RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 PPP1R2P3Q6NXS1 205 aa5.17□□□□□ -1.58
SMAD4-202ENST00000398417 MPZL3Q6UWV2 235 aa5.17□□□□□ -1.58
SMAD4-202ENST00000398417 PHF13Q86YI8 300 aaPredicted RBP5.17□□□□□ -1.58
SMAD4-202ENST00000398417 TMEM109Q9BVC6 243 aa5.17□□□□□ -1.58
SMAD4-202ENST00000398417 KDM4CQ9H3R0 1056 aa5.17□□□□□ -1.58
SMAD4-202ENST00000398417 CYP39A1Q9NYL5 469 aa5.17□□□□□ -1.58
SMAD4-202ENST00000398417 PPARGC1AQ9UBK2 798 aaKnown RBP5.17□□□□□ -1.58
SMAD4-202ENST00000398417 ITM2BQ9Y287 266 aa5.17□□□□□ -1.58
SMAD4-202ENST00000398417 BRCA2P51587 3418 aa5.17□□□□□ -1.58
SMAD4-202ENST00000398417 TBC1D12O60347 775 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 SAT1P21673 171 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 TMPRSS15P98073 1019 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 SLC1A5Q15758 541 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 WDR49Q8IV35 697 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 ATP11CQ8NB49 1132 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 DTX3LQ8TDB6 740 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 DDX1Q92499 740 aaKnown RBP5.16□□□□□ -1.58
SMAD4-202ENST00000398417 MAML1Q92585 1016 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 SLC13A1Q9BZW2 595 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 DHX35Q9H5Z1 703 aaKnown RBP5.16□□□□□ -1.58
SMAD4-202ENST00000398417 SNX9Q9Y5X1 595 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 A8MXQ7 604 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 CD48P09326 243 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 RBP3P10745 1247 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 P4HA1P13674 534 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 IER5Q5VY09 327 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 RSPH3Q86UC2 560 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 UNC45BQ8IWX7 931 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 TMCO5AQ8N6Q1 288 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 C12orf50Q8NA57 414 aaPredicted RBP5.16□□□□□ -1.58
SMAD4-202ENST00000398417 USP33Q8TEY7 942 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 DEPDC1BQ8WUY9 529 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 TTC25Q96NG3 672 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 CYTH2Q99418 400 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 hCG_1818297A0A087WSY0 165 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 A0A087WZ62 844 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 CCDC78A2IDD5 438 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 C19orf81C9J6K1 198 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 PLA2G6O60733 806 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 GH1P01241 217 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 NAMPTP43490 491 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 EFNA5P52803 228 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 DRG2P55039 364 aaKnown RBP5.16□□□□□ -1.58
SMAD4-202ENST00000398417 HADHBP55084 474 aaKnown RBP5.16□□□□□ -1.58
SMAD4-202ENST00000398417 PDE1BQ01064 536 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 IFRD2Q12894 506 aaPredicted RBP5.16□□□□□ -1.58
SMAD4-202ENST00000398417 MAP7Q14244 749 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 CCDC62Q6P9F0 684 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 ABHD15Q6UXT9 468 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 MOB2Q70IA6 237 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 KATNAL2Q8IYT4 538 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 PDCD7Q8N8D1 485 aaKnown RBP5.16□□□□□ -1.58
SMAD4-202ENST00000398417 MMP19Q99542 508 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 FDXACB1Q9BRP7 624 aaPredicted RBP5.16□□□□□ -1.58
SMAD4-202ENST00000398417 EPB41L4BQ9H329 900 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 A6NJR5 290 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 ACO1P21399 889 aaKnown RBP5.16□□□□□ -1.58
SMAD4-202ENST00000398417 VCPP55072 806 aaKnown RBP5.16□□□□□ -1.58
SMAD4-202ENST00000398417 FASTKD3Q14CZ7 662 aaKnown RBP5.16□□□□□ -1.58
SMAD4-202ENST00000398417 ZACNQ401N2 412 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 PLEKHA7Q6IQ23 1121 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 B3GNT9Q6UX72 402 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 C3orf62Q6ZUJ4 267 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 CHST13Q8NET6 341 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 EXD1Q8NHP7 514 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 NSMCE1Q8WV22 266 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 TFAP2BQ92481 460 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 FAM167AQ96KS9 214 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 FAM161BQ96MY7 647 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 C2orf40Q9H1Z8 148 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 ST6GALNAC4Q9H4F1 302 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 SYNPO2Q9UMS6 1093 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 SCN8AQ9UQD0 1980 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 TRIM49D1C9J1S8 452 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 SPECC1L-ADORA2AF8WAN1 911 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 PEX14O75381 377 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 EDN1P05305 212 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 UNGP13051 313 aaPredicted RBP5.16□□□□□ -1.58
SMAD4-202ENST00000398417 KCNA2P16389 499 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 FOXN2P32314 431 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 DUOXA2Q1HG44 320 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 PREPLQ4J6C6 727 aaPredicted RBP5.16□□□□□ -1.58
SMAD4-202ENST00000398417 MTDHQ86UE4 582 aaKnown RBP5.16□□□□□ -1.58
SMAD4-202ENST00000398417 ACAP3Q96P50 834 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 TMEM120AQ9BXJ8 343 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 VPS11Q9H270 941 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 MANSC1Q9H8J5 431 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 HEY2Q9UBP5 337 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 NDC80O14777 642 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 KCNN4O15554 427 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 ABCB7O75027 752 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 MTA2O94776 668 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 RFC1P35251 1148 aaPredicted RBP5.16□□□□□ -1.58
SMAD4-202ENST00000398417 BCAR1P56945 870 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 TMEM62Q0P6H9 643 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 MPP2Q14168 576 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 FNBP1LQ5T0N5 605 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 MON1BQ7L1V2 547 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 ECHDC2Q86YB7 292 aa5.16□□□□□ -1.58
SMAD4-202ENST00000398417 FBXO16Q8IX29 292 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms