RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 FOXR1Q6PIV2 292 aa18.65■□□□□ 0.58
HLA-DQB1-204ENST00000399084 BBS12Q6ZW61 710 aa18.65■□□□□ 0.58
HLA-DQB1-204ENST00000399084 UNC93AQ86WB7 457 aa18.65■□□□□ 0.58
HLA-DQB1-204ENST00000399084 CCDC25Q86WR0 208 aa18.65■□□□□ 0.58
HLA-DQB1-204ENST00000399084 VSIG1Q86XK7 387 aa18.65■□□□□ 0.58
HLA-DQB1-204ENST00000399084 SLC35B2Q8TB61 432 aa18.65■□□□□ 0.58
HLA-DQB1-204ENST00000399084 STK32AQ8WU08 396 aa18.65■□□□□ 0.58
HLA-DQB1-204ENST00000399084 CPB2Q96IY4 423 aa18.65■□□□□ 0.58
HLA-DQB1-204ENST00000399084 ZNF668Q96K58 619 aaPredicted RBP18.65■□□□□ 0.58
HLA-DQB1-204ENST00000399084 HEXIM2Q96MH2 286 aaKnown RBP18.65■□□□□ 0.58
HLA-DQB1-204ENST00000399084 ADAMTS10Q9H324 1103 aa18.65■□□□□ 0.58
HLA-DQB1-204ENST00000399084 CCDC134Q9H6E4 229 aa18.65■□□□□ 0.58
HLA-DQB1-204ENST00000399084 SMYD3Q9H7B4 428 aa18.65■□□□□ 0.58
HLA-DQB1-204ENST00000399084 PCDH9Q9HC56 1237 aa18.65■□□□□ 0.58
HLA-DQB1-204ENST00000399084 MBLAC1A4D2B0 266 aaPredicted RBP18.64■□□□□ 0.57
HLA-DQB1-204ENST00000399084 E7EVH7 732 aa18.64■□□□□ 0.57
HLA-DQB1-204ENST00000399084 DNALI1O14645 258 aaPredicted RBP18.64■□□□□ 0.57
HLA-DQB1-204ENST00000399084 MEFVO15553 781 aaPredicted RBP18.64■□□□□ 0.57
HLA-DQB1-204ENST00000399084 LRCH4O75427 683 aa18.64■□□□□ 0.57
HLA-DQB1-204ENST00000399084 FGFR4P22455 802 aa18.64■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CDH8P55286 799 aa18.64■□□□□ 0.57
HLA-DQB1-204ENST00000399084 SLC25A11Q02978 314 aaKnown RBP18.64■□□□□ 0.57
HLA-DQB1-204ENST00000399084 AUHQ13825 339 aaKnown RBP18.64■□□□□ 0.57
HLA-DQB1-204ENST00000399084 GJC2Q5T442 439 aaPredicted RBP18.64■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ERMARDQ5T6L9 678 aa18.64■□□□□ 0.57
HLA-DQB1-204ENST00000399084 NOTUMQ6P988 496 aa18.64■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ZDHHC17Q8IUH5 632 aa18.64■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ZNF473Q8WTR7 871 aaKnown RBP18.64■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CPXM1Q96SM3 734 aa18.64■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CNPY3Q9BT09 278 aa18.64■□□□□ 0.57
HLA-DQB1-204ENST00000399084 TPX2Q9ULW0 747 aaKnown RBP18.64■□□□□ 0.57
HLA-DQB1-204ENST00000399084 SHOC2Q9UQ13 582 aa18.64■□□□□ 0.57
HLA-DQB1-204ENST00000399084 Q9Y3F1 56 aa18.64■□□□□ 0.57
HLA-DQB1-204ENST00000399084 TLDC2A0PJX2 215 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 MYO1CO00159 1063 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 XPOTO43592 962 aaKnown RBP18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ZNF143P52747 638 aaPredicted RBP18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 NR1H3Q13133 447 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ZBTB6Q15916 424 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CYP4A22Q5TCH4 519 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 TTC19Q6DKK2 380 aaPredicted RBP18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ANKS1BQ7Z6G8 1248 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ZNF784Q8NCA9 323 aaPredicted RBP18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 BEST2Q8NFU1 509 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 RAPGEF5Q92565 580 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 KIF12Q96FN5 646 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CFAP57Q96MR6 1250 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 RSAD1Q9HA92 442 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 DNPEPQ9ULA0 475 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ACTL7BQ9Y614 415 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 C5orf60A6NFR6 353 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 C3orf70A6NLC5 250 aaPredicted RBP18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 M0QYV0 167 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 GJB6O95452 261 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 F2P00734 622 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CD4P01730 458 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 KDELR1P24390 212 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 GJC1P36383 396 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ATP13A4Q4VNC1 1196 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 XPO6Q96QU8 1125 aaKnown RBP18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CYLDQ9NQC7 956 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 LGALS13Q9UHV8 139 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CYTH4Q9UIA0 394 aa18.63■□□□□ 0.57
HLA-DQB1-204ENST00000399084 KAT6AQ92794 2004 aa18.62■□□□□ 0.57
HLA-DQB1-204ENST00000399084 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.62■□□□□ 0.57
HLA-DQB1-204ENST00000399084 GOLGA8SH3BPF8 625 aa18.62■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CDH16O75309 829 aa18.62■□□□□ 0.57
HLA-DQB1-204ENST00000399084 FAM163BP0C2L3 166 aa18.62■□□□□ 0.57
HLA-DQB1-204ENST00000399084 KRT10P13645 584 aa18.62■□□□□ 0.57
HLA-DQB1-204ENST00000399084 RAP1GAPP47736 663 aa18.62■□□□□ 0.57
HLA-DQB1-204ENST00000399084 NDST1P52848 882 aa18.62■□□□□ 0.57
HLA-DQB1-204ENST00000399084 RASA2Q15283 850 aa18.62■□□□□ 0.57
HLA-DQB1-204ENST00000399084 LLGL1Q15334 1064 aa18.62■□□□□ 0.57
HLA-DQB1-204ENST00000399084 DAB2IPQ5VWQ8 1189 aa18.62■□□□□ 0.57
HLA-DQB1-204ENST00000399084 MAP7D3Q8IWC1 876 aa18.62■□□□□ 0.57
HLA-DQB1-204ENST00000399084 USP6NLQ92738 828 aa18.62■□□□□ 0.57
HLA-DQB1-204ENST00000399084 P3H4Q92791 437 aa18.62■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ZBTB10Q96DT7 871 aa18.62■□□□□ 0.57
HLA-DQB1-204ENST00000399084 PI4K2BG5E9Z4 385 aa18.61■□□□□ 0.57
HLA-DQB1-204ENST00000399084 GPR32O75388 356 aa18.61■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ECM2O94769 699 aaPredicted RBP18.61■□□□□ 0.57
HLA-DQB1-204ENST00000399084 KIAA0754O94854 1291 aa18.61■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ERBB2P04626 1255 aa18.61■□□□□ 0.57
HLA-DQB1-204ENST00000399084 HOXA11P31270 313 aaPredicted RBP18.61■□□□□ 0.57
HLA-DQB1-204ENST00000399084 SCNN1AP37088 669 aa18.61■□□□□ 0.57
HLA-DQB1-204ENST00000399084 TFDP2Q14188 446 aa18.61■□□□□ 0.57
HLA-DQB1-204ENST00000399084 P3H1Q32P28 736 aa18.61■□□□□ 0.57
HLA-DQB1-204ENST00000399084 BOLA3Q53S33 107 aa18.61■□□□□ 0.57
HLA-DQB1-204ENST00000399084 KAZNQ674X7 775 aa18.61■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ARCQ7LC44 396 aa18.61■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CATSPER4Q7RTX7 472 aa18.61■□□□□ 0.57
HLA-DQB1-204ENST00000399084 NME8Q8N427 588 aa18.61■□□□□ 0.57
HLA-DQB1-204ENST00000399084 SNX27Q96L92 541 aa18.61■□□□□ 0.57
HLA-DQB1-204ENST00000399084 TWNKQ96RR1 684 aa18.61■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ZNF408Q9H9D4 720 aa18.61■□□□□ 0.57
HLA-DQB1-204ENST00000399084 PPANQ9NQ55 473 aaKnown RBP18.61■□□□□ 0.57
HLA-DQB1-204ENST00000399084 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.61■□□□□ 0.57
HLA-DQB1-204ENST00000399084 FAM169AQ9Y6X4 670 aa18.61■□□□□ 0.57
HLA-DQB1-204ENST00000399084 MGAMO43451 1857 aa18.61■□□□□ 0.57
HLA-DQB1-204ENST00000399084 A0A087WUV0 522 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms