RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 PGM2Q96G03 612 aa8.7□□□□□ -1.02
CHD8-201ENST00000399982 ERGIC2Q96RQ1 377 aa8.7□□□□□ -1.02
CHD8-201ENST00000399982 PAIP1Q9H074 479 aaKnown RBP8.7□□□□□ -1.02
CHD8-201ENST00000399982 SERHL2Q9H4I8 314 aa8.7□□□□□ -1.02
CHD8-201ENST00000399982 SERHLQ9NQF3 203 aa8.7□□□□□ -1.02
CHD8-201ENST00000399982 RBM12Q9NTZ6 932 aaKnown RBP8.7□□□□□ -1.02
CHD8-201ENST00000399982 PAK5Q9P286 719 aa8.7□□□□□ -1.02
CHD8-201ENST00000399982 TPRKBQ9Y3C4 175 aa8.7□□□□□ -1.02
CHD8-201ENST00000399982 SAMD9Q5K651 1589 aa8.7□□□□□ -1.02
CHD8-201ENST00000399982 TRIM43BA6NCK2 446 aa8.7□□□□□ -1.02
CHD8-201ENST00000399982 GSTM1P09488 218 aa8.7□□□□□ -1.02
CHD8-201ENST00000399982 IL2RBP14784 551 aa8.7□□□□□ -1.02
CHD8-201ENST00000399982 FGFR4P22455 802 aa8.7□□□□□ -1.02
CHD8-201ENST00000399982 SCARA3Q6AZY7 606 aa8.7□□□□□ -1.02
CHD8-201ENST00000399982 PDPRQ8NCN5 879 aa8.7□□□□□ -1.02
CHD8-201ENST00000399982 ARHGEF26Q96DR7 871 aa8.7□□□□□ -1.02
CHD8-201ENST00000399982 PRKD2Q9BZL6 878 aa8.7□□□□□ -1.02
CHD8-201ENST00000399982 SPEF1Q9Y4P9 236 aa8.7□□□□□ -1.02
CHD8-201ENST00000399982 ENO3P13929 434 aaPredicted RBP8.7□□□□□ -1.02
CHD8-201ENST00000399982 CCNA1P78396 465 aa8.7□□□□□ -1.02
CHD8-201ENST00000399982 GRSF1Q12849 480 aaKnown RBP eCLIP8.7□□□□□ -1.02
CHD8-201ENST00000399982 RBM43Q6ZSC3 357 aaKnown RBP8.7□□□□□ -1.02
CHD8-201ENST00000399982 CAMKK1Q8N5S9 505 aa8.7□□□□□ -1.02
CHD8-201ENST00000399982 MINDY2Q8NBR6 621 aa8.7□□□□□ -1.02
CHD8-201ENST00000399982 CFAP74Q9C0B2 1584 aa8.7□□□□□ -1.02
CHD8-201ENST00000399982 CCSER1Q9C0I3 900 aa8.7□□□□□ -1.02
CHD8-201ENST00000399982 ZDHHC9Q9Y397 364 aa8.7□□□□□ -1.02
CHD8-201ENST00000399982 PDHA2P29803 388 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 HOXC9P31274 260 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 NFX1Q12986 1120 aaKnown RBP8.69□□□□□ -1.02
CHD8-201ENST00000399982 EIF2S3LQ2VIR3 472 aaKnown RBP8.69□□□□□ -1.02
CHD8-201ENST00000399982 MZT2BQ6NZ67 158 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 PRR23CQ6ZRP0 262 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 B3GALT6Q96L58 329 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 FAM20AQ96MK3 541 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 AVENQ9NQS1 362 aaPredicted RBP8.69□□□□□ -1.02
CHD8-201ENST00000399982 PCDHB6Q9Y5E3 794 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 SNAPC5O75971 98 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 CDH3P22223 829 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 STILQ15468 1287 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 OOSP2Q86WS3 158 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 ANKS1AQ92625 1134 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 BDH2Q9BUT1 245 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 UBE2OQ9C0C9 1292 aaKnown RBP8.69□□□□□ -1.02
CHD8-201ENST00000399982 ASAP1Q9ULH1 1129 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 STAP1Q9ULZ2 295 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 DENND4BO75064 1496 aaPredicted RBP8.69□□□□□ -1.02
CHD8-201ENST00000399982 MYL4P12829 197 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 STAT5AP42229 794 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 MAGEA4P43358 317 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 STAT5BP51692 787 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 CHN2P52757 468 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 BCAR1P56945 870 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 KCNK10P57789 538 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 FBXO42Q6P3S6 717 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 ARHGEF19Q8IW93 802 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 NFATC2IPQ8NCF5 419 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 MCPH1Q8NEM0 835 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 C9orf16Q9BUW7 83 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 ILKAPQ9H0C8 392 aaPredicted RBP8.69□□□□□ -1.02
CHD8-201ENST00000399982 KCND2Q9NZV8 630 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 SLC9A2Q9UBY0 812 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 PCDHB8Q9UN66 801 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 RAD51CO43502 376 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 PCCAP05165 728 aaPredicted RBP8.69□□□□□ -1.02
CHD8-201ENST00000399982 CHI3L1P36222 383 aaPredicted RBP8.69□□□□□ -1.02
CHD8-201ENST00000399982 STX4Q12846 297 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 CWF19L1Q69YN2 538 aaKnown RBP8.69□□□□□ -1.02
CHD8-201ENST00000399982 TBCKQ8TEA7 893 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 RAD54LQ92698 747 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 IL1RL2Q9HB29 575 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 CCDC59Q9P031 241 aaKnown RBP8.69□□□□□ -1.02
CHD8-201ENST00000399982 STK39Q9UEW8 545 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 ACTL7BQ9Y614 415 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 A0A0A6YYK5 440 aaPredicted RBP8.69□□□□□ -1.02
CHD8-201ENST00000399982 ST8SIA6P61647 398 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 MAPK7Q13164 816 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 PTK7Q13308 1070 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 PIGHQ14442 188 aaPredicted RBP8.69□□□□□ -1.02
CHD8-201ENST00000399982 IRAK1BP1Q5VVH5 260 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 TRIQKQ629K1 86 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 LRRC71Q8N4P6 559 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 OTUD5Q96G74 571 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 CRNNQ9UBG3 495 aaPredicted RBP8.69□□□□□ -1.02
CHD8-201ENST00000399982 FANCAO15360 1455 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 MAP2K7O14733 419 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 PHGDHO43175 533 aaKnown RBP8.69□□□□□ -1.02
CHD8-201ENST00000399982 GLRA3O75311 464 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 FTLP02792 175 aaPredicted RBP8.69□□□□□ -1.02
CHD8-201ENST00000399982 TARSP26639 723 aaKnown RBP8.69□□□□□ -1.02
CHD8-201ENST00000399982 MZF1P28698 734 aaPredicted RBP8.69□□□□□ -1.02
CHD8-201ENST00000399982 ACTR2P61160 394 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 CHRNB3Q05901 458 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 SDE2Q6IQ49 451 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 SLC44A2Q8IWA5 706 aaPredicted RBP8.69□□□□□ -1.02
CHD8-201ENST00000399982 REXO1L1PQ8IX06 675 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 SHCBP1Q8NEM2 672 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 IPCEF1Q8WWN9 437 aaPredicted RBP8.69□□□□□ -1.02
CHD8-201ENST00000399982 PHACTR1Q9C0D0 580 aa8.69□□□□□ -1.02
CHD8-201ENST00000399982 SLC52A2Q9HAB3 445 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms