RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 MMEP08473 750 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 PDHA1P08559 390 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 HSPA1AP0DMV8 641 aaKnown RBP7.27□□□□□ -1.25
SMCO1-201ENST00000397537 HSPA1BP0DMV9 641 aaKnown RBP7.27□□□□□ -1.25
SMCO1-201ENST00000397537 ERVK-24P63145 666 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 EIF2B5Q13144 721 aaKnown RBP7.27□□□□□ -1.25
SMCO1-201ENST00000397537 KCNAB2Q13303 367 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 RABEP1Q15276 862 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 GRIK5Q16478 980 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 TRAT1Q6PIZ9 186 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 KLHL24Q6TFL4 600 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 ARHGEF18Q6ZSZ5 1173 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 PLEKHM3Q6ZWE6 761 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 LYSMD3Q7Z3D4 306 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 XAGE3Q8WTP9 111 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 NMD3Q96D46 503 aaKnown RBP7.27□□□□□ -1.25
SMCO1-201ENST00000397537 KTI12Q96EK9 354 aaPredicted RBP7.27□□□□□ -1.25
SMCO1-201ENST00000397537 PRPF18Q99633 342 aaKnown RBP7.27□□□□□ -1.25
SMCO1-201ENST00000397537 EIF2AQ9BY44 585 aaKnown RBP7.27□□□□□ -1.25
SMCO1-201ENST00000397537 FTOQ9C0B1 505 aaKnown RBP eCLIP7.27□□□□□ -1.25
SMCO1-201ENST00000397537 C1orf21Q9H246 121 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 VPS37BQ9H9H4 285 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 SNTG1Q9NSN8 517 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 RGL1Q9NZL6 768 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 C6orf203Q9P0P8 240 aaPredicted RBP7.27□□□□□ -1.25
SMCO1-201ENST00000397537 MINPP1Q9UNW1 487 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 CAMK2AQ9UQM7 478 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 PCDHA3Q9Y5H8 950 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 B3GALT1Q9Y5Z6 326 aa7.27□□□□□ -1.25
SMCO1-201ENST00000397537 MYPNQ86TC9 1320 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 PLEKHH2Q8IVE3 1493 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 GPR75-ASB3A0A0A6YYF3 556 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 NUDT19A8MXV4 375 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 SCDO00767 359 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 C2CD2LO14523 706 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 AURKAO14965 403 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 CD2BP2O95400 341 aaKnown RBP7.26□□□□□ -1.25
SMCO1-201ENST00000397537 F9P00740 461 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 ANXA1P04083 346 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 MSL3P1P0C860 447 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 TPP2P29144 1249 aaPredicted RBP7.26□□□□□ -1.25
SMCO1-201ENST00000397537 STIP1P31948 543 aaKnown RBP7.26□□□□□ -1.25
SMCO1-201ENST00000397537 TCF7P36402 384 aaPredicted RBP7.26□□□□□ -1.25
SMCO1-201ENST00000397537 STARD6P59095 220 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 HTD2P86397 168 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 ZBTB16Q05516 673 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 TNP2Q05952 138 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 NMIQ13287 307 aaPredicted RBP7.26□□□□□ -1.25
SMCO1-201ENST00000397537 MPP3Q13368 585 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 ALG11Q2TAA5 492 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 C2orf76Q3KRA6 126 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 RABL6Q3YEC7 729 aaPredicted RBP7.26□□□□□ -1.25
SMCO1-201ENST00000397537 ZNF805Q5CZA5 627 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 CCDC183Q5T5S1 534 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 PSAPL1Q6NUJ1 521 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 ARHGAP36Q6ZRI8 547 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 USP49Q70CQ1 688 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 IKBIPQ70UQ0 350 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 HEATR3Q7Z4Q2 680 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 SP8Q8IXZ3 490 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 OR52K2Q8NGK3 314 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 OR2I1PQ8NGU4 316 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 FUT8Q9BYC5 575 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 POFUT1Q9H488 388 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 PI4KBQ9UBF8 816 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 ZMAT5Q9UDW3 170 aaKnown RBP7.26□□□□□ -1.25
SMCO1-201ENST00000397537 HSF4Q9ULV5 492 aa7.26□□□□□ -1.25
SMCO1-201ENST00000397537 UBXN8O00124 270 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 THBS1P07996 1170 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 CCDC172P0C7W6 258 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 TYRP14679 529 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 GP5P40197 560 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 BUD31P41223 144 aaPredicted RBP7.25□□□□□ -1.25
SMCO1-201ENST00000397537 SULT1E1P49888 294 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 TGFB2P61812 414 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 AP2B1P63010 937 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 RNF4P78317 190 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 GBE1Q04446 702 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 GPR68Q15743 365 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 TCP11X2Q5H9J9 407 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 GARNL3Q5VVW2 1013 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 MCTP1Q6DN14 999 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 CAVIN1Q6NZI2 390 aaKnown RBP7.25□□□□□ -1.25
SMCO1-201ENST00000397537 ATF7IPQ6VMQ6 1270 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 RRAGAQ7L523 313 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 ANKS1BQ7Z6G8 1248 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 TMEM57Q8N5G2 664 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 ZNF507Q8TCN5 953 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 SMCR8Q8TEV9 937 aaPredicted RBP7.25□□□□□ -1.25
SMCO1-201ENST00000397537 CTNNBL1Q8WYA6 563 aaPredicted RBP7.25□□□□□ -1.25
SMCO1-201ENST00000397537 DLG3Q92796 817 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 SDCCAG3Q96C92 435 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 PGAP3Q96FM1 320 aaPredicted RBP7.25□□□□□ -1.25
SMCO1-201ENST00000397537 SUCLG2Q96I99 432 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 CLMNQ96JQ2 1002 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 CITED2Q99967 270 aaPredicted RBP7.25□□□□□ -1.25
SMCO1-201ENST00000397537 THUMPD3Q9BV44 507 aaKnown RBP7.25□□□□□ -1.25
SMCO1-201ENST00000397537 AP5M1Q9H0R1 490 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 MID1IP1Q9NPA3 183 aa7.25□□□□□ -1.25
SMCO1-201ENST00000397537 ACTR3BQ9P1U1 418 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms