RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 CEMIPQ8WUJ3 1361 aa8.7□□□□□ -1.02
SPTLC3-201ENST00000399002 NCAM2O15394 837 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 RGS2P41220 211 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 HARS2P49590 506 aaKnown RBP8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 GPAT2Q6NUI2 795 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 CYGBQ8WWM9 190 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 SH3GL1Q99961 368 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 RGL1Q9NZL6 768 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 AFF4Q9UHB7 1163 aaKnown RBP8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 TMCO1Q9UM00 188 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 PPP2R3BQ9Y5P8 575 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 NBPF26B4DH59 902 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 FKBP6O75344 327 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 FAM200BP0CF97 657 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 RARBP10826 455 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 PTGER2P43116 358 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 HPCAP84074 193 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 NFIXQ14938 502 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 TDRD10Q5VZ19 366 aaKnown RBP8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 NBPF15Q8N660 670 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 AGBL3Q8NEM8 1001 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 C19orf60Q96EN9 201 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 NR1H4Q96RI1 486 aaPredicted RBP8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 CINPQ9BW66 212 aaPredicted RBP8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 SIK2Q9H0K1 926 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 MUC3BQ9H195 1237 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 AP3M1Q9Y2T2 418 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 SNX9Q9Y5X1 595 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 VPS4BO75351 444 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 USP1O94782 785 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 NTSR2O95665 410 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 IFNA14P01570 189 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 NR3C2P08235 984 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 CYP11B2P19099 503 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 SOX6P35712 828 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 WDR49Q8IV35 697 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 ABHD8Q96I13 439 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 PRRG3Q9BZD7 231 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 EPB41L4AQ9HCS5 686 aaPredicted RBP8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 ADAM30Q9UKF2 790 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 KRT87PA6NCN2 255 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 NQO1P15559 274 aaKnown RBP8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 GRK2P25098 689 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 GNL1P36915 607 aaPredicted RBP8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 SLC26A2P50443 739 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 ZNF135P52742 658 aaPredicted RBP8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 NUP107P57740 925 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 NAA20P61599 178 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 LUZP2Q86TE4 346 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 EXD1Q8NHP7 514 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 CASKIN2Q8WXE0 1202 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 MMADHCQ9H3L0 296 aaPredicted RBP8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 ZFYVE28Q9HCC9 887 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 AGPAT3Q9NRZ7 376 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 RRN3Q9NYV6 651 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 TAGLN3Q9UI15 199 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 CHMP2BQ9UQN3 213 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 SLC4A7Q9Y6M7 1214 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 SAC3D1A6NKF1 404 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 C2orf81A6NN90 581 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 NKRFO15226 690 aaKnown RBP eCLIP8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 HOXA2O43364 376 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 CETPP11597 493 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 RARGP13631 454 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 ENO3P13929 434 aaPredicted RBP8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 CTCFP49711 727 aaPredicted RBP8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 IRAK1P51617 712 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 TFDP3Q5H9I0 405 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 PLA2G4FQ68DD2 849 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 PTRHD1Q6GMV3 140 aaKnown RBP8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 MRNIPQ6NTE8 343 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 SLC30A5Q8TAD4 765 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 PLEKHA8Q96JA3 519 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 CCT7Q99832 543 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 EMILIN2Q9BXX0 1053 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 CPVLQ9H3G5 476 aa8.69□□□□□ -1.02
SPTLC3-201ENST00000399002 PHF20L1A8MW92 1017 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 B2RBV5 119 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 PON1P27169 355 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 MYL6P60660 151 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 CNTN1Q12860 1018 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 STK4Q13043 487 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 SCARF1Q14162 830 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 SPDYAQ5MJ70 313 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 TRIM65Q6PJ69 517 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 B4GALNT2Q8NHY0 566 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 IL17RAQ96F46 866 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 VPS50Q96JG6 964 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 TBC1D13Q9NVG8 400 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 VTI1BQ9UEU0 232 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 SOX13Q9UN79 622 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 PLAGL2Q9UPG8 496 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 KAT6BQ8WYB5 2073 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 DYTNA2CJ06 578 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 ADCY3O60266 1144 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 KPNA6O60684 536 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 RHOBTB1O94844 696 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 ALBP02768 609 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 RBP1P09455 135 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms