RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 A0A1W2PPM1 405 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 SPDYE16A6NNV3 312 aaPredicted RBP13.76□□□□□ -0.21
PRAME-201ENST00000398741 CST8O60676 142 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 ZWINTO95229 277 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 KRT4P19013 534 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 UBA1P22314 1058 aaKnown RBP13.76□□□□□ -0.21
PRAME-201ENST00000398741 CLNS1AP54105 237 aaKnown RBP13.76□□□□□ -0.21
PRAME-201ENST00000398741 CNTN2Q02246 1040 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 MOGSQ13724 837 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 SLC1A5Q15758 541 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 KLHL38Q2WGJ6 581 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 LVRNQ6Q4G3 990 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 RHPN2Q8IUC4 686 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 ANKLE1Q8NAG6 615 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 NSMCE1Q8WV22 266 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 TFAP2BQ92481 460 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 MAK16Q9BXY0 300 aaKnown RBP13.76□□□□□ -0.21
PRAME-201ENST00000398741 SYNCQ9H7C4 482 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 SAE1Q9UBE0 346 aaPredicted RBP13.76□□□□□ -0.21
PRAME-201ENST00000398741 GRID1Q9ULK0 1009 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 FARP1Q9Y4F1 1045 aaPredicted RBP13.76□□□□□ -0.21
PRAME-201ENST00000398741 PHIPQ8WWQ0 1821 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 SBF1O95248 1867 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 TYROBPO43914 113 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 MSCO60682 206 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 MAFO75444 373 aaPredicted RBP13.76□□□□□ -0.21
PRAME-201ENST00000398741 TNNC2P02585 160 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 PRKCBP05771 671 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 SRGAP2CP0DJJ0 459 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 RFC1P35251 1148 aaPredicted RBP13.76□□□□□ -0.21
PRAME-201ENST00000398741 GMPSP49915 693 aaPredicted RBP13.76□□□□□ -0.21
PRAME-201ENST00000398741 GPX6P59796 221 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 FSTL1Q12841 308 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 TFDP1Q14186 410 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 TARBP2Q15633 366 aaKnown RBP13.76□□□□□ -0.21
PRAME-201ENST00000398741 KCNT1Q5JUK3 1230 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 FYB2Q5VWT5 728 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 DENND1BQ6P3S1 775 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 TLDC1Q6P9B6 456 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 PCYT2Q99447 389 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 SYT17Q9BSW7 474 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 PHACTR1Q9C0D0 580 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 CHKBQ9Y259 395 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 EFR3BQ9Y2G0 817 aa13.76□□□□□ -0.21
PRAME-201ENST00000398741 WDR81Q562E7 1941 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 DICER1Q9UPY3 1922 aaKnown RBP13.75□□□□□ -0.21
PRAME-201ENST00000398741 C3orf70A6NLC5 250 aaPredicted RBP13.75□□□□□ -0.21
PRAME-201ENST00000398741 FZD9O00144 591 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 MED7O43513 233 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 FAM189A1O60320 539 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 FARP2O94887 1054 aaPredicted RBP13.75□□□□□ -0.21
PRAME-201ENST00000398741 TARSP26639 723 aaKnown RBP13.75□□□□□ -0.21
PRAME-201ENST00000398741 SSTR1P30872 391 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 PSMC4P43686 418 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 GDF10P55107 478 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 PSMC1P62191 440 aaKnown RBP13.75□□□□□ -0.21
PRAME-201ENST00000398741 SLC25A11Q02978 314 aaKnown RBP13.75□□□□□ -0.21
PRAME-201ENST00000398741 MAPK6Q16659 721 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 TMEM132AQ24JP5 1023 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 PTPN20Q4JDL3 420 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 PRAMEF18Q5VWM3 479 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 PALM2Q8IXS6 379 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 DHX37Q8IY37 1157 aaKnown RBP13.75□□□□□ -0.21
PRAME-201ENST00000398741 TAB3Q8N5C8 712 aaPredicted RBP13.75□□□□□ -0.21
PRAME-201ENST00000398741 CHST13Q8NET6 341 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 CPT1BQ92523 772 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 ANKRD36BP1Q96IX9 119 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 ACO2Q99798 780 aaKnown RBP13.75□□□□□ -0.21
PRAME-201ENST00000398741 C10orf88Q9H8K7 445 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 SSU72Q9NP77 194 aaKnown RBP13.75□□□□□ -0.21
PRAME-201ENST00000398741 NXF1Q9UBU9 619 aaKnown RBP13.75□□□□□ -0.21
PRAME-201ENST00000398741 FETUBQ9UGM5 382 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 RABGEF1Q9UJ41 708 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 GJA3Q9Y6H8 435 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 DOCK1Q14185 1865 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 SIGLEC16A6NMB1 481 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 LRCH4O75427 683 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 KDELR1P24390 212 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 ASPAP45381 313 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 EFTUD2Q15029 972 aaKnown RBP eCLIP13.75□□□□□ -0.211e-10■■■□□ 18.2
PRAME-201ENST00000398741 FNBP1LQ5T0N5 605 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 IER5Q5VY09 327 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 ANKRD22Q5VYY1 191 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 C3orf62Q6ZUJ4 267 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 BBS12Q6ZW61 710 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 RFX6Q8HWS3 928 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 THNSL1Q8IYQ7 743 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 AGGF1Q8N302 714 aaeCLIP13.75□□□□□ -0.21
PRAME-201ENST00000398741 FBXO36Q8NEA4 188 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 JOSD2Q8TAC2 188 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 PAFAH2Q99487 392 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 LRMDAQ9H2I8 198 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 CPSF3Q9UKF6 684 aaKnown RBP13.75□□□□□ -0.21
PRAME-201ENST00000398741 SNCAIPQ9Y6H5 919 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 CLUHO75153 1309 aa13.75□□□□□ -0.21
PRAME-201ENST00000398741 COL11A1P12107 1806 aaPredicted RBP13.74□□□□□ -0.21
PRAME-201ENST00000398741 PARP14Q460N5 1801 aa13.74□□□□□ -0.21
PRAME-201ENST00000398741 KRT19P08727 400 aa13.74□□□□□ -0.21
PRAME-201ENST00000398741 ATP2A2P16615 1042 aaKnown RBP13.74□□□□□ -0.21
PRAME-201ENST00000398741 RPL22P35268 128 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms