RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 USP4Q13107 963 aa19.49■□□□□ 0.71
UFD1-202ENST00000399523 NR1H3Q13133 447 aa19.49■□□□□ 0.71
UFD1-202ENST00000399523 ANKRD1Q15327 319 aa19.49■□□□□ 0.71
UFD1-202ENST00000399523 ME3Q16798 604 aa19.49■□□□□ 0.71
UFD1-202ENST00000399523 C2orf27AQ580R0 203 aa19.49■□□□□ 0.71
UFD1-202ENST00000399523 SPDYCQ5MJ68 293 aa19.49■□□□□ 0.71
UFD1-202ENST00000399523 C19orf48Q6RUI8 117 aa19.49■□□□□ 0.71
UFD1-202ENST00000399523 THEM5Q8N1Q8 247 aa19.49■□□□□ 0.71
UFD1-202ENST00000399523 IGSF22Q8N9C0 903 aa19.49■□□□□ 0.71
UFD1-202ENST00000399523 TMEM206Q9H813 350 aa19.49■□□□□ 0.71
UFD1-202ENST00000399523 ABI2Q9NYB9 513 aaPredicted RBP19.49■□□□□ 0.71
UFD1-202ENST00000399523 WNT6Q9Y6F9 365 aa19.49■□□□□ 0.71
UFD1-202ENST00000399523 MYO18AQ92614 2054 aaKnown RBP19.48■□□□□ 0.71
UFD1-202ENST00000399523 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.48■□□□□ 0.71
UFD1-202ENST00000399523 JAK2O60674 1132 aa19.48■□□□□ 0.71
UFD1-202ENST00000399523 TADA3O75528 432 aa19.48■□□□□ 0.71
UFD1-202ENST00000399523 CSH1P0DML2 217 aa19.48■□□□□ 0.71
UFD1-202ENST00000399523 CSH2P0DML3 217 aa19.48■□□□□ 0.71
UFD1-202ENST00000399523 PTGER3P43115 390 aa19.48■□□□□ 0.71
UFD1-202ENST00000399523 FAM193AP78312 1265 aa19.48■□□□□ 0.71
UFD1-202ENST00000399523 SAFBQ15424 915 aaKnown RBP eCLIP19.48■□□□□ 0.71
UFD1-202ENST00000399523 ZNF423Q2M1K9 1284 aa19.48■□□□□ 0.71
UFD1-202ENST00000399523 PEAR1Q5VY43 1037 aaPredicted RBP19.48■□□□□ 0.71
UFD1-202ENST00000399523 METTL23Q86XA0 190 aa19.48■□□□□ 0.71
UFD1-202ENST00000399523 CD302Q8IX05 232 aa19.48■□□□□ 0.71
UFD1-202ENST00000399523 TMEFF1Q8IYR6 380 aa19.48■□□□□ 0.71
UFD1-202ENST00000399523 KCNN1Q92952 543 aa19.48■□□□□ 0.71
UFD1-202ENST00000399523 RPF1Q9H9Y2 349 aaKnown RBP19.48■□□□□ 0.71
UFD1-202ENST00000399523 PILRBQ9UKJ0 227 aa19.48■□□□□ 0.71
UFD1-202ENST00000399523 ADAMTS9Q9P2N4 1935 aa19.48■□□□□ 0.71
UFD1-202ENST00000399523 ANTXRLA6NF34 631 aa19.47■□□□□ 0.71
UFD1-202ENST00000399523 ALDH1A2O94788 518 aa19.47■□□□□ 0.71
UFD1-202ENST00000399523 HNRNPLP14866 589 aaKnown RBP eCLIP19.47■□□□□ 0.71
UFD1-202ENST00000399523 HOXD12P35452 270 aa19.47■□□□□ 0.71
UFD1-202ENST00000399523 OPRD1P41143 372 aa19.47■□□□□ 0.71
UFD1-202ENST00000399523 SEC13P55735 322 aa19.47■□□□□ 0.71
UFD1-202ENST00000399523 SCAPQ12770 1279 aa19.47■□□□□ 0.71
UFD1-202ENST00000399523 TTC38Q5R3I4 469 aa19.47■□□□□ 0.71
UFD1-202ENST00000399523 JADE1Q6IE81 842 aa19.47■□□□□ 0.71
UFD1-202ENST00000399523 TMEM92Q6UXU6 159 aa19.47■□□□□ 0.71
UFD1-202ENST00000399523 KCNK18Q7Z418 384 aa19.47■□□□□ 0.71
UFD1-202ENST00000399523 EFCAB13Q8IY85 973 aa19.47■□□□□ 0.71
UFD1-202ENST00000399523 DCP1BQ8IZD4 617 aaKnown RBP19.47■□□□□ 0.71
UFD1-202ENST00000399523 CCDC33Q8N5R6 958 aa19.47■□□□□ 0.71
UFD1-202ENST00000399523 RLN3Q8WXF3 142 aa19.47■□□□□ 0.71
UFD1-202ENST00000399523 MYRFLQ96LU7 910 aa19.47■□□□□ 0.71
UFD1-202ENST00000399523 SLC22A12Q96S37 553 aa19.47■□□□□ 0.71
UFD1-202ENST00000399523 CYP2S1Q96SQ9 504 aa19.47■□□□□ 0.71
UFD1-202ENST00000399523 UXTQ9UBK9 157 aaPredicted RBP19.47■□□□□ 0.71
UFD1-202ENST00000399523 MBD1Q9UIS9 605 aaPredicted RBP19.47■□□□□ 0.71
UFD1-202ENST00000399523 MAGED2Q9UNF1 606 aaPredicted RBP19.47■□□□□ 0.71
UFD1-202ENST00000399523 PCDHB5Q9Y5E4 795 aa19.47■□□□□ 0.71
UFD1-202ENST00000399523 URB1O60287 2271 aaKnown RBP19.47■□□□□ 0.71
UFD1-202ENST00000399523 ANAPC1Q9H1A4 1944 aa19.47■□□□□ 0.71
UFD1-202ENST00000399523 CYB561D2O14569 222 aa19.46■□□□□ 0.71
UFD1-202ENST00000399523 OGTO15294 1046 aa19.46■□□□□ 0.71
UFD1-202ENST00000399523 MAP3K13O43283 966 aa19.46■□□□□ 0.71
UFD1-202ENST00000399523 USP17L7P0C7H9 530 aa19.46■□□□□ 0.71
UFD1-202ENST00000399523 TCF3P15923 654 aa19.46■□□□□ 0.71
UFD1-202ENST00000399523 CDC25AP30304 524 aa19.46■□□□□ 0.71
UFD1-202ENST00000399523 GPR15P49685 360 aa19.46■□□□□ 0.71
UFD1-202ENST00000399523 MRPS21P82921 87 aaKnown RBP19.46■□□□□ 0.71
UFD1-202ENST00000399523 HNRNPDQ14103 355 aaKnown RBP19.46■□□□□ 0.71
UFD1-202ENST00000399523 WSCD1Q658N2 575 aa19.46■□□□□ 0.71
UFD1-202ENST00000399523 LMBRD2Q68DH5 695 aaPredicted RBP19.46■□□□□ 0.71
UFD1-202ENST00000399523 HDDC3Q8N4P3 179 aa19.46■□□□□ 0.71
UFD1-202ENST00000399523 STKLD1Q8NE28 680 aa19.46■□□□□ 0.71
UFD1-202ENST00000399523 WHAMMQ8TF30 809 aa19.46■□□□□ 0.71
UFD1-202ENST00000399523 BICD1Q96G01 975 aa19.46■□□□□ 0.71
UFD1-202ENST00000399523 TRMT2BQ96GJ1 504 aaKnown RBP19.46■□□□□ 0.71
UFD1-202ENST00000399523 SPACA7Q96KW9 195 aa19.46■□□□□ 0.71
UFD1-202ENST00000399523 CCSER1Q9C0I3 900 aa19.46■□□□□ 0.71
UFD1-202ENST00000399523 LINC00597Q9H2U6 94 aa19.46■□□□□ 0.71
UFD1-202ENST00000399523 DERAQ9Y315 318 aa19.46■□□□□ 0.71
UFD1-202ENST00000399523 TCHHQ07283 1943 aa19.46■□□□□ 0.71
UFD1-202ENST00000399523 BPTFQ12830 3046 aa19.46■□□□□ 0.71
UFD1-202ENST00000399523 TRAV19A0A0A6YYK7 116 aa19.45■□□□□ 0.7
UFD1-202ENST00000399523 NOL4O94818 638 aa19.45■□□□□ 0.7
UFD1-202ENST00000399523 NFICP08651 508 aa19.45■□□□□ 0.7
UFD1-202ENST00000399523 CHRM1P11229 460 aaPredicted RBP19.45■□□□□ 0.7
UFD1-202ENST00000399523 TRAPPC10P48553 1259 aa19.45■□□□□ 0.7
UFD1-202ENST00000399523 COL28A1Q2UY09 1125 aa19.45■□□□□ 0.7
UFD1-202ENST00000399523 GAB4Q2WGN9 574 aa19.45■□□□□ 0.7
UFD1-202ENST00000399523 MAP7D1Q3KQU3 841 aa19.45■□□□□ 0.7
UFD1-202ENST00000399523 LYSMD4Q5XG99 296 aa19.45■□□□□ 0.7
UFD1-202ENST00000399523 KRT79Q5XKE5 535 aa19.45■□□□□ 0.7
UFD1-202ENST00000399523 ARMCX6Q7L4S7 300 aa19.45■□□□□ 0.7
UFD1-202ENST00000399523 TTC30AQ86WT1 665 aa19.45■□□□□ 0.7
UFD1-202ENST00000399523 FRMD1Q8N878 549 aa19.45■□□□□ 0.7
UFD1-202ENST00000399523 PYM1Q9BRP8 204 aaKnown RBP19.45■□□□□ 0.7
UFD1-202ENST00000399523 RAB34Q9BZG1 259 aa19.45■□□□□ 0.7
UFD1-202ENST00000399523 FOXP1Q9H334 677 aaPredicted RBP19.45■□□□□ 0.7
UFD1-202ENST00000399523 TMLHEQ9NVH6 421 aa19.45■□□□□ 0.7
UFD1-202ENST00000399523 GCNT4Q9P109 453 aa19.45■□□□□ 0.7
UFD1-202ENST00000399523 SLC6A14Q9UN76 642 aa19.45■□□□□ 0.7
UFD1-202ENST00000399523 CEP192Q8TEP8 1941 aa19.45■□□□□ 0.7
UFD1-202ENST00000399523 PCDH15Q96QU1 1955 aa19.44■□□□□ 0.7
UFD1-202ENST00000399523 H0YCG3 227 aa19.44■□□□□ 0.7
UFD1-202ENST00000399523 PRPF40AO75400 957 aaKnown RBP19.44■□□□□ 0.7
UFD1-202ENST00000399523 CKMP06732 381 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms