RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 SLC20A1Q8WUM9 679 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 ZNF606Q8WXB4 792 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 DCUN1D1Q96GG9 259 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 BTBD6Q96KE9 485 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 SLC28A3Q9HAS3 691 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 FAM105AQ9NUU6 356 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 AFF4Q9UHB7 1163 aaKnown RBP16.1■□□□□ 0.17
LSS-202ENST00000397728 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.1■□□□□ 0.17
LSS-202ENST00000397728 WNT7AO00755 349 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 MAP3K6O95382 1288 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 GTF2BQ00403 316 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 RABGAP1LQ5R372 815 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 CARNMT1Q8N4J0 409 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 WDR24Q96S15 920 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 ZNF518BQ9C0D4 1074 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.1■□□□□ 0.171e-14■■□□□ 12.5
LSS-202ENST00000397728 FBXO44Q9H4M3 255 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 DMAP1Q9NPF5 467 aaPredicted RBP16.1■□□□□ 0.17
LSS-202ENST00000397728 HACD3Q9P035 362 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 TFR2Q9UP52 801 aa16.1■□□□□ 0.17
LSS-202ENST00000397728 SF3B1O75533 1304 aaKnown RBP eCLIP16.1■□□□□ 0.171e-6■■■■■ 118.4
LSS-202ENST00000397728 UNCXA6NJT0 531 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 ENDOD1O94919 500 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 POU5F1BQ06416 359 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 PCBP1Q15365 356 aaKnown RBP eCLIP16.09■□□□□ 0.173e-7■■■■■ 27.3
LSS-202ENST00000397728 WSCD1Q658N2 575 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 USP38Q8NB14 1042 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 ACO2Q99798 780 aaKnown RBP16.09■□□□□ 0.17
LSS-202ENST00000397728 TXNRD2Q9NNW7 524 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 VAV3Q9UKW4 847 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 CACNA1FO60840 1977 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 PLIN4Q96Q06 1357 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 CCDC151A5D8V7 595 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 ARF4P18085 180 aaPredicted RBP16.09■□□□□ 0.17
LSS-202ENST00000397728 ADIGQ0VDE8 80 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 SMARCD1Q96GM5 515 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 MS4A14Q96JA4 679 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 GTPBP10A4D1E9 387 aaKnown RBP16.09■□□□□ 0.17
LSS-202ENST00000397728 GRID2IPA4D2P6 1211 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 YWHAQP27348 245 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 RBBP5Q15291 538 aaKnown RBP16.09■□□□□ 0.17
LSS-202ENST00000397728 MID2Q9UJV3 735 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 SNX12Q9UMY4 172 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 ASS1P00966 412 aaKnown RBP16.09■□□□□ 0.17
LSS-202ENST00000397728 AKT1P31749 480 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 IL17AQ16552 155 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 RASAL3Q86YV0 1011 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 CEP120Q8N960 986 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 ELOVL4Q9GZR5 314 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 MED4Q9NPJ6 270 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 GPATCH2LQ9NWQ4 482 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 RPTORQ8N122 1335 aa16.09■□□□□ 0.17
LSS-202ENST00000397728 TTC19Q6DKK2 380 aaPredicted RBP16.08■□□□□ 0.17
LSS-202ENST00000397728 IPMKQ8NFU5 416 aa16.08■□□□□ 0.17
LSS-202ENST00000397728 PBXIP1Q96AQ6 731 aa16.08■□□□□ 0.17
LSS-202ENST00000397728 SNF8Q96H20 258 aa16.08■□□□□ 0.17
LSS-202ENST00000397728 ZMYND8Q9ULU4 1186 aaPredicted RBP16.08■□□□□ 0.17
LSS-202ENST00000397728 NOVA2Q9UNW9 492 aaKnown RBP16.08■□□□□ 0.17
LSS-202ENST00000397728 SNX2O60749 519 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 CKBP12277 381 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 TNFSF9P41273 254 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 SLC25A41Q8N5S1 370 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 SH3KBP1Q96B97 665 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 ADCY6O43306 1168 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 DARSP14868 501 aaKnown RBP16.08■□□□□ 0.16
LSS-202ENST00000397728 JAG1P78504 1218 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 P3H1Q32P28 736 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 CES5AQ6NT32 575 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 EMBQ6PCB8 327 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 FAM71BQ8TC56 605 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 RXFP2Q8WXD0 754 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 DNAJC19Q96DA6 116 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 SLC30A1Q9Y6M5 507 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 ZNF185O15231 689 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 ZNF189O75820 626 aaPredicted RBP16.08■□□□□ 0.16
LSS-202ENST00000397728 FSTL1Q12841 308 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 TRIM67Q6ZTA4 783 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 LRRC8DQ7L1W4 858 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 SLFN11Q7Z7L1 901 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 TRIM42Q8IWZ5 723 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 SPATA4Q8NEY3 305 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 TTC8Q8TAM2 541 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 ZBTB10Q96DT7 871 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 ATXN7L3BQ96GX2 97 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 DUSP9Q99956 384 aaKnown RBP16.08■□□□□ 0.16
LSS-202ENST00000397728 NXF3Q9H4D5 531 aaKnown RBP16.08■□□□□ 0.16
LSS-202ENST00000397728 VPS28Q9UK41 221 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 PADI3Q9ULW8 664 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 DOT1LQ8TEK3 1739 aa16.08■□□□□ 0.16
LSS-202ENST00000397728 FAM187AA6NFU0 413 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 ARHGAP42A6NI28 874 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 BYSLQ13895 437 aaKnown RBP16.07■□□□□ 0.16
LSS-202ENST00000397728 CDKAL1Q5VV42 579 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 ARHGEF19Q8IW93 802 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 SYNDIG1Q9H7V2 258 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 DOLKQ9UPQ8 538 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 RGPD2P0DJD1 1756 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 CCT5P48643 541 aa16.07■□□□□ 0.16
LSS-202ENST00000397728 ZNF200P98182 395 aaPredicted RBP16.07■□□□□ 0.16
LSS-202ENST00000397728 PLD1Q13393 1074 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms