RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 GPC5P78333 572 aa15.55■□□□□ 0.08
SEC13-208ENST00000397109 MORC3Q14149 939 aa15.55■□□□□ 0.08
SEC13-208ENST00000397109 ASTLQ6HA08 431 aaPredicted RBP15.55■□□□□ 0.08
SEC13-208ENST00000397109 TANGO2Q6ICL3 276 aa15.55■□□□□ 0.08
SEC13-208ENST00000397109 GAREM2Q75VX8 874 aa15.55■□□□□ 0.08
SEC13-208ENST00000397109 GPR152Q8TDT2 470 aa15.55■□□□□ 0.08
SEC13-208ENST00000397109 GIPC2Q8TF65 315 aa15.55■□□□□ 0.08
SEC13-208ENST00000397109 SHDQ96IW2 340 aa15.55■□□□□ 0.08
SEC13-208ENST00000397109 MRPL45Q9BRJ2 306 aaKnown RBP15.55■□□□□ 0.08
SEC13-208ENST00000397109 ATXN3LQ9H3M9 355 aa15.55■□□□□ 0.08
SEC13-208ENST00000397109 ZNF334Q9HCZ1 680 aaPredicted RBP15.55■□□□□ 0.08
SEC13-208ENST00000397109 MAN1B1Q9UKM7 699 aa15.55■□□□□ 0.08
SEC13-208ENST00000397109 MUC6Q6W4X9 2439 aa15.55■□□□□ 0.08
SEC13-208ENST00000397109 CLSTN1O94985 981 aa15.54■□□□□ 0.08
SEC13-208ENST00000397109 VNN1O95497 513 aa15.54■□□□□ 0.08
SEC13-208ENST00000397109 EPB41P11171 864 aaKnown RBP15.54■□□□□ 0.08
SEC13-208ENST00000397109 CYP2F1P24903 491 aa15.54■□□□□ 0.08
SEC13-208ENST00000397109 GTF2H1P32780 548 aa15.54■□□□□ 0.08
SEC13-208ENST00000397109 CDR1P51861 262 aa15.54■□□□□ 0.08
SEC13-208ENST00000397109 POTEHQ6S545 545 aa15.54■□□□□ 0.08
SEC13-208ENST00000397109 VSTM1Q6UX27 236 aa15.54■□□□□ 0.08
SEC13-208ENST00000397109 FLCNQ8NFG4 579 aa15.54■□□□□ 0.08
SEC13-208ENST00000397109 ZSCAN18Q8TBC5 510 aaPredicted RBP15.54■□□□□ 0.08
SEC13-208ENST00000397109 MYCBPAPQ8TBZ2 947 aa15.54■□□□□ 0.08
SEC13-208ENST00000397109 DEPDC1BQ8WUY9 529 aa15.54■□□□□ 0.08
SEC13-208ENST00000397109 CEP295NLQ96MC4 621 aa15.54■□□□□ 0.08
SEC13-208ENST00000397109 ZSWIM3Q96MP5 696 aa15.54■□□□□ 0.08
SEC13-208ENST00000397109 UXTQ9UBK9 157 aaPredicted RBP15.54■□□□□ 0.08
SEC13-208ENST00000397109 CA14Q9ULX7 337 aa15.54■□□□□ 0.08
SEC13-208ENST00000397109 KRBA1A5PL33 1030 aa15.53■□□□□ 0.08
SEC13-208ENST00000397109 A8MXQ7 604 aa15.53■□□□□ 0.08
SEC13-208ENST00000397109 NRG2O14511 850 aaPredicted RBP15.53■□□□□ 0.08
SEC13-208ENST00000397109 HCRTO43612 131 aa15.53■□□□□ 0.08
SEC13-208ENST00000397109 STX10O60499 249 aa15.53■□□□□ 0.08
SEC13-208ENST00000397109 ATP2C2O75185 946 aa15.53■□□□□ 0.08
SEC13-208ENST00000397109 PTPN1P18031 435 aaKnown RBP15.53■□□□□ 0.08
SEC13-208ENST00000397109 BMP6P22004 513 aa15.53■□□□□ 0.08
SEC13-208ENST00000397109 RFX1P22670 979 aa15.53■□□□□ 0.08
SEC13-208ENST00000397109 FCARP24071 287 aa15.53■□□□□ 0.08
SEC13-208ENST00000397109 PIK3CAP42336 1068 aa15.53■□□□□ 0.08
SEC13-208ENST00000397109 VCPP55072 806 aaKnown RBP15.53■□□□□ 0.08
SEC13-208ENST00000397109 MCCD1P59942 119 aaPredicted RBP15.53■□□□□ 0.08
SEC13-208ENST00000397109 PSMC1P62191 440 aaKnown RBP15.53■□□□□ 0.08
SEC13-208ENST00000397109 FKBP3Q00688 224 aaKnown RBP15.53■□□□□ 0.08
SEC13-208ENST00000397109 LRRC63Q05C16 580 aa15.53■□□□□ 0.08
SEC13-208ENST00000397109 DDR2Q16832 855 aa15.53■□□□□ 0.08
SEC13-208ENST00000397109 C1orf220Q5T0J3 134 aa15.53■□□□□ 0.08
SEC13-208ENST00000397109 PHLDB3Q6NSJ2 640 aa15.53■□□□□ 0.08
SEC13-208ENST00000397109 ADSSL1Q8N142 457 aa15.53■□□□□ 0.08
SEC13-208ENST00000397109 PLA2G2FQ9BZM2 168 aa15.53■□□□□ 0.08
SEC13-208ENST00000397109 IMPG2Q9BZV3 1241 aa15.53■□□□□ 0.08
SEC13-208ENST00000397109 TASP1Q9H6P5 420 aa15.53■□□□□ 0.08
SEC13-208ENST00000397109 IL21Q9HBE4 155 aa15.53■□□□□ 0.08
SEC13-208ENST00000397109 CRTAC1Q9NQ79 661 aa15.53■□□□□ 0.08
SEC13-208ENST00000397109 ARHGEF3Q9NR81 526 aa15.53■□□□□ 0.08
SEC13-208ENST00000397109 ANO10Q9NW15 660 aa15.53■□□□□ 0.08
SEC13-208ENST00000397109 SOBPA7XYQ1 873 aa15.52■□□□□ 0.08
SEC13-208ENST00000397109 STK25O00506 426 aa15.52■□□□□ 0.08
SEC13-208ENST00000397109 PSMA7O14818 248 aa15.52■□□□□ 0.08
SEC13-208ENST00000397109 ASS1P00966 412 aaKnown RBP15.52■□□□□ 0.08
SEC13-208ENST00000397109 HLA-DRAP01903 254 aa15.52■□□□□ 0.08
SEC13-208ENST00000397109 HMGA1P17096 107 aaKnown RBP15.52■□□□□ 0.08
SEC13-208ENST00000397109 NPR3P17342 541 aa15.52■□□□□ 0.08
SEC13-208ENST00000397109 DDX6P26196 483 aaKnown RBP eCLIP15.52■□□□□ 0.083e-6■□□□□ 8.8
SEC13-208ENST00000397109 WEE1P30291 646 aa15.52■□□□□ 0.08
SEC13-208ENST00000397109 STX1AQ16623 288 aa15.52■□□□□ 0.08
SEC13-208ENST00000397109 GPR158Q5T848 1215 aa15.52■□□□□ 0.08
SEC13-208ENST00000397109 SCN4BQ8IWT1 228 aa15.52■□□□□ 0.08
SEC13-208ENST00000397109 CCDC150Q8NCX0 1101 aa15.52■□□□□ 0.08
SEC13-208ENST00000397109 MYLPFQ96A32 169 aa15.52■□□□□ 0.08
SEC13-208ENST00000397109 TRIM44Q96DX7 344 aaPredicted RBP15.52■□□□□ 0.08
SEC13-208ENST00000397109 TRMT2BQ96GJ1 504 aaKnown RBP15.52■□□□□ 0.08
SEC13-208ENST00000397109 DHTKD1Q96HY7 919 aaPredicted RBP15.52■□□□□ 0.08
SEC13-208ENST00000397109 SPATA17Q96L03 361 aa15.52■□□□□ 0.08
SEC13-208ENST00000397109 TRMT61BQ9BVS5 477 aaKnown RBP15.52■□□□□ 0.08
SEC13-208ENST00000397109 NAT10Q9H0A0 1025 aaKnown RBP15.52■□□□□ 0.08
SEC13-208ENST00000397109 SLC38A8A6NNN8 435 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 SLC16A3O15427 465 aaKnown RBP15.52■□□□□ 0.07
SEC13-208ENST00000397109 NOL4O94818 638 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 F11P03951 625 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 PSMC3P17980 439 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 AOC1P19801 751 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 CCNE1P24864 410 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 GCLMP48507 274 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 GPR15P49685 360 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 NLRP12P59046 1061 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 CYP27A1Q02318 531 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 PRKCQQ04759 706 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 SLC44A4Q53GD3 710 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 MDH1BQ5I0G3 518 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 ANKRD40Q6AI12 368 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 ARID3BQ8IVW6 561 aaPredicted RBP15.52■□□□□ 0.07
SEC13-208ENST00000397109 MFSD6LQ8IWD5 586 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 ZC3H3Q8IXZ2 948 aaKnown RBP15.52■□□□□ 0.07
SEC13-208ENST00000397109 B3GALNT2Q8NCR0 500 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 PCED1BQ96HM7 432 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 TNIP3Q96KP6 325 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 MYRFLQ96LU7 910 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 SMYD3Q9H7B4 428 aa15.52■□□□□ 0.07
SEC13-208ENST00000397109 BRD9Q9H8M2 597 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 187.7 ms