RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 IL21Q9HBE4 155 aa14.55□□□□□ -0.08
SCAF11-203ENST00000395453 INTS13Q9NVM9 706 aa14.55□□□□□ -0.08
SCAF11-203ENST00000395453 PCDHA7Q9UN72 937 aa14.55□□□□□ -0.08
SCAF11-203ENST00000395453 L1RE1Q9UN81 338 aa14.55□□□□□ -0.08
SCAF11-203ENST00000395453 PIAS3Q9Y6X2 628 aa14.55□□□□□ -0.08
SCAF11-203ENST00000395453 ZNF233A6NK53 670 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 TGFB1I1O43294 461 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 HUS1O60921 280 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 CHRNB1P11230 501 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 GABRR2P28476 465 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 ASIC1P78348 528 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 RBP5P82980 135 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 PKP1Q13835 747 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 MGAT5BQ3V5L5 792 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 RESP18Q5W5W9 173 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 C1orf228Q6PIY5 440 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 CEP68Q76N32 757 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 LIMS2Q7Z4I7 341 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 ARID3BQ8IVW6 561 aaPredicted RBP14.54□□□□□ -0.08
SCAF11-203ENST00000395453 TMEM86AQ8N2M4 240 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 SPATA18Q8TC71 538 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 LEO1Q8WVC0 666 aaPredicted RBP14.54□□□□□ -0.08
SCAF11-203ENST00000395453 FAM84AQ96KN4 292 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 LRRC3BQ96PB8 259 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 HS3ST6Q96QI5 342 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 SEPT5Q99719 369 aaPredicted RBP14.54□□□□□ -0.08
SCAF11-203ENST00000395453 LPIN3Q9BQK8 851 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 MTMR12Q9C0I1 747 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 ATXN3LQ9H3M9 355 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 SLITRK6Q9H5Y7 841 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 KIAA1586Q9HCI6 787 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 TMLHEQ9NVH6 421 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 RCOR1Q9UKL0 485 aa14.54□□□□□ -0.08
SCAF11-203ENST00000395453 DENND4CQ5VZ89 1909 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 TICRRQ7Z2Z1 1910 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 GABRDO14764 452 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 TM4SF5O14894 197 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 ZNF263O14978 683 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 CHADO15335 359 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 PAPSS2O95340 614 aaPredicted RBP14.53□□□□□ -0.08
SCAF11-203ENST00000395453 PROS1P07225 676 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 CDR1P51861 262 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 SNRPFP62306 86 aaKnown RBP14.53□□□□□ -0.08
SCAF11-203ENST00000395453 SRSF5Q13243 272 aaKnown RBP14.53□□□□□ -0.08
SCAF11-203ENST00000395453 LRRC32Q14392 662 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 GAS6Q14393 721 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 SURF1Q15526 300 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 NFE2Q16621 373 aaPredicted RBP14.53□□□□□ -0.08
SCAF11-203ENST00000395453 FOXD4L6Q3SYB3 417 aaPredicted RBP14.53□□□□□ -0.08
SCAF11-203ENST00000395453 FAM26FQ5R3K3 315 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 FOXD4L3Q6VB84 417 aaPredicted RBP14.53□□□□□ -0.08
SCAF11-203ENST00000395453 UNC13DQ70J99 1090 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 CBWD2Q8IUF1 395 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 FAM160A2Q8N612 972 aaPredicted RBP14.53□□□□□ -0.08
SCAF11-203ENST00000395453 TOP6BLQ8N6T0 577 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 C12orf50Q8NA57 414 aaPredicted RBP14.53□□□□□ -0.08
SCAF11-203ENST00000395453 OR5B17Q8NGF7 314 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 MSANTD3Q96H12 275 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 PKMYT1Q99640 499 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 OBP2AQ9NY56 170 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 HSPBP1Q9NZL4 362 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 CFAP45Q9UL16 551 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 PCDHB5Q9Y5E4 795 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 PTPRJQ12913 1337 aa14.53□□□□□ -0.08
SCAF11-203ENST00000395453 NUP210Q8TEM1 1887 aaPredicted RBP14.53□□□□□ -0.08
SCAF11-203ENST00000395453 ASPMQ8IZT6 3477 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 SDK1Q7Z5N4 2213 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 ZZEF1O43149 2961 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 PVALEFA0A1B0GWK0 134 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 HSP90AA1P07900 732 aaKnown RBP14.52□□□□□ -0.08
SCAF11-203ENST00000395453 TMEM191BP0C7N4 346 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 HMGA1P17096 107 aaKnown RBP14.52□□□□□ -0.08
SCAF11-203ENST00000395453 CCNE1P24864 410 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 ME1P48163 572 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 LHX1P48742 406 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 TSPY1Q01534 308 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 BFSP1Q12934 665 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 VEPH1Q14D04 833 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 DUOXA2Q1HG44 320 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 SOWAHAQ2M3V2 549 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 ARHGAP15Q53QZ3 475 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 GPR158Q5T848 1215 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 DPH6Q7L8W6 267 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 TMEM150AQ86TG1 271 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 OSTM1Q86WC4 334 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 FAM200AQ8TCP9 573 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 GIPC2Q8TF65 315 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 NOC3LQ8WTT2 800 aaKnown RBP14.52□□□□□ -0.08
SCAF11-203ENST00000395453 SCFD1Q8WVM8 642 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 ANKRD36BP1Q96IX9 119 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 TASP1Q9H6P5 420 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 ABCB6Q9NP58 842 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 AGPAT3Q9NRZ7 376 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 DDX43Q9NXZ2 648 aaKnown RBP14.52□□□□□ -0.08
SCAF11-203ENST00000395453 ABI2Q9NYB9 513 aaPredicted RBP14.52□□□□□ -0.08
SCAF11-203ENST00000395453 SNX9Q9Y5X1 595 aa14.52□□□□□ -0.08
SCAF11-203ENST00000395453 UBE4BO95155 1302 aa14.52□□□□□ -0.09
SCAF11-203ENST00000395453 FASNP49327 2511 aaKnown RBP14.51□□□□□ -0.09
SCAF11-203ENST00000395453 K7ESF4 209 aa14.51□□□□□ -0.09
SCAF11-203ENST00000395453 F11P03951 625 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms