RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SMIM24O75264 130 aa14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 AP1G2O75843 785 aa14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 F9P00740 461 aa14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 ACO1P21399 889 aaKnown RBP14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 GEMIN4P57678 1058 aaKnown RBP14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 OTUD4Q01804 1114 aaKnown RBP14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 LAMB3Q13751 1172 aa14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 SNX17Q15036 470 aa14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 AMHR2Q16671 573 aa14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 SPOCD1Q6ZMY3 1216 aa14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 DDX27Q96GQ7 796 aaKnown RBP14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 TRIM15Q9C019 465 aa14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 AVENQ9NQS1 362 aaPredicted RBP14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 SETSIPP0DME0 302 aa14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 CATSPERGQ6ZRH7 1159 aa14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 LRRC6Q86X45 466 aa14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 SLC9A9Q8IVB4 645 aa14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 TFB1MQ8WVM0 346 aaKnown RBP14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 CPB2Q96IY4 423 aa14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 FAM161BQ96MY7 647 aa14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 NSMCE4AQ9NXX6 385 aa14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 ITGA11Q9UKX5 1188 aa14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 DLG5Q8TDM6 1919 aa14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 FDFT1P37268 417 aa14.83□□□□□ -0.03
PCDHGA11-201ENST00000398587 GTF2BQ00403 316 aa14.83□□□□□ -0.03
PCDHGA11-201ENST00000398587 NAPEPLDQ6IQ20 393 aa14.83□□□□□ -0.03
PCDHGA11-201ENST00000398587 KRT80Q6KB66 452 aa14.83□□□□□ -0.03
PCDHGA11-201ENST00000398587 KDELC2Q7Z4H8 507 aa14.83□□□□□ -0.03
PCDHGA11-201ENST00000398587 ZC3H15Q8WU90 426 aaKnown RBP14.83□□□□□ -0.03
PCDHGA11-201ENST00000398587 PTPRN2Q92932 1015 aa14.83□□□□□ -0.03
PCDHGA11-201ENST00000398587 ARL8AQ96BM9 186 aa14.83□□□□□ -0.03
PCDHGA11-201ENST00000398587 GLIS2Q9BZE0 524 aaPredicted RBP14.83□□□□□ -0.03
PCDHGA11-201ENST00000398587 DRC3Q9H069 523 aa14.83□□□□□ -0.03
PCDHGA11-201ENST00000398587 THEGQ9P2T0 379 aa14.83□□□□□ -0.03
PCDHGA11-201ENST00000398587 PCDHGC5Q9Y5F6 944 aa14.83□□□□□ -0.03
PCDHGA11-201ENST00000398587 LTN1O94822 1766 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 NT5DC3Q86UY8 548 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 GIPC2Q8TF65 315 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 STAMBPL1Q96FJ0 436 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 ZNF512Q96ME7 567 aaPredicted RBP14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 KLF6Q99612 283 aaPredicted RBP14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 ABHD16BQ9H3Z7 469 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 PCMTD2Q9NV79 361 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 NDE1Q9NXR1 346 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 ORC6Q9Y5N6 252 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 PLA2G6O60733 806 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 THPOP40225 353 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 PTGER2P43116 358 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 USP10Q14694 798 aaKnown RBP14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 HYIQ5T013 277 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 CCDC60Q8IWA6 550 aaPredicted RBP14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 KIRREL3Q8IZU9 778 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 FAM172AQ8WUF8 416 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 CYP39A1Q9NYL5 469 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 ANKRD63C9JTQ0 380 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 PDHXO00330 501 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 TTC39BQ5VTQ0 682 aaPredicted RBP14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 RIOX2Q8IUF8 465 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 RXFP2Q8WXD0 754 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 TSPAN17Q96FV3 270 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 MYCBPQ99417 103 aaPredicted RBP14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 OSMRQ99650 979 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 PORCNQ9H237 461 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 GRID1Q9ULK0 1009 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 BARX2Q9UMQ3 279 aaPredicted RBP14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 USP18Q9UMW8 372 aa14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 PRG3Q9Y2Y8 225 aaPredicted RBP14.83□□□□□ -0.04
PCDHGA11-201ENST00000398587 CYB561D2O14569 222 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 CSDE1O75534 798 aaKnown RBP14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 HMBSP08397 361 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 PPP3CAQ08209 521 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 CDC26Q8NHZ8 85 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 SLITRK1Q96PX8 696 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 ASTN1O14525 1302 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 ADM5C9JUS6 153 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 DPYSL4O14531 572 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 ITGB5P18084 799 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 GRIK4Q16099 956 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 MGAT5BQ3V5L5 792 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 FBXO47Q5MNV8 452 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 LVRNQ6Q4G3 990 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 TAS2R42Q7RTR8 314 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 TRPM8Q7Z2W7 1104 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 CREG2Q8IUH2 290 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 PARP9Q8IXQ6 854 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 EMC1Q8N766 993 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 CALML6Q8TD86 181 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 ZNF669Q96BR6 464 aaPredicted RBP14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 TMBIM4Q9HC24 238 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 NPHS2Q9NP85 383 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 FARP1Q9Y4F1 1045 aaPredicted RBP14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 VGLL3A8MV65 326 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 SPATA31C1P0DKV0 1188 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 RAP1GAPP47736 663 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 ESRRGP62508 458 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 ADGRF2Q8IZF7 708 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 ACTL9Q8TC94 416 aa14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 SEPT5Q99719 369 aaPredicted RBP14.82□□□□□ -0.04
PCDHGA11-201ENST00000398587 CDC42EP4Q9H3Q1 356 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms