RNA–Protein interactions for RNA: ENST00000396251.1

XIRP1-202, Transcript of xin actin binding repeat containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene XIRP1, Length 6,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP1-202ENST00000396251 GTF2H1P32780 548 aa12.62□□□□□ -0.39
XIRP1-202ENST00000396251 MAP3K7CLP57077 242 aa12.62□□□□□ -0.39
XIRP1-202ENST00000396251 EXOSC10Q01780 885 aaKnown RBP12.62□□□□□ -0.39
XIRP1-202ENST00000396251 CAMK2GQ13555 558 aaPredicted RBP12.62□□□□□ -0.39
XIRP1-202ENST00000396251 TP53BP2Q13625 1128 aa12.62□□□□□ -0.39
XIRP1-202ENST00000396251 MMS22LQ6ZRQ5 1243 aa12.62□□□□□ -0.39
XIRP1-202ENST00000396251 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.62□□□□□ -0.39
XIRP1-202ENST00000396251 GBP7Q8N8V2 638 aaPredicted RBP12.62□□□□□ -0.39
XIRP1-202ENST00000396251 WDR48Q8TAF3 677 aa12.62□□□□□ -0.39
XIRP1-202ENST00000396251 ARNTL2Q8WYA1 636 aa12.62□□□□□ -0.39
XIRP1-202ENST00000396251 GLMNQ92990 594 aa12.62□□□□□ -0.39
XIRP1-202ENST00000396251 CYFIP2Q96F07 1278 aa12.62□□□□□ -0.39
XIRP1-202ENST00000396251 C1QTNF3-AMACRE9PGA6 284 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 HPCAP84074 193 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 C6orf118Q5T5N4 469 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.61□□□□□ -0.39
XIRP1-202ENST00000396251 DNAJC17Q9NVM6 304 aaKnown RBP12.61□□□□□ -0.39
XIRP1-202ENST00000396251 RRN3Q9NYV6 651 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 PKD2L2Q9NZM6 624 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 ATP8A1Q9Y2Q0 1164 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 GRAP2O75791 330 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 EPB42P16452 691 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 ITGALP20701 1170 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 RAP1GDS1P52306 607 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 PDCLQ13371 301 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 ACAD11Q709F0 780 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 CPA6Q8N4T0 437 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 SLC25A41Q8N5S1 370 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 C11orf84Q9BUA3 381 aaPredicted RBP12.61□□□□□ -0.39
XIRP1-202ENST00000396251 ASPSCR1Q9BZE9 553 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 PSMD12O00232 456 aaPredicted RBP12.61□□□□□ -0.39
XIRP1-202ENST00000396251 BAG2O95816 211 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 SETSIPP0DME0 302 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 ZC2HC1CQ53FD0 456 aaPredicted RBP12.61□□□□□ -0.39
XIRP1-202ENST00000396251 NAPEPLDQ6IQ20 393 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 KIRREL3Q8IZU9 778 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 MTBPQ96DY7 904 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 TMA16Q96EY4 203 aaKnown RBP12.61□□□□□ -0.39
XIRP1-202ENST00000396251 DMAP1Q9NPF5 467 aaPredicted RBP12.61□□□□□ -0.39
XIRP1-202ENST00000396251 SMPD4Q9NXE4 827 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 CSH1P0DML2 217 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 CSH2P0DML3 217 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 CAPZA2P47755 286 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 NPTX2P47972 431 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 GEMP55040 296 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 GIT2Q14161 759 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 OTOP2Q7RTS6 562 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 LINC00523Q86TU6 105 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 RNF135Q8IUD6 432 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 SLC35F6Q8N357 371 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 CCNYL1Q8N7R7 359 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 AGAP3Q96P47 875 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 MCEEQ96PE7 176 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 ASB7Q9H672 318 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 CDC23Q9UJX2 597 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 SNCAIPQ9Y6H5 919 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 COL3A1P02461 1466 aaPredicted RBP12.61□□□□□ -0.39
XIRP1-202ENST00000396251 SESN3P58005 492 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 PTK6Q13882 451 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 PHLDB3Q6NSJ2 640 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 ATP11CQ8NB49 1132 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 ADGRE3Q9BY15 652 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 EML4Q9HC35 981 aaKnown RBP12.61□□□□□ -0.39
XIRP1-202ENST00000396251 NMRK1Q9NWW6 199 aa12.61□□□□□ -0.39
XIRP1-202ENST00000396251 FRMD3A2A2Y4 597 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 PDZK1P1A8MUH7 402 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 C5orf58C9J3I9 102 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 MTA2O94776 668 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 AKAP5P24588 427 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 PTPN3P26045 913 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 CDC25CP30307 473 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 C2orf54Q08AI8 447 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 SLC39A12Q504Y0 691 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 SUGP1Q8IWZ8 645 aaKnown RBP12.6□□□□□ -0.39
XIRP1-202ENST00000396251 IGSF6O95976 241 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 TBX4P57082 545 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 RFFLQ8WZ73 363 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 PTPRN2Q92932 1015 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 PGLYRP2Q96PD5 576 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 MTMR12Q9C0I1 747 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 Q9H521 79 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 WDR41Q9HAD4 459 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 CBX4O00257 560 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 CUL2Q13617 745 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 BOLA3Q53S33 107 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 C4orf22Q6V702 233 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 FMR1NBQ8N0W7 255 aaPredicted RBP12.6□□□□□ -0.39
XIRP1-202ENST00000396251 IPMKQ8NFU5 416 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 EPB41L5Q9HCM4 733 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 ZFATQ9P243 1243 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 PDE2AO00408 941 aaPredicted RBP12.6□□□□□ -0.39
XIRP1-202ENST00000396251 MZF1P28698 734 aaPredicted RBP12.6□□□□□ -0.39
XIRP1-202ENST00000396251 BST2Q10589 180 aaKnown RBP12.6□□□□□ -0.39
XIRP1-202ENST00000396251 PDE1CQ14123 709 aaPredicted RBP12.6□□□□□ -0.39
XIRP1-202ENST00000396251 SPATA18Q8TC71 538 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 SERPINB11Q96P15 392 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 L3MBTL1Q9Y468 752 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 CCDC78A2IDD5 438 aa12.6□□□□□ -0.39
XIRP1-202ENST00000396251 DUSP11O75319 330 aaKnown RBP12.6□□□□□ -0.39
XIRP1-202ENST00000396251 KRT20P35900 424 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms