RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 CGNQ9P2M7 1197 aaKnown RBP17.54■□□□□ 0.4
DDR1-229ENST00000396342 MYH11P35749 1972 aa17.53■□□□□ 0.4
DDR1-229ENST00000396342 NRG2O14511 850 aaPredicted RBP17.53■□□□□ 0.4
DDR1-229ENST00000396342 YEATS4O95619 227 aa17.53■□□□□ 0.4
DDR1-229ENST00000396342 F11P03951 625 aa17.53■□□□□ 0.4
DDR1-229ENST00000396342 CCDC192P0DO97 292 aa17.53■□□□□ 0.4
DDR1-229ENST00000396342 DLATP10515 647 aaKnown RBP17.53■□□□□ 0.4
DDR1-229ENST00000396342 DRD1P21728 446 aa17.53■□□□□ 0.4
DDR1-229ENST00000396342 CASP5P51878 434 aa17.53■□□□□ 0.4
DDR1-229ENST00000396342 CYP27A1Q02318 531 aa17.53■□□□□ 0.4
DDR1-229ENST00000396342 FAM160A1Q05DH4 1040 aa17.53■□□□□ 0.4
DDR1-229ENST00000396342 FAM26FQ5R3K3 315 aa17.53■□□□□ 0.4
DDR1-229ENST00000396342 CEP57L1Q8IYX8 460 aa17.53■□□□□ 0.4
DDR1-229ENST00000396342 ZNF687Q8N1G0 1237 aa17.53■□□□□ 0.4
DDR1-229ENST00000396342 LINC00301Q8NCQ3 95 aa17.53■□□□□ 0.4
DDR1-229ENST00000396342 SYT15Q9BQS2 421 aa17.53■□□□□ 0.4
DDR1-229ENST00000396342 RTKNQ9BST9 563 aa17.53■□□□□ 0.4
DDR1-229ENST00000396342 MKNK1Q9BUB5 465 aa17.53■□□□□ 0.4
DDR1-229ENST00000396342 IKZF4Q9H2S9 585 aa17.53■□□□□ 0.4
DDR1-229ENST00000396342 EBF3Q9H4W6 596 aa17.53■□□□□ 0.4
DDR1-229ENST00000396342 IL21Q9HBE4 155 aa17.53■□□□□ 0.4
DDR1-229ENST00000396342 DUS2Q9NX74 493 aaKnown RBP17.53■□□□□ 0.4
DDR1-229ENST00000396342 TRPM5Q9NZQ8 1165 aa17.53■□□□□ 0.4
DDR1-229ENST00000396342 TRIP11Q15643 1979 aa17.53■□□□□ 0.4
DDR1-229ENST00000396342 ATP8B3O60423 1300 aa17.52■□□□□ 0.4
DDR1-229ENST00000396342 UBE4BO95155 1302 aa17.52■□□□□ 0.4
DDR1-229ENST00000396342 TRIM66O15016 1216 aa17.52■□□□□ 0.4
DDR1-229ENST00000396342 NOL4O94818 638 aa17.52■□□□□ 0.4
DDR1-229ENST00000396342 HOXA6P31267 233 aa17.52■□□□□ 0.4
DDR1-229ENST00000396342 MAGEA11P43364 429 aa17.52■□□□□ 0.4
DDR1-229ENST00000396342 ME1P48163 572 aa17.52■□□□□ 0.4
DDR1-229ENST00000396342 PPP3CCP48454 512 aa17.52■□□□□ 0.4
DDR1-229ENST00000396342 SPEM2Q0P670 501 aa17.52■□□□□ 0.4
DDR1-229ENST00000396342 GOLGA5Q8TBA6 731 aa17.52■□□□□ 0.4
DDR1-229ENST00000396342 USP13Q92995 863 aaPredicted RBP17.52■□□□□ 0.4
DDR1-229ENST00000396342 ACDQ96AP0 544 aa17.52■□□□□ 0.4
DDR1-229ENST00000396342 P2RY13Q9BPV8 354 aa17.52■□□□□ 0.4
DDR1-229ENST00000396342 TRIM9Q9C026 710 aa17.52■□□□□ 0.4
DDR1-229ENST00000396342 DLL3Q9NYJ7 618 aa17.52■□□□□ 0.4
DDR1-229ENST00000396342 TFIP11Q9UBB9 837 aaKnown RBP17.52■□□□□ 0.4
DDR1-229ENST00000396342 CFAP45Q9UL16 551 aa17.52■□□□□ 0.4
DDR1-229ENST00000396342 MIA3Q5JRA6 1907 aa17.51■□□□□ 0.39
DDR1-229ENST00000396342 SHISA7A6NL88 538 aa17.51■□□□□ 0.39
DDR1-229ENST00000396342 HMGA1P17096 107 aaKnown RBP17.51■□□□□ 0.39
DDR1-229ENST00000396342 PFKLP17858 780 aa17.51■□□□□ 0.39
DDR1-229ENST00000396342 HDCP19113 662 aa17.51■□□□□ 0.39
DDR1-229ENST00000396342 GNL1P36915 607 aaPredicted RBP17.51■□□□□ 0.39
DDR1-229ENST00000396342 CYP2J2P51589 502 aa17.51■□□□□ 0.39
DDR1-229ENST00000396342 PSMD2Q13200 908 aa17.51■□□□□ 0.39
DDR1-229ENST00000396342 MTF1Q14872 753 aa17.51■□□□□ 0.39
DDR1-229ENST00000396342 SNRNP35Q16560 246 aaKnown RBP17.51■□□□□ 0.39
DDR1-229ENST00000396342 SDHAF4Q5VUM1 108 aa17.51■□□□□ 0.39
DDR1-229ENST00000396342 LMBRD2Q68DH5 695 aaPredicted RBP17.51■□□□□ 0.39
DDR1-229ENST00000396342 ATL3Q6DD88 541 aa17.51■□□□□ 0.39
DDR1-229ENST00000396342 Q6ZS52 159 aa17.51■□□□□ 0.39
DDR1-229ENST00000396342 C12orf50Q8NA57 414 aaPredicted RBP17.51■□□□□ 0.39
DDR1-229ENST00000396342 XXYLT1Q8NBI6 393 aa17.51■□□□□ 0.39
DDR1-229ENST00000396342 RDH13Q8NBN7 331 aa17.51■□□□□ 0.39
DDR1-229ENST00000396342 OR6B3Q8NGW1 331 aa17.51■□□□□ 0.39
DDR1-229ENST00000396342 NETO1Q8TDF5 533 aa17.51■□□□□ 0.39
DDR1-229ENST00000396342 DNAI2Q9GZS0 605 aa17.51■□□□□ 0.39
DDR1-229ENST00000396342 TMLHEQ9NVH6 421 aa17.51■□□□□ 0.39
DDR1-229ENST00000396342 DOCK6Q96HP0 2047 aa17.5■□□□□ 0.39
DDR1-229ENST00000396342 TRDMT1O14717 391 aaKnown RBP17.5■□□□□ 0.39
DDR1-229ENST00000396342 NFATC1O95644 943 aa17.5■□□□□ 0.39
DDR1-229ENST00000396342 ABL1P00519 1130 aa17.5■□□□□ 0.39
DDR1-229ENST00000396342 PDGFRBP09619 1106 aa17.5■□□□□ 0.39
DDR1-229ENST00000396342 FAM163BP0C2L3 166 aa17.5■□□□□ 0.39
DDR1-229ENST00000396342 GPR15P49685 360 aa17.5■□□□□ 0.39
DDR1-229ENST00000396342 CCINQ13939 588 aa17.5■□□□□ 0.39
DDR1-229ENST00000396342 SOWAHAQ2M3V2 549 aa17.5■□□□□ 0.39
DDR1-229ENST00000396342 TMEM196Q5HYL7 178 aa17.5■□□□□ 0.39
DDR1-229ENST00000396342 TDRD10Q5VZ19 366 aaKnown RBP17.5■□□□□ 0.39
DDR1-229ENST00000396342 TXNDC11Q6PKC3 985 aa17.5■□□□□ 0.39
DDR1-229ENST00000396342 CACNA2D4Q7Z3S7 1137 aa17.5■□□□□ 0.39
DDR1-229ENST00000396342 WDR5BQ86VZ2 330 aa17.5■□□□□ 0.39
DDR1-229ENST00000396342 CBWD2Q8IUF1 395 aa17.5■□□□□ 0.39
DDR1-229ENST00000396342 CAMKK1Q8N5S9 505 aa17.5■□□□□ 0.39
DDR1-229ENST00000396342 DDX1Q92499 740 aaKnown RBP17.5■□□□□ 0.39
DDR1-229ENST00000396342 CCDC47Q96A33 483 aaKnown RBP17.5■□□□□ 0.39
DDR1-229ENST00000396342 CCDC127Q96BQ5 260 aa17.5■□□□□ 0.39
DDR1-229ENST00000396342 MYRFLQ96LU7 910 aa17.5■□□□□ 0.39
DDR1-229ENST00000396342 LRRC3BQ96PB8 259 aa17.5■□□□□ 0.39
DDR1-229ENST00000396342 FAM83CQ9BQN1 747 aa17.5■□□□□ 0.39
DDR1-229ENST00000396342 KBTBD4Q9NVX7 518 aa17.5■□□□□ 0.39
DDR1-229ENST00000396342 NCANO14594 1321 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 USP34Q70CQ2 3546 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 NOTCH4Q99466 2003 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 CCDC163A0A0D9SF12 145 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 SLC9A3R1O14745 358 aaPredicted RBP17.49■□□□□ 0.39
DDR1-229ENST00000396342 GABRDO14764 452 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 EXOC3O60645 756 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 RPP40O75818 363 aaKnown RBP17.49■□□□□ 0.39
DDR1-229ENST00000396342 TDGF1P13385 188 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 P4HA1P13674 534 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 WARSP23381 471 aaKnown RBP17.49■□□□□ 0.39
DDR1-229ENST00000396342 AP3M2P53677 418 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 BIRC3Q13489 604 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 WDR72Q3MJ13 1102 aa17.49■□□□□ 0.39
DDR1-229ENST00000396342 IL31Q6EBC2 164 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms