RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 TTC39CQ8N584 583 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 ACTL9Q8TC94 416 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 GTF3C2Q8WUA4 911 aaPredicted RBP12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 ASB7Q9H672 318 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 LRRC4CQ9HCJ2 640 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 KLHL14Q9P2G3 628 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 CCL15-CCL14A0A0B4J2E2 113 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 SIGLEC16A6NMB1 481 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 BHMG1C9JSJ3 638 aaPredicted RBP12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 GPR25O00155 361 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 MTM1Q13496 603 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 CCL15Q16663 113 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 TGS1Q96RS0 853 aaKnown RBP12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 HERPUD2Q9BSE4 406 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 IQCGQ9H095 443 aaKnown RBP12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 MINDY3Q9H8M7 445 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 hCG_1818297A0A087WSY0 165 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 NPTXRO95502 500 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 YWHAGP61981 247 aaKnown RBP eCLIP12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 NR1H3Q13133 447 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 TFDP2Q14188 446 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 EXOC3L1Q86VI1 746 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 JOSD2Q8TAC2 188 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 GCOM2Q9BZD3 368 aaPredicted RBP12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 R3HDMLQ9H3Y0 253 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 CYP3A43Q9HB55 503 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 FAM49BQ9NUQ9 324 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 PCDHGC3Q9UN70 934 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 NAALADL1Q9UQQ1 740 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 HEY1Q9Y5J3 304 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 PECAM1P16284 738 aaPredicted RBP12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 GPD1P21695 349 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 CA4P22748 312 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 CTCFP49711 727 aaPredicted RBP12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 SLC8A3P57103 927 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 KIZQ2M2Z5 673 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 PPP6R3Q5H9R7 873 aaPredicted RBP12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 C1orf228Q6PIY5 440 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 ZCCHC9Q8N567 271 aaKnown RBP12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 C1orf127Q8N9H9 656 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 C10orf88Q9H8K7 445 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 KIAA1217Q5T5P2 1943 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 RBBP6Q7Z6E9 1792 aaKnown RBP12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 PDHXO00330 501 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 SDC4P31431 198 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 MSH2P43246 934 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 NDST1P52848 882 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 ROR1Q01973 937 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 ZNF268Q14587 947 aaPredicted RBP12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 MORF4L2Q15014 288 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 GOLGA7BQ2TAP0 167 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 USP50Q70EL3 339 aaPredicted RBP12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 ALLCQ8N6M5 410 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 BEST2Q8NFU1 509 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 SPATA18Q8TC71 538 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 TMEM109Q9BVC6 243 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 USP18Q9UMW8 372 aa12.14□□□□□ -0.47
PDXDC1-202ENST00000396410 A6NJR5 290 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 RBP3P10745 1247 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 CETPP11597 493 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 ZNF132P52740 706 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 SETDB1Q15047 1291 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 SYCP2LQ5T4T6 812 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 FAM71DQ8N9W8 422 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 VTA1Q9NP79 307 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 FGFR1OP2Q9NVK5 253 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 CNTN6Q9UQ52 1028 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 CNMDO75829 334 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 TMEM63BQ5T3F8 832 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 UBAP2Q5T6F2 1119 aaKnown RBP12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 SCARA3Q6AZY7 606 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 FAM47EQ6ZV65 393 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 CTAGE3PQ8IX95 158 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 SNX25Q9H3E2 840 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 RSAD1Q9HA92 442 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 BARX2Q9UMQ3 279 aaPredicted RBP12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 A8MXQ7 604 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 C22orf31O95567 290 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 ARF4P18085 180 aaPredicted RBP12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 DRD4P21917 467 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 GRIK4Q16099 956 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 CNGA2Q16280 664 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 DGKDQ16760 1214 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 PPIL6Q8IXY8 311 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 LRRC8CQ8TDW0 803 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 FAF2Q96CS3 445 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 CPXM1Q96SM3 734 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 EPB41L4BQ9H329 900 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 PCDH9Q9HC56 1237 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 ITGA11Q9UKX5 1188 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 DOCK5Q9H7D0 1870 aa12.13□□□□□ -0.47
PDXDC1-202ENST00000396410 DYNC1LI2O43237 492 aaPredicted RBP12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 MYCNP04198 464 aaPredicted RBP12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 RAD23BP54727 409 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 GPR162Q16538 588 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 PNMA8AQ86V59 439 aaPredicted RBP12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 ATP11CQ8NB49 1132 aa12.12□□□□□ -0.47
PDXDC1-202ENST00000396410 PITPNM3Q9BZ71 974 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms