ATG4B-203ENST00000400772 AKAP3O75969 853 aa16.94■□□□□ 0.3
ATG4B-203ENST00000400772 KIF20AO95235 890 aa16.94■□□□□ 0.3
ATG4B-203ENST00000400772 BDNFP23560 247 aa16.94■□□□□ 0.3
ATG4B-203ENST00000400772 NBL1P41271 181 aa16.94■□□□□ 0.3
ATG4B-203ENST00000400772 CDH8P55286 799 aa16.94■□□□□ 0.3
ATG4B-203ENST00000400772 BIRC3Q13489 604 aa16.94■□□□□ 0.3
ATG4B-203ENST00000400772 NCOA4Q13772 614 aa16.94■□□□□ 0.3
ATG4B-203ENST00000400772 ZACNQ401N2 412 aa16.94■□□□□ 0.3
ATG4B-203ENST00000400772 TXNDC8Q6A555 127 aa16.94■□□□□ 0.3
ATG4B-203ENST00000400772 ZNF852Q6ZMS4 543 aa16.94■□□□□ 0.3
ATG4B-203ENST00000400772 C4orf50Q6ZRC1 276 aa16.94■□□□□ 0.3
ATG4B-203ENST00000400772 SCN4BQ8IWT1 228 aa16.94■□□□□ 0.3
ATG4B-203ENST00000400772 SMYD4Q8IYR2 804 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-203ENST00000400772 MAML2Q8IZL2 1156 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-203ENST00000400772 CMTM8Q8IZV2 173 aa16.94■□□□□ 0.3
ATG4B-203ENST00000400772 MAB21L3Q8N8X9 362 aa16.94■□□□□ 0.3
ATG4B-203ENST00000400772 CLDN23Q96B33 292 aa16.94■□□□□ 0.3
ATG4B-203ENST00000400772 TRMT2BQ96GJ1 504 aaKnown RBP16.94■□□□□ 0.3
ATG4B-203ENST00000400772 GCNAQ96QF7 691 aa16.94■□□□□ 0.3
ATG4B-203ENST00000400772 NELL2Q99435 816 aa16.94■□□□□ 0.3
ATG4B-203ENST00000400772 SDCBP2Q9H190 292 aa16.94■□□□□ 0.3
ATG4B-203ENST00000400772 NUP210Q8TEM1 1887 aaPredicted RBP16.93■□□□□ 0.3
ATG4B-203ENST00000400772 DPYSL4O14531 572 aa16.93■□□□□ 0.3
ATG4B-203ENST00000400772 IKBKBO14920 756 aa16.93■□□□□ 0.3
ATG4B-203ENST00000400772 MAPK13O15264 365 aa16.93■□□□□ 0.3
ATG4B-203ENST00000400772 PTPN1P18031 435 aaKnown RBP16.93■□□□□ 0.3
ATG4B-203ENST00000400772 NR2F2P24468 414 aa16.93■□□□□ 0.3
ATG4B-203ENST00000400772 DDX6P26196 483 aaKnown RBP eCLIP16.93■□□□□ 0.3
ATG4B-203ENST00000400772 CYP27A1Q02318 531 aa16.93■□□□□ 0.3
ATG4B-203ENST00000400772 MAPRE1Q15691 268 aaKnown RBP16.93■□□□□ 0.3
ATG4B-203ENST00000400772 ZCWPW2Q504Y3 356 aa16.93■□□□□ 0.3
ATG4B-203ENST00000400772 MDH1BQ5I0G3 518 aa16.93■□□□□ 0.3
ATG4B-203ENST00000400772 VSTM1Q6UX27 236 aa16.93■□□□□ 0.3
ATG4B-203ENST00000400772 SV2AQ7L0J3 742 aa16.93■□□□□ 0.3
ATG4B-203ENST00000400772 C1orf210Q8IVY1 113 aa16.93■□□□□ 0.3
ATG4B-203ENST00000400772 YAF2Q8IY57 180 aa16.93■□□□□ 0.3
ATG4B-203ENST00000400772 ZFYVE19Q96K21 471 aa16.93■□□□□ 0.3
ATG4B-203ENST00000400772 SPATA17Q96L03 361 aa16.93■□□□□ 0.3
ATG4B-203ENST00000400772 SMYD3Q9H7B4 428 aa16.93■□□□□ 0.3
ATG4B-203ENST00000400772 FRMD4BQ9Y2L6 1034 aa16.93■□□□□ 0.3
ATG4B-203ENST00000400772 DENND4CQ5VZ89 1909 aa16.93■□□□□ 0.3
ATG4B-203ENST00000400772 F5P12259 2224 aa16.93■□□□□ 0.3
ATG4B-203ENST00000400772 PIEZO1Q92508 2521 aa16.93■□□□□ 0.3
ATG4B-203ENST00000400772 TICRRQ7Z2Z1 1910 aa16.92■□□□□ 0.3
ATG4B-203ENST00000400772 CACNA1IQ9P0X4 2223 aa16.92■□□□□ 0.3
ATG4B-203ENST00000400772 SOBPA7XYQ1 873 aa16.92■□□□□ 0.3
ATG4B-203ENST00000400772 A8MXQ7 604 aa16.92■□□□□ 0.3
ATG4B-203ENST00000400772 MAN2B1O00754 1011 aa16.92■□□□□ 0.3
ATG4B-203ENST00000400772 GRIK1P39086 918 aa16.92■□□□□ 0.3
ATG4B-203ENST00000400772 RAP1GAPP47736 663 aa16.92■□□□□ 0.3
ATG4B-203ENST00000400772 VAMP7P51809 220 aa16.92■□□□□ 0.3
ATG4B-203ENST00000400772 CACNA2D1P54289 1103 aa16.92■□□□□ 0.3
ATG4B-203ENST00000400772 MLLT6P55198 1093 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-203ENST00000400772 MCCD1P59942 119 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-203ENST00000400772 ZNF699Q32M78 642 aa16.92■□□□□ 0.3
ATG4B-203ENST00000400772 FRMD5Q7Z6J6 570 aa16.92■□□□□ 0.3
ATG4B-203ENST00000400772 MON1AQ86VX9 555 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms