RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 CYP3A43Q9HB55 503 aa24.27■■□□□ 1.48
RABGGTA-202ENST00000399409 FETUBQ9UGM5 382 aa24.27■■□□□ 1.48
RABGGTA-202ENST00000399409 CYTH4Q9UIA0 394 aa24.27■■□□□ 1.48
RABGGTA-202ENST00000399409 SIX4Q9UIU6 781 aa24.27■■□□□ 1.48
RABGGTA-202ENST00000399409 CXCL11O14625 94 aa24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 MGRN1O60291 552 aa24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 IFNB1P01574 187 aa24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 CXCL8P10145 99 aa24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 OTUD4Q01804 1114 aaKnown RBP24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 SF3A3Q12874 501 aaKnown RBP eCLIP24.26■■□□□ 1.472e-7■■■■■ 27.5
RABGGTA-202ENST00000399409 MTFR1Q15390 333 aa24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 GALNTL6Q49A17 601 aa24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 ZBED8Q8IZ13 594 aa24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 ARFGAP1Q8N6T3 406 aa24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 ACTL9Q8TC94 416 aa24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 TRABDQ9H4I3 376 aa24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 ANK1P16157 1881 aa24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 DNAJC25-GNG10A0A024R161 153 aa24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 LOC102724159A0A0B4J2E5 919 aa24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 VGLL3A8MV65 326 aa24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 CST8O60676 142 aa24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 PGK2P07205 417 aa24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 IREB2P48200 963 aaKnown RBP24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 MYO1EQ12965 1108 aa24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 PDIA2Q13087 525 aaKnown RBP24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 KCTD2Q14681 263 aa24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 PWP2Q15269 919 aaKnown RBP24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 HIF1AQ16665 826 aa24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 FAM187BQ17R55 369 aa24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 FAM133BQ5BKY9 247 aaKnown RBP24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 CEP120Q8N960 986 aa24.26■■□□□ 1.47
RABGGTA-202ENST00000399409 POC1B-GALNT4F8VUJ3 575 aa24.25■■□□□ 1.47
RABGGTA-202ENST00000399409 MAGEB2O15479 319 aa24.25■■□□□ 1.47
RABGGTA-202ENST00000399409 MCF2P10911 925 aa24.25■■□□□ 1.47
RABGGTA-202ENST00000399409 TAC1P20366 129 aa24.25■■□□□ 1.47
RABGGTA-202ENST00000399409 PHBP35232 272 aa24.25■■□□□ 1.47
RABGGTA-202ENST00000399409 PHKA2P46019 1235 aa24.25■■□□□ 1.47
RABGGTA-202ENST00000399409 RAP1GAPP47736 663 aa24.25■■□□□ 1.47
RABGGTA-202ENST00000399409 GABRB2P47870 512 aa24.25■■□□□ 1.47
RABGGTA-202ENST00000399409 ARL4CP56559 192 aa24.25■■□□□ 1.47
RABGGTA-202ENST00000399409 PTPN11Q06124 597 aaPredicted RBP24.25■■□□□ 1.47
RABGGTA-202ENST00000399409 FASTKD3Q14CZ7 662 aaKnown RBP24.25■■□□□ 1.47
RABGGTA-202ENST00000399409 C1orf127Q8N9H9 656 aa24.25■■□□□ 1.47
RABGGTA-202ENST00000399409 SLC4A11Q8NBS3 891 aa24.25■■□□□ 1.47
RABGGTA-202ENST00000399409 TRAPPC12Q8WVT3 735 aa24.25■■□□□ 1.47
RABGGTA-202ENST00000399409 VRTNQ9H8Y1 702 aa24.25■■□□□ 1.47
RABGGTA-202ENST00000399409 UBOX5O94941 541 aa24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 P4HA1P13674 534 aa24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 IL1R2P27930 398 aa24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 ELF3P78545 371 aaPredicted RBP24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 ACVR2BQ13705 512 aa24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 RNF43Q68DV7 783 aa24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 DENND1AQ8TEH3 1009 aa24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 RSAD2Q8WXG1 361 aa24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 MCRS1Q96EZ8 462 aa24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 SMC6Q96SB8 1091 aa24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 CPXM1Q96SM3 734 aa24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 MMP19Q99542 508 aa24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 METTL5Q9NRN9 209 aaKnown RBP24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 POLR2AP24928 1970 aaKnown RBP24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 ASMTLO95671 621 aa24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 WDR4P57081 412 aaKnown RBP24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 SPARCL1Q14515 664 aa24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 KYAT1Q16773 422 aa24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 ZNF484Q5JVG2 852 aa24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 RGS9BPQ6ZS82 235 aa24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 ERO1BQ86YB8 467 aa24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 SDCBP2Q9H190 292 aa24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 RXFP1Q9HBX9 757 aa24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 KLHL14Q9P2G3 628 aa24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 PSMC3IPQ9P2W1 217 aaPredicted RBP24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 OTOFQ9HC10 1997 aa24.24■■□□□ 1.47
RABGGTA-202ENST00000399409 LACTBL1A8MY62 500 aa24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 CILPO75339 1184 aa24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 ERBB2P04626 1255 aa24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 NFICP08651 508 aa24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 KRT15P19012 456 aa24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 CTCFP49711 727 aaPredicted RBP24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 CLCN3P51790 818 aa24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 DYNLT1P63172 113 aa24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 EFHC2Q5JST6 749 aa24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 CMASQ8NFW8 434 aaPredicted RBP24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 TMEM176AQ96HP8 235 aa24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 FAM124BQ9H5Z6 455 aaPredicted RBP24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 ASB7Q9H672 318 aa24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 ELP3Q9H9T3 547 aa24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 SSU72Q9NP77 194 aaKnown RBP24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 RNF8O76064 485 aa24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 GJB1P08034 283 aa24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 STAG3L1P0CL83 205 aa24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 TSHRP16473 764 aa24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 FOXN2P32314 431 aa24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 BNIP1Q12981 228 aa24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 ZKSCAN8Q15776 578 aaPredicted RBP24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 SMTNL2Q2TAL5 461 aa24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 ATP11CQ8NB49 1132 aa24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 KCTD6Q8NC69 237 aa24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 DCPSQ96C86 337 aaKnown RBP24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 OTUD5Q96G74 571 aa24.23■■□□□ 1.47
RABGGTA-202ENST00000399409 PITPNM3Q9BZ71 974 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms