RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 DNAJC12Q9UKB3 198 aa11.29□□□□□ -0.6
NUP98-205ENST00000397007 DOCK4Q8N1I0 1966 aa11.29□□□□□ -0.6
NUP98-205ENST00000397007 HUS1O60921 280 aa11.29□□□□□ -0.6
NUP98-205ENST00000397007 LCA5LO95447 670 aa11.29□□□□□ -0.6
NUP98-205ENST00000397007 OLFM2O95897 454 aa11.29□□□□□ -0.6
NUP98-205ENST00000397007 URODP06132 367 aa11.29□□□□□ -0.6
NUP98-205ENST00000397007 UNGP13051 313 aaPredicted RBP11.29□□□□□ -0.6
NUP98-205ENST00000397007 RPL17P18621 184 aaKnown RBP11.29□□□□□ -0.6
NUP98-205ENST00000397007 GNL1P36915 607 aaPredicted RBP11.29□□□□□ -0.6
NUP98-205ENST00000397007 CLEC20AQ6ZU45 233 aa11.29□□□□□ -0.6
NUP98-205ENST00000397007 PPFIBP1Q86W92 1011 aa11.29□□□□□ -0.6
NUP98-205ENST00000397007 PLEKHA4Q9H4M7 779 aa11.29□□□□□ -0.6
NUP98-205ENST00000397007 CYLDQ9NQC7 956 aa11.29□□□□□ -0.6
NUP98-205ENST00000397007 IFNKQ9P0W0 207 aa11.29□□□□□ -0.6
NUP98-205ENST00000397007 ZMYND10O75800 440 aa11.29□□□□□ -0.6
NUP98-205ENST00000397007 EPCAMP16422 314 aa11.29□□□□□ -0.6
NUP98-205ENST00000397007 GPD2P43304 727 aa11.29□□□□□ -0.6
NUP98-205ENST00000397007 RBM10P98175 930 aaKnown RBP11.29□□□□□ -0.6
NUP98-205ENST00000397007 TRPC3Q13507 836 aa11.29□□□□□ -0.6
NUP98-205ENST00000397007 MYLIPQ8WY64 445 aa11.29□□□□□ -0.6
NUP98-205ENST00000397007 MAGEC2Q9UBF1 373 aaPredicted RBP11.29□□□□□ -0.6
NUP98-205ENST00000397007 SOBPA7XYQ1 873 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 BIRC3Q13489 604 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 CNGA2Q16280 664 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 PPP1R26Q5T8A7 1209 aaPredicted RBP11.28□□□□□ -0.6
NUP98-205ENST00000397007 PLPP4Q5VZY2 271 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 PM20D1Q6GTS8 502 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 DEFB123Q8N688 67 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 SPPL2BQ8TCT7 592 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 STK32AQ8WU08 396 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 MYLPFQ96A32 169 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 LSM14BQ9BX40 385 aaKnown RBP11.28□□□□□ -0.6
NUP98-205ENST00000397007 KMT2EQ8IZD2 1858 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 NCK2O43639 380 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 HNRNPA1P09651 372 aaKnown RBP eCLIP11.28□□□□□ -0.6
NUP98-205ENST00000397007 TNNC1P63316 161 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 DSTYKQ6XUX3 929 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 RRAGAQ7L523 313 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 KHSRPQ92945 711 aaKnown RBP eCLIP11.28□□□□□ -0.69e-7■■□□□ 14.5
NUP98-205ENST00000397007 CRACR2AQ9BSW2 395 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 KRT19P08727 400 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 OR4Q2P0C623 313 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 PCSK1P29120 753 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 SOX5P35711 763 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 UBXN1Q04323 297 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 MAPK8IP2Q13387 824 aaPredicted RBP11.28□□□□□ -0.6
NUP98-205ENST00000397007 DRAP1Q14919 205 aaPredicted RBP11.28□□□□□ -0.6
NUP98-205ENST00000397007 CTXN3Q4LDR2 81 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 VSTM1Q6UX27 236 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 NOP9Q86U38 636 aaKnown RBP11.28□□□□□ -0.6
NUP98-205ENST00000397007 C12orf29Q8N999 325 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 TC2NQ8N9U0 490 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 NT5C1AQ9BXI3 368 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 SLC4A5Q9BY07 1137 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 DZANK1Q9NVP4 752 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 INSL5Q9Y5Q6 135 aa11.28□□□□□ -0.6
NUP98-205ENST00000397007 TICRRQ7Z2Z1 1910 aa11.27□□□□□ -0.6
NUP98-205ENST00000397007 ADH1AP07327 375 aa11.27□□□□□ -0.6
NUP98-205ENST00000397007 VDRP11473 427 aa11.27□□□□□ -0.6
NUP98-205ENST00000397007 P4HA1P13674 534 aa11.27□□□□□ -0.6
NUP98-205ENST00000397007 TCF3P15923 654 aa11.27□□□□□ -0.6
NUP98-205ENST00000397007 MFAP3P55082 362 aa11.27□□□□□ -0.6
NUP98-205ENST00000397007 UBASH3AP57075 661 aa11.27□□□□□ -0.6
NUP98-205ENST00000397007 FMO1Q01740 532 aa11.27□□□□□ -0.6
NUP98-205ENST00000397007 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.27□□□□□ -0.6
NUP98-205ENST00000397007 FAM35AQ86V20 835 aa11.27□□□□□ -0.6
NUP98-205ENST00000397007 RBBP8NLQ8NC74 664 aaPredicted RBP11.27□□□□□ -0.6
NUP98-205ENST00000397007 PSMG2Q969U7 264 aa11.27□□□□□ -0.6
NUP98-205ENST00000397007 EMILIN2Q9BXX0 1053 aa11.27□□□□□ -0.6
NUP98-205ENST00000397007 UBE2TQ9NPD8 197 aaPredicted RBP11.27□□□□□ -0.6
NUP98-205ENST00000397007 PUF60Q9UHX1 559 aaKnown RBP11.27□□□□□ -0.6
NUP98-205ENST00000397007 PRRC2BQ5JSZ5 2229 aaKnown RBP11.27□□□□□ -0.61
NUP98-205ENST00000397007 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.27□□□□□ -0.61
NUP98-205ENST00000397007 OR1D2P34982 312 aa11.27□□□□□ -0.61
NUP98-205ENST00000397007 TCEAL1Q15170 157 aa11.27□□□□□ -0.61
NUP98-205ENST00000397007 LEXMQ3ZCV2 418 aa11.27□□□□□ -0.61
NUP98-205ENST00000397007 TCERG1LQ5VWI1 586 aa11.27□□□□□ -0.61
NUP98-205ENST00000397007 GPR149Q86SP6 731 aa11.27□□□□□ -0.61
NUP98-205ENST00000397007 SLC47A2Q86VL8 602 aa11.27□□□□□ -0.61
NUP98-205ENST00000397007 DUSP16Q9BY84 665 aa11.27□□□□□ -0.61
NUP98-205ENST00000397007 MTUS1Q9ULD2 1270 aa11.27□□□□□ -0.61
NUP98-205ENST00000397007 MIA3Q5JRA6 1907 aa11.27□□□□□ -0.61
NUP98-205ENST00000397007 ADCY1Q08828 1119 aa11.27□□□□□ -0.61
NUP98-205ENST00000397007 GPRIN1Q7Z2K8 1008 aa11.27□□□□□ -0.61
NUP98-205ENST00000397007 ZNF677Q86XU0 584 aa11.27□□□□□ -0.61
NUP98-205ENST00000397007 ANKRD52Q8NB46 1076 aa11.27□□□□□ -0.61
NUP98-205ENST00000397007 ANP32EQ9BTT0 268 aa11.27□□□□□ -0.61
NUP98-205ENST00000397007 NUP58Q9BVL2 599 aa11.27□□□□□ -0.61
NUP98-205ENST00000397007 ZNF518BQ9C0D4 1074 aa11.27□□□□□ -0.61
NUP98-205ENST00000397007 C19orf67A6NJJ6 358 aa11.26□□□□□ -0.61
NUP98-205ENST00000397007 CYP11B1P15538 503 aa11.26□□□□□ -0.61
NUP98-205ENST00000397007 ACAT1P24752 427 aaKnown RBP11.26□□□□□ -0.61
NUP98-205ENST00000397007 MAPRE1Q15691 268 aaKnown RBP11.26□□□□□ -0.61
NUP98-205ENST00000397007 PPP1R15BQ5SWA1 713 aa11.26□□□□□ -0.61
NUP98-205ENST00000397007 SPECC1LQ69YQ0 1117 aa11.26□□□□□ -0.61
NUP98-205ENST00000397007 KIAA1841Q6NSI8 718 aa11.26□□□□□ -0.61
NUP98-205ENST00000397007 BEND5Q7L4P6 421 aa11.26□□□□□ -0.61
NUP98-205ENST00000397007 TMEM110Q86TL2 294 aa11.26□□□□□ -0.61
NUP98-205ENST00000397007 PCDHB18PQ96TA0 734 aa11.26□□□□□ -0.61
NUP98-205ENST00000397007 ACP6Q9NPH0 428 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms