RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 ETS2P15036 469 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 TCF3P15923 654 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 ALOX15P16050 662 aaPredicted RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 TARSP26639 723 aaKnown RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 EPHB2P29323 1055 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 SERPINB3P29508 390 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 ATP5DP30049 168 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 TNFSF9P41273 254 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 HIRAP54198 1017 aaPredicted RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 RTP1P59025 263 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 HPCAP84074 193 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 PRKCEQ02156 737 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 CNTN2Q02246 1040 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 CYP24A1Q07973 514 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 AP1B1Q10567 949 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 BTG3Q14201 252 aaPredicted RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 RCN1Q15293 331 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 SIX1Q15475 284 aaPredicted RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 BRDTQ58F21 947 aaPredicted RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 WDR44Q5JSH3 913 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 CFAP157Q5JU67 520 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 CYP4A22Q5TCH4 519 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 TXNRD3NBQ6F5E7 133 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 ACAD10Q6JQN1 1059 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 C11orf63Q6NUN7 778 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 OLFML1Q6UWY5 402 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 MARK2Q7KZI7 788 aaKnown RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 DEFB132Q7Z7B7 95 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 ECHDC2Q86YB7 292 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 GPD1LQ8N335 351 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 OR5B17Q8NGF7 314 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.27□□□□□ -1.57
SSR1-202ENST00000397511 LRRN4Q8WUT4 740 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 NAT14Q8WUY8 206 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 CKAP2Q8WWK9 683 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 DDX1Q92499 740 aaKnown RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 CD101Q93033 1021 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 ERP27Q96DN0 273 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 MAML3Q96JK9 1138 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 TGS1Q96RS0 853 aaKnown RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 WRNIP1Q96S55 665 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 TMEM109Q9BVC6 243 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 TBC1D10AQ9BXI6 508 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 BRD8Q9H0E9 1235 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 WNT8AQ9H1J5 351 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 MYLK2Q9H1R3 596 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 AAASQ9NRG9 546 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 FBXO40Q9UH90 709 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 ANAPC5Q9UJX4 755 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 GTF3C4Q9UKN8 822 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 TMEM98Q9Y2Y6 226 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 FAM187AA6NFU0 413 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 VWA5AO00534 786 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 MAPK13O15264 365 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 TP73O15350 636 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 SLC26A4O43511 780 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 ZBED4O75132 1171 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 DCTN3O75935 186 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 CST3P01034 146 aaPredicted RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 HLA-DRAP01903 254 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 CYP1A1P04798 512 aaPredicted RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 EDN1P05305 212 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 GJB1P08034 283 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 WEE2P0C1S8 567 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 ZCCHC18P0CG32 403 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 SRGAP2CP0DJJ0 459 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 TROVE2P10155 538 aaKnown RBP eCLIP5.27□□□□□ -1.57
SSR1-202ENST00000397511 PRKAR2AP13861 404 aaKnown RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 BRAFP15056 766 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 VAV1P15498 845 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 ANXA13P27216 316 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 GNA15P30679 374 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 NCKAP1LP55160 1127 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 ADARP55265 1226 aaKnown RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 OXCT1P55809 520 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 MPP2Q14168 576 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 FASTKD3Q14CZ7 662 aaKnown RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 R3HDM1Q15032 1099 aaKnown RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 TMED2Q15363 201 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.27□□□□□ -1.57
SSR1-202ENST00000397511 TDRD10Q5VZ19 366 aaKnown RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 TAS1R3Q7RTX0 852 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 MAP4K3Q8IVH8 894 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 C4orf19Q8IY42 314 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 MCOLN2Q8IZK6 566 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 C4orf33Q8N1A6 199 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 ATP11CQ8NB49 1132 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 IRGQQ8WZA9 623 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 STMN2Q93045 179 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 MPP4Q96JB8 637 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 LRRC37BQ96QE4 947 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 ZNF184Q99676 751 aaPredicted RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 OXCT2Q9BYC2 517 aaPredicted RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 FHDC1Q9C0D6 1143 aaPredicted RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 HAPLN2Q9GZV7 340 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 ASCC2Q9H1I8 757 aaPredicted RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 DEFB129Q9H1M3 183 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 C12orf65Q9H3J6 166 aaKnown RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 XPNPEP1Q9NQW7 623 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 PCYOX1Q9UHG3 505 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms