RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 ZNF609O15014 1411 aa2.84□□□□□ -1.96
CHD9-202ENST00000398510 TCP10L2B9ZVM9 353 aa2.84□□□□□ -1.96
CHD9-202ENST00000398510 JUNDP17535 347 aa2.84□□□□□ -1.96
CHD9-202ENST00000398510 TLX1P31314 330 aaPredicted RBP2.84□□□□□ -1.96
CHD9-202ENST00000398510 THOP1P52888 689 aa2.84□□□□□ -1.96
CHD9-202ENST00000398510 ACSM2AQ08AH3 577 aa2.84□□□□□ -1.96
CHD9-202ENST00000398510 PDAP1Q13442 181 aaKnown RBP2.84□□□□□ -1.96
CHD9-202ENST00000398510 TSTA3Q13630 321 aaPredicted RBP2.84□□□□□ -1.96
CHD9-202ENST00000398510 PDK1Q15118 436 aa2.84□□□□□ -1.96
CHD9-202ENST00000398510 PTPN21Q16825 1174 aa2.84□□□□□ -1.96
CHD9-202ENST00000398510 CHST3Q7LGC8 479 aa2.84□□□□□ -1.96
CHD9-202ENST00000398510 SGMS1Q86VZ5 419 aa2.84□□□□□ -1.96
CHD9-202ENST00000398510 TMEM86AQ8N2M4 240 aa2.84□□□□□ -1.96
CHD9-202ENST00000398510 ATL1Q8WXF7 558 aa2.84□□□□□ -1.96
CHD9-202ENST00000398510 CCT7Q99832 543 aa2.84□□□□□ -1.96
CHD9-202ENST00000398510 LXNQ9BS40 222 aa2.84□□□□□ -1.96
CHD9-202ENST00000398510 RAB11FIP5Q9BXF6 653 aa2.84□□□□□ -1.96
CHD9-202ENST00000398510 NFKBIZQ9BYH8 718 aa2.84□□□□□ -1.96
CHD9-202ENST00000398510 RACGAP1Q9H0H5 632 aa2.84□□□□□ -1.96
CHD9-202ENST00000398510 BRD9Q9H8M2 597 aa2.84□□□□□ -1.96
CHD9-202ENST00000398510 RAB9BQ9NP90 201 aa2.84□□□□□ -1.96
CHD9-202ENST00000398510 AIPL1Q9NZN9 384 aa2.84□□□□□ -1.96
CHD9-202ENST00000398510 H2AFY2Q9P0M6 372 aaPredicted RBP2.84□□□□□ -1.96
CHD9-202ENST00000398510 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 MAPK13O15264 365 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 NR3C2P08235 984 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ALOX15P16050 662 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 IFNAR1P17181 557 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 S100A7P31151 101 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 RAB30Q15771 203 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 PAGE2Q7Z2X7 111 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 RHPN2Q8IUC4 686 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 PHACTR4Q8IZ21 702 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 CYP4Z2PQ8N1L4 340 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 LRRC43Q8N309 656 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 LZTR1Q8N653 840 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ZSCAN18Q8TBC5 510 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 CNOT6LQ96LI5 555 aaKnown RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 RPRD1AQ96P16 312 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 C2orf49Q9BVC5 232 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 ING2Q9H160 280 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 GBA2Q9HCG7 927 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 KLHL28Q9NXS3 571 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 GTSE1Q9NYZ3 720 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ITGB1BP2Q9UKP3 347 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 AAR2Q9Y312 384 aaKnown RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 DLEC1Q9Y238 1755 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 NFAT5O94916 1531 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 A0A087WUV0 522 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 RASA4BC9J798 803 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 NDUFS2O75306 463 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 MICAL2O94851 1124 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ADH1AP07327 375 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ACADLP28330 430 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 RUNX1T1Q06455 604 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 STX4Q12846 297 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 PLCL1Q15111 1095 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 Q3C1V9 767 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 TRMT1LQ7Z2T5 733 aaKnown RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 RHOT1Q8IXI2 618 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ATP6V0D2Q8N8Y2 350 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 FBXO22Q8NEZ5 403 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 SERPINB11Q96P15 392 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 CNPPD1Q9BV87 410 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 SLC45A1Q9Y2W3 748 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 SNX14Q9Y5W7 946 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 LOC285556D6RIA3 1793 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ROBO2Q9HCK4 1378 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 PRR23D1E9PI22 279 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 F8VZ95 297 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 PRR23D2P0DMB1 279 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 WARSP23381 471 aaKnown RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 NAMPTP43490 491 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 TAF6P49848 677 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 BCAP31P51572 246 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 CASP6P55212 293 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 HSD17B7P56937 341 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 NAB1Q13506 487 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 NCF4Q15080 339 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 TMEM164Q5U3C3 297 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 SPATA1Q5VX52 437 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 OTOAQ7RTW8 1153 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 DPP10Q8N608 796 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 NR1H4Q96RI1 486 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 VAT1Q99536 393 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 PCBD2Q9H0N5 130 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ALDH8A1Q9H2A2 487 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 PIGUQ9H490 435 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 C6orf203Q9P0P8 240 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 AMACRQ9UHK6 382 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 TDRKHQ9Y2W6 561 aaKnown RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 PCDHGA4Q9Y5G9 962 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ARID1AO14497 2285 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 MST1RQ04912 1400 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ANO9A1A5B4 782 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 POTEMA6NI47 508 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 TRPC5OSA6NMA1 111 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 TMEM114B3SHH9 223 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 H3BNH8 94 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 TIMM44O43615 452 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms